Id Trinity | TRINITY_DN52477_c1_g2_i8 |
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Name Transcript | Ll_transcript_349155 |
Sequence | ATTTTATTCCTTCTATCATCAACTCTTGCCATTCGCTGAACTTTTGAGTTCCCTCACATCACAACAAAGGTTATTTAACAGAAAAAACTAATCTGATGAC AGTTATAGAAATAGTATTAGAGACTTGTTAGTCAACACAACAAACTCATTTTTGAATTCTCATCACTCTATTGTTTCTCTTCTTCTCTCCTTTCCCCACG TTATGTCGCAAATTAGCCACGGCCACAATAACGAGCCAGCCACCATTCCTGACGGCGATTCACTTCACGCGCCGTCACCGTTCCTTCCATTCGAGCTAAT AACTGAAATCCTCTATAGGGTCCCTGTCAAATTCCTCATTCAATTCAAATGCGTATGCAAGTCTTGGAAAACCCTAATTTCCAATCCCGAATTCGCAAAA AAGCACTTTTCCACCTTTCACCACCACCATCACCTCCTCTTGAGTATCAATGATGCCTTAAACAATTTGATTGTCAAATTGTACTCTTTTCCATCCATAT TCGAAACCCCTCCCCCAATTTCAACTCAGGTTAGTTACCCTTTAAACACTCAAAGTTGTTTCGCTTTCATGGTAGGATCTTGTGATGGAATGCTATGTTT CGCTGGTAGTCTAAACACTGCCCTTTTATGGAACCCCACTATTAGAGTATTCAAAAGGTTGCCACCTTTGGAAAAATACACCATATTTGGGTTTGGTTTT GATCAATGTAGTGATAGTTACAAAGTGGTTGCAATTTTATGCAGTTTGTCTTCCAGTGATGGTGGAAGCGCTTATGTAACTGAAGTTAAGATTCATAATT TGGGTACTGATTCTTGGAGAAGGATCCAGGAATATCCTTATGGTATTCCAACTGGTTTATCGGCGAAATTTGTGAGTGGCACGCT BLAST |
Tissue | pods |
Gene name | LI_gene_193048; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_349155
Blastp | F-box/kelch-repeat protein At3g06240 from Arabidopsis with 29.41% of identity |
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Blastx | F-box/kelch-repeat protein At3g23880 from Arabidopsis with 30.09% of identity |
Eggnog | FBOX(ENOG410ZSG0) |
Kegg | Link to kegg annotations (AT3G06240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439762.1) |
Pfam | F-box domain (PF00646.32) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |