Ll_transcript_349550

• Id Trinity: TRINITY_DN52480_c1_g1_i14
• Name Transcript: Ll_transcript_349550
• Sequence: TATGTTAATGGGAGGGAGCAAGCAAGAATGAATGACTGGGAGAATGAACAGAGATCAAATTACAGAAAGAGTGACGAGATCGATTTGAGGATAAGTGTTC ATGGCGAAGAAGCTTCTTCTTGGACTTTTGAAAAAGAAGTATCTGGTTCTTCTGACATTAAGGCCAAATCTCTGGGAAGTTCAGGAAACATGAAGAAATG TGTTGATATTTCAGCAAGGAAATTGGATGATGCTGCCTCGGATATGCTCGAAGTTCCCCCTAAATCATCCGCTCAAAAAGATGCCAGTTTGATTCATAAG AATGAGGGTTTAAATGCAAAAGCTAGGGATAATTCATCTGCTAGAAATAAATTTCATGCTGGCAGCACTTTTGTAAACCAAGTGGAAAGTGAAGCTGGTA CTGCCATTTTTACTGCGACAACCCATGCCACTGAAGTCACAAGTCCAACGCATCGTAAAGTGGGTGCTTCTGGTGGACAAAAGAATCTCGAATCCTTATC TATTGGTGGAAAAGCCACATCCAGGCATACTGCTCATGGCATGCAAGGTAAAAGTGATCATCGTAACAAGGGAGTATTAACTAATCAAGATGCCGATGGT TGGCGAAAGAAATCTGTGGTAACTGATTGTTTAGCTTCATCAGCTCCACTGTCGGAGCCATCTGATGTTCTTGTTGGTGACCATAGAATATCTTTAGAGA CATATGATAAGTCTGGGTCTTATAACAAAGGAAGGCACGATGGAGATTCTGTTCAAGCTAGGTCGGATTCAGTTGATGACCATGCACAGCGTGTCAAAAT GAAAGAGTTAGCCAAGCAACGGACTAAGCAATTGCAGGAGGAAGAGGAGGAGCGCATAAGAAGGCAAAAGGCTAAAGCTCTTGCGAAATTGGATGAATTA AACAGGCGTTCTCAAACAGTGGCGGGGTCAACTCAGAAAGAGAATGCTACAAGTTCTGCAGTCCAGAATAAGCAAGATGATTTACAACCTTCTGAATCAG AAGTTGTAGCAGACATATGTGGAGTTGTCAAATCGGCTGTAAATTCTAATACCAACACTGTTTGTCAGTTTAATGATACCAGCTTTAATAAAGTGGAAAA ACCCATCCTGTCCAGTGAGCCACCTGTAGTGACTCATAAGAATTCTGTTAAAGGAACTGTTCTGATTCAGAACTTGCCCCAGGATGGTGATAGTGCTGGT GCCGTTAATGATTTACAGGTTTACAACACTACTGCCTCTAAGCAGAAAAGAATAAGCTATAAGCAAAAGCAGAGCATTTCTTCGGAGAAAAAGTTGAGTG AAAAGGTTGTTTTCACCAATTCGACTACCTTGAAATTTGAGAATGACAAAGTTGTTGATGTTACTGTGCCTTCTTGCAATGTTACAAATGAAGTTGGTTT AGCATGTGTTCCTGGATTACCCGTGAATTCAAGTGCTATGGTTGAGTCTTCTGTAAATCAGAAAAAGTACAGGAATGTCAAAAACAAACACAAAGTTGAA GAGAGTTCATCTCTGACTGCACCACCATTGGCACCAAAAGAATCCAATCTTTCAGAAAGTTCTGTTGAAAGTGATAAGCCCAAGGCTTCTGACTTTGAGT TAGATCAGTGCTCACTTCACCCTGCGTCCTTGTCTAAAGACTCTAATCAGTTTTCAGAGCAGCACAGGCATTTAGCAAATGAGGAGTCCCATGCTAGGAT GACTAGCCAGGGTAAATCACAAGATTCTCGTAGGAAGCCAAGAAATTTGCAGACTAATAGACCAGCAGAGAAATCCCATGGAAGTGATGTTGTGATGTGG GCGCCTGTGAAACCACAGAACAATACCGAGGTCATGGACGAATCAAGTGAAAAAAGTAATTCTGAGGCAGCTAATCCTGTAAAGAGAGATCAGCAGGTTC ATAATTTAAAAAATAAGAGGGCTGAAATGGAGAGATATATTCCAAAACCTGTTGCGAAAGAAATGGCTCAGCAAGGAAGCACACATCAGGTGGTTTCATC AATCAGTCAGGCTACCGCAGGTCAGGATGTTGAAAGAGCTGCTTCTGGTTCTCAGAGCCCTCAGCATACGAATTCAGCTTTTGGAAAAGTGGGTTTTCTA GTAGAGTCTAAAAATAGAGATGGTAGGCATAATAAGCAGGGAAAAGCACATGGATCATGGCAGCAACG
• Tissue: pods
• Gene name: LI_gene_193078;
• Additional information: details;

Expression of Ll_transcript_349550

FPKM

• PAB: 5.9
• PNAB: 13.5
• PS1: 14.6
• PS2: 7.5
• PS3: 9.2
• PW1: 9
• PW2: 10
• PW3: 7.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349550

• Blastp: Protein MODIFIER OF SNC1 1 from Arabidopsis with 33.78% of identity
• Blastx: Protein MODIFIER OF SNC1 1 from Arabidopsis with 33.33% of identity
• Eggnog: protein MODIFIER OF SNC1(ENOG41124H0)
• Kegg: Link to kegg annotations (AT4G24680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463578.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;