| Id Trinity | TRINITY_DN52479_c1_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_350667 |
| Sequence | TGCACGACCTCTGATTAATGTTTGTGACCGTTTTGGATTTGTTCCAGATCTAACTCACTATCTATACGCAAGCAACATGCTTCGCTATATTGAAGGTTAT GTTCAGAAGGTGAACCCCGGGAATACTCCTTTAGTTGTTGGGCAGCTGCTAGATGATGAGTGTCCTGAAGATTTTATCAAAGGCTTGATTCTTTCTGTTC GTTCATTACTGCCAGTGGAGCCCCTTGTGGAGGAATGTGAGAAGAGGTGGTATCTGTTCTCTAATACTACATATTGTTATTTTGCGTTCTTATTTCTGAC TTTCTTTTGGATCTATTTTTGGTGTTCAGGAACCGCCTTCGCTTGCTCACACAGTTCTTGGAACATCTTGTATCTGAGGGAAGCCAGGATGTACATGTTC ACAATGCACTGGGTAAAATCATCATTGATAGCAACAATAACCCAGAGCATTTTCTGACTACCAACCCATACTATGATTCTCGAGTTGTGGGCAAATATTG TGAGAAACGTGATCCGACCTTGGCAGTTGTAGCTTATAGGCGAGGGCAATGTGATGATGAACTTATCAATGTCACAAACAAAAATTCTTTGTTCAAACTA CAAGCAAGATATGTTGTCGAGAGGATGGATGGTGACCTTTGGGAGAAAGTTCTTATCCCCGATAATGTCTACAGAAGGCAACTTATTGATCAGGTTGTAT CTACTGCTCTTCCGGAAAGCAAGAGCCCTGAACAAGTTTCTGCAGCTGTTAAGGCTTTCATGACTGCTGATCTACCTCATGAATTGATTGAGCTTCTTGA GAAGATTGTGCTTCAGAATTCTGCATTCAGTGGGAACTTTAATTTGCAGAATCTGCTTATTTTGACAGCGATAAAGGCTGACCCATCCAGAGTTATGGAT TATATTAATAGACTGGATAATTTTGATGGACCTGCTGTTGGAGAAATGGCTGTAGAAGCTCAGTTATATGAGGAAGCATTTGCAATTTTCAAGAAGTTCA ACTTGAACGTTCAAGCAGTTGATGTATTGTTAGACAATGTTCATAGCATTGATAGAGCTGTGGAGTTTGCTTTCAGAGTTGAAGAAGATGCTGTTTGGAG TCAGGTGGCCAAGGCGCAACTCAGGGAAGGGCTATTAAGTGATGCAATTGAGTCATTTATACGAGCAGATGATGCCACACAATATTTGGATGTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_193071; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350667
| Blastp | Clathrin heavy chain 1 from Arabidopsis with 93.16% of identity |
|---|---|
| Blastx | Clathrin heavy chain 1 from Arabidopsis with 94.68% of identity |
| Eggnog | clathrin heavy chain(ENOG410XPH1) |
| Kegg | Link to kegg annotations (AT3G11130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_004500501.1) |
| Pfam | Region in Clathrin and VPS (PF00637.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |