Id Trinity | TRINITY_DN52479_c1_g3_i2 |
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Name Transcript | Ll_transcript_350664 |
Sequence | TGCACGACCTCTGATTAATGTTTGTGACCGTTTTGGATTTGTTCCAGATCTAACTCACTATCTATACGCAAGCAACATGCTTCGCTATATTGAAGGTTAT GTTCAGAAGGTATCATAGTTTGCGTTTATATTGTTCCCTTATCTAATGAGTGCTCTCTTTCCCTCCTCCCCCCTCTCTATGTGCCCTTGTTAGAACTTGT ATCTTGCTTTATAGGTGAACCCAGGGAATGCTCCTTTAGTTGTTGGGCAGCTGCTAGATGATGAGTGTCCTGAAGATTTTATCAAAGGCTTGATTCTTTC TGTTCGTTCATTACTGCCAGTGGAGCCCCTTGTGGAGGAATGTGAGAAGAGGTGGTATCTGTTCTCTAATACTACATATTGTTATTTTGCGTTCTTATTT CTGACTTTCTTTTGGATCTATTTTTGGTGTTCAGGAACCGCCTTCGCTTGCTCACACAGTTCTTGGAACATCTTGTATCTGAGGGAAGCCAGGATGTACA TGTTCACAATGCACTGGGTAAAATCATCATTGATAGCAACAATAACCCAGAGCATTTTCTGACTACCAACCCATACTATGATTCTCGAGTTGTGGGCAAA TATTGTGAGAAACGTGATCCGACCTTGGCAGTTGTAGCTTATAGGCGAGGGCAATGTGATGATGAACTTATCAATGTCACAAACAAAAATTCTTTGTTCA AACTACAAGCAAGATATGTTGTCGAGAGGATGGATGGTGACCTTTGGGAGAAAGTTCTTATCCCCGATAATGTCTACAGAAGGCAACTTATTGATCAGGT TGTATCTACTGCTCTTCCGGAAAGCAAGAGCCCTGAACAAGTTTCTGCAGCTGTTAAGGCTTTCATGACTGCTGATCTACCTCATGAATTGATTGAGCTT CTTGAGAAGATTGTGCTTCAGAATTCTGCATTCAGTGGGAACTTTAATTTGCAGAATCTGCTTATTTTGACAGCGATAAAGGCTGACCCATCCAGAGTTA TGGATTATATTAATAGACTGGATAATTTTGATGGACCTGCAGTTGGAGACATGGCTGTTGAAGCTCAGTTATATGAGGAAGCATTTGCAATATTCAAGAA GTTCAACTTAAATGTTCAAGCAGTCAATGTCTTGCTAGATAATATTCACAGCATTGATAGAGCTGTGGAGTTTGCTTTCCGAGTTGAAGAAGATGCTGTT TGGAGTCAGGTGGCCAAGGCTCAACTCAGGGACGGGCTAGTAAGTGATGCT BLAST |
Tissue | pods |
Gene name | LI_gene_193071; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350664
Blastp | Clathrin heavy chain 1 from Arabidopsis with 93.68% of identity |
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Blastx | Clathrin heavy chain 1 from Arabidopsis with 95.11% of identity |
Eggnog | clathrin heavy chain(ENOG410XPH1) |
Kegg | Link to kegg annotations (AT3G11130) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416840.1) |
Pfam | Region in Clathrin and VPS (PF00637.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |