Ll_transcript_349540

• Id Trinity: TRINITY_DN52480_c1_g1_i5
• Name Transcript: Ll_transcript_349540
• Sequence: ATGAGGGATATTACGGTCCTCCAATGGGCTACTGCAATCCAAATGAACGAGATGTTCCTTTCATGGGCATGGCAGCTGGACCCCCTGTTTATAATAGGTA CCCGAATCAAAATCTTCCTGAACCTGGCAATTCCCAAGGTAGATCTGATGGTTATGGTACTGCTGGGAAGCCATTGGCCTCAGAGCATGTAGATTTCAGC CATCCCCCTGATACTGTTGGACCATACAGAGTTCTTCTTAAGCAGCATGAGTCAGATGGAAAAAATGAACCGGAAAGTTGGGAGGATTCAGCAACAATCG GTGCGTCTTATGTTAGTGAAAGGGACAGATCAAGAATGACTCACTGGGAGAATGAACAGAGATCAAATTACAGAAAGAATGAGGAGAAAGATGGGTGGAG AAGTGCTCATGGTGAAGAAGCTTCTTCTCAGACTTCTGAAAATCCAGTATCTGGTTCTTCTGTCATTAAGGCCAAATTTCCTGAAAGTTCAGGAAACATG AAGAAATCCAGTGATAATTCAGCAAGGAAATTGGATGGTGCTGCTTCTGATATGGTAGAAATCCCCCCGAAATCAGCTGCTCCAAAAGATGCCAGTTTGA TTCAGAAGATAGAGGGTTTGAATGCAAAAGCAAGAGATAATTCATCTGCTTCTGGGGGTGAAAAGAATCTCCAGTCTTTATCTGGTGATGGAACAACTAC ATCCAGGGTAACTGGTCATGGCATGCAAGGTAGAAGTGATCATCGTAACAAGGGGAAATTAACTAATCAAGATGCTGATAGTTGGCGAAAGAAATCTGTG ATTGCTGATTCTTTAGCTACATCAGGCCCACTGTTGGAGGCATCTGATCTTCTTGTTGGTGACCATAGAATATCTATTGAGACCTATGATAGGTCTGCGT CTTATAACAAAGCAAGGCGCGAAGAGCCTGTTCAAGCTAGGTCAGATTCAGTTGATGACCATGAACAGCGTGCCAAAATGAAAGAGTTAGCCAAACAGCG GACTAAGCAATTGCAGGAGCAAGAGGAGGAGCGCATAAGAAAGCAAAAGGCTAAAGCTCTTGCGAAATTGGATGAGTTAAACAGACGTTCTCATACTGTG GTGGTGTCAACTCAAAAAGAGAATGCTGCAAGTCCGGCTGTCCAGATTAAGCAAGAGGACTTGCAACCTTCTGAAGCAGCAATTATTGCAGGCAAATCTG GAGTTGTCAAATCAGCTGTAAAGACTAATATCAATGCTGTCTGTCAGATTAATGATACCAGCTTCAATAAAGTGGAAAACCCCATGCTTTCCACTGAGCC ACCTTTAGAGACTCACAAGAATTCTGTCGAAGAACCTGTTCTAATTCAGAACTTACCCCAGGATGCTAATAGTGCTGATGCCATGAATGCTTTACAGCTT CACAACACTATTGCGTCTAAGCAGAAGCGAATGAGCTATAAAGAAAAGCAGAGAATGAGTGAAAAGGTTGTTTCCACCACCTCAGCTGCCCAGAAATTTG AGACTGGCAAAGTTGTTGATTTTACTATGCCTTCTGCCAATGTTACAAATGAAGTAAGTTCAACCTGTGGTCTTGACTTATCCGGGAATTCAAGTGCTGT AGTTGAGCCTTCTGTAAATCAGAAAAAGAATAGGAATGACAAAAACAAACACAAAGTTGAGGAGAGTTCATCTCTGTCTGAACCACCACTGGCACCAAAA GAACCCAATATTTTGAAAAGTTCTGTTGAAAGTGATAAGCCCACGGCTTCTGACTTTGAGTTAGATCAGGGCTCATTTAACCCTGCATCCTTGTCTAAAG ATTCTAACCAGTTTTCCGAGGAATACAGACATTTAGCAAAAGAGGAGTCTCATGGTAAGATGAATAGCCAGTGGAAATCACAGCATTCTCGTAGGACACC AAGAAATTTGCAGACTAATAGGCTAGCAGAAAAATCCCATGGGGGTGATGCTGTAATGTGGGCACCTGTGAAACCTCAGAACAAGATCGAGGTCATGGAT GAACCAAGTGACAAAAGTAATACCGAGGCATTTAATACTGTAAAGAGTGATCCGCAGGTTCATAATTTAAAAAATAAGAGAGCAGAAATGGAGAGATATA TTCCAAAACCTGTTGCGAAAGAAATGGTTCAGCAAGGAAGCACACAACAAGTGGTTTCATCAATCAGTCAGGCTGATGCAGATGAGGGTGTTGGAAGAGA TGCCTCTGGTTCTCAGAGTCCTCAGACTGTTCAGCATACTAATTCAGCTTTTGGAAAAGTGGGTTCTAGAGTGGAGTCTAAAAATAGAGATGGTAGGCAT ACTAAACAGGGAAAAACACGTGGATCATGGATGCAACGAAATCTGACAGAACCAACTAACGTGCATGATATGCAAGATGCACTGGACCTTGACTCAAACT CTATTCCAAATGTTCAAAGACCAACAGAGCATCATTTAGATCAGAAGTCTGAAACTAGCCTGGTGAAAGGGCAGAGAAAACATTTCAATGACTCTAGGGA TCATGATGGTTTTAGCAATCCCATCAATCATGATTCAGCTGCCCCAGTTTCTGTTCCTGTTATTAAAGATCATACTGTAACAGGGAGAGGAAAGCGGGGT CCTTTCAGAGGACATAAGGGTCCAGGGGTGAACCATGATGCTGATCACAATAGAAGTACCGGGGAGACAGAGAAGATTGAAAAACATGTATCATCCTCTG AGCAAAGTCAAACAGATGTTGTTGCTGCTAAAGAAAATCGAGTTGTTGGGGAACGTTTGACGTCTCACTGGCAACCTAAATCTCAGGCCTCTAATAATCA GAGAGGAGACAGACCCATTGATCAAAATGTTGGCTCACTGGTTATCAGAGTTAAAAAGGATCATGCTCTTGATAGTGAGTCAATTTGGGCAGGTCGTGAC AAGGAGTCTAAGGCTTATGCAGCCCGACCTCACCATGATAAATCGGTCTATGGAAAGAGCAAGGAAGGAGAAGCTCCACATTTTGGGAATCAGGACTCTG GAAGAGAGAGAAAAAATGCTCCAGCAAAGAGGCCTTCCCTCTCCCCAAATAAGGTTAGCTCAGTTGAGCAGGCTCCAACAAGTGTGGATCTTAGGCATGG GCAACACCCTTCATCTGGGTTTGGTAAAAACGGAAACCAAAGTCGGTTTGGAAGAGGACATGAATCTCGTGGAGATTGGAAATCACCTGCCCAGGATAAC AGGCATTATAACCACCAACCTAAAAACCGGGAAAGGCCGGGCTCAAGCATGCATCATGAGTATCAACTTGTTGGACCATATGATGACAGCAAACCGGATC ACTTTGGACGACCTAGAGATAGTTCCTATGGTGGACCTAGAGAAAGTAACCATGGTGGAGAGAGATTCAGGGAGAGAGGCTATACTCATTCACGACGAGG TGCAGGAAACTTTCAAGGAAGGCAGGGTGGTGTTGATTAAGACATGTTGTGTTAATCAGCATGGGATACTTTATTTAGGTGGTCTTTGTGTGTTCCACAG AAGCCATACCTTTTTAATTTACTAGTTTGTTCAGTCGTGTTTTCAGGTACATGTAGTCTAGGTTTCAGATACACGTTTGAATTTTGAATTGTAATGTAGT CACATTATTATTTTCTGATTGTGTATGTGTATTCAACAGGGGCAGAAGTGATGAAGATGGTGCCATGTTTCTTTTGGGATAAAGGACGACTATTTGTGCT GTTGGTTATTATTTTCTAATGTATCATTGAAATTAGTAATTTGGTGCCGTTTTGTTTTTTAATGGGACACTTGACATGTTTCAAATAGCCTGTTCCTGGG ATAACAGAGACGCCGATAGGAGAATTAGTGTTCCACGTTGCTCGTCCTTTTTTGTCAGGAAATTTTGAAATGTGCTCAAACGGTTGCTCAGTTTGGTTAT GAAAATGATTATTTAGAATTTAGTTGATTCTTGACCAGTATAGTTTTAGCCTTTTGTAGTGCAGGTTTGATAGCGTGTTTGAAATATAGTTTAACACCCC TACTTTGGTGTGTATTGTACATTCGAGTAATCACATGATTTACCAATTAGAATGGCAAGATCATAGCTCAATTGACTCCATATCTTTTTTTTACAGTAAG TGAACCATTCC
• Tissue: pods
• Gene name: LI_gene_193078;
• Additional information: details;

Expression of Ll_transcript_349540

FPKM

• PAB: 0.6
• PNAB: 1.3
• PS1: 2
• PS2: 0.9
• PS3: 1.1
• PW1: 0.9
• PW2: 0.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349540

• Blastp: Protein MODIFIER OF SNC1 1 from Arabidopsis with 29.42% of identity
• Blastx: Protein MODIFIER OF SNC1 1 from Arabidopsis with 29.7% of identity
• Eggnog: protein MODIFIER OF SNC1(ENOG41124H0)
• Kegg: Link to kegg annotations (AT4G24680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463980.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;