Ll_transcript_349541

• Id Trinity: TRINITY_DN52480_c1_g1_i6
• Name Transcript: Ll_transcript_349541
• Sequence: TTCAAATTACAGAAAGAATGGGGAGATTGATTTGAGGAGAAGTGCTCATGGTGAAGAAGCTTCTTTGGAAAATCAAGTATCTAGTTCTTCTGTTATTAAG GCCAAATCTCCTGAAAGTTCTGGAAACATGAAGAAATCTGGTGATATTTTAGCAAGGAAATTGGATAGTGCTGCCTCTGATATCCCAGAAATCCCACCTA AAACATCTGCTTCGAAAGATGCCAATTTGATTCAGAAGATAGAGGGTTTAAATGCAAAGGCGAGGGATAATTCATCTGCTAGAAATAAATTTCTTGCTGG TGGTGCTGTTCTAAACCATGTGGAAAGTGAATTTGGTGCTGCTGTTGTGCTTCCTGTGAAAACCCATGCCAACGAAGTCATAAGTCCAACACATCATGAA GTGAGTGCTTCTAGTGGAGAAAAGAATCCTGAATCCTTGTCTGTTGTTGGAACAGCCACATCCAGGCAAACTGCTCATGGCATGCAAGGTAGAAGTGATC ATCATAACAAAGGAAAATCAACTAATCAAGATGCTGATGGTTGGCGAAAGAAATCTGTGGTTGCTGATTCTTTACCTTCATCAGGTCCACTGTTGGAGCC ATCAGATGTTCTTGTTGGTGATCACAGAATATCTCTAGAGATCTATGATAAGTCCGGGTCTTACAACAAAGCACGGCGTGATGGAGAATCTGCTCAAGCC AGGTCGGATTCTGTTGACAACCATGCACAGCGTGCCAAAATGAAAGAGTTAGCCAAACAGCGGACTAAGCAATTGCAGGAGCAAGAGGAGGAGCGCATAA GAAAGCAAAAGGCTAAAGCTCTTGCGAAATTGGATGAGTTAAACAGACGTTCTCATACTGTGGTGGTGTCAACTCAAAAAGAGAATGCTGCAAGTCCGGC TGTCCAGATTAAGCAAGAGGACTTGCAACCTTCTGAAGCAGCAATTATTGCAGGCAAATCTGGAGTTGTCAAATCAGCTGTAAAGACTAATATCAATGCT GTCTGTCAGATTAATGATACCAGCTTCAATAAAGTGGAAAACCCCATGCTTTCCACTGAGCCACCTTTAGAGACTCACAAGAATTCTGTCGAAGAACCTG TTCTAATTCAGAACTTACCCCAGGATGCTAATAGTGCTGATGCCATGAATGCTTTACAGCTTCACAACACTATTGCGTCTAAGCAGAAGCGAATGAGCTA TAAAGAAAAGCAGAGAATGAGTGAAAAGGTTGTTTCCACCACCTCAGCTGCCCAGAAATTTGAGACTGGCAAAGTTGTTGATTTTACTATGCCTTCTGCC AATGTTACAAATGAAGTAAGTTCAACCTGTGGTCTTGACTTATCCGGGAATTCAAGTGCTGTAGTTGAGCCTTCTGTAAATCAGAAAAAGAATAGGAATG ACAAAAACAAACACAAAGTTGAGGAGAGTTCATCTCTGTCTGAACCACCACTGGCACCAAAAGAACCCAATATTTTGAAAAGTTCTGTTGAAAGTGATAA GCCCACGGCTTCTGACTTTGAGTTAGATCAGGGCTCATTTAACCCTGCATCCTTGTCTAAAGATTCTAACCAGTTTTCCGAGGAATACAGACATTTAGCA AAAGAGGAGTCTCATGGTAAGATGAATAGCCAGTGGAAATCACAGCATTCTCGTAGGACACCAAGAAATTTGCAGACTAATAGGCTAGCAGAAAAATCCC ATGGGGGTGATGCTGTAATGTGGGCACCTGTGAAACCTCAGAACAAGATCGAGGTCATGGATGAACCAAGTGACAAAAGTAATACCGAGGCATTTAATAC TGTAAAGAGTGATCCGCAGGTTCATAATTTAAAAAATAAGAGAGCAGAAATGGAGAGATATATTCCAAAACCTGTTGCGAAAGAAATGGTTCAGCAAGGA AGCACACAACAAGTGGTTTCATCAATCAGTCAGGCTGATGCAGATGAGGGTGTTGGAAGAGATGCCTCTGGTTCTCAGAGTCCTCAGACTGTTCAGCATA CTAATTCAGCTTTTGGAAAAGTGGGTTCTAGAGTGGAGTCTAAAAATAGAGATGGTAGGCATACTAAACAGGGAAAAACACGTGGATCATGGATGCAACG AAATCTGACAGAACCAACTAACGTGCATGATATGCAAGATGCACTGGACCTTGACTCAAACTCTATTCCAAATGTTCAAAGACCAACAGAGCATCATTTA GATCAGAAGTCTGAAACTAGCCTGGTGAAAGGGCAGAGAAAACATTTCAATGACTCTAGGGATCATGATGGTTTTAGCAATCCCATCAATCATGATTCAG CTGCCCCAGTTTCTGTTCCTGTTATTAAAGATCATACTGTAACAGGGAGAGGAAAGCGGGGTCCTTTCAGAGGACATAAGGGTTCTGGGGTGAACCATGA TGCTGACCACAAGAGAAGTGCTGGAGAGACAGTGAAGATTGAAACACATGAATCATCTGCTGAGCACAGTCAACCAGATATTGGTGCTGTTTTCAAAGAA AATCGGAGTGTCGGGGAAAGTTTTACATCTTACTGGCAACCTAAATCTCAGCCATCTAATAATCAGAGAGGAAACAGACCCAGTGATCAAAATGTTGGTT CAGTGGTTGTTAGAAAGGATCCTGCTTATGATAGTGAATCAATCCGGGCAGGCCGTGATAAGGAGTCTAACGCTCATGCAGCCCAACCTCACCATGACCA ATCAGTCTCTGAAAAGAGCAAGGATGGAGAAGCTCCACATGTTGGGAATCAGGAGTCTAGAAGAGAGAGGAAAAATGCTCCAGAAAAGAGGCGCCTCGAC TCCCCAAGTCAGGTCAGCTCAGGTGAGCAGGCTTCTACAGGTAGGGATCTTAGGCATGAGCAACGCCCATCGTCTGGCTTTGGTAAATCACCTGCCCAAG ATAACAGAAATTATAACCACCAACCTAAAAACCGGGAAAGGCAGGGCTCAAACATGCATTACGAGTACCAACATGTTGGGCCATATGATGACAGCAAAAT GGACCACTTTGAACAACCTAGAGATGGTAACTATGGTGGACCTAGAGATGGTAACTATGGTGGACCTAGAGATGGAAACCGTGGTGGAGGACGATTCAGG GAGAAAGGCCATGCTCATTTACGACGGGGTGCAGGAAACTTCCAGGGACGGCAGGGTGGCCTTGATTAGATGCTGTTAATCAGCAGTGAAGACTTTCTTT AGGTGGTCTTAGTGTGTTCCATCAGAAGCCATACCTATTAATTTGCTACTTTATTCAGCCATGTTTTCAGGTACATGTATTTTAGGTTTCAGAAAAGTTT GAACTTTGAATTGTAAACGTAGTCACATCAATTATTTTCTGATGGTGCGTGTGTTCAGCAGGGGTAGAAGCAATGAAGGTGGTGACCATGTTTTTTTGGG GTAAAAGGTTTGATGATTATTTGTGCCGTAGTTGATTGTTATTTTCTAATGTATCATTCAAATAGTAATTTGGTGCCCTTTTGTTTTTCAATGGCACACT TGACATGTTTCAACGAGCTTGATCCTGAGATAACAATGATACCTAAGAGAGATTTTGTGTTCCACGTTGCTCACCATTTTTAAAGGAAAAGTAACTGGCC TAAGAAAATATGATTATTTAGAATTTAATTAATAACTTGAGGGTGGG
• Tissue: pods
• Gene name: LI_gene_193078;
• Additional information: details;

Expression of Ll_transcript_349541

FPKM

• PAB: 1.7
• PNAB: 3.4
• PS1: 3
• PS2: 2.7
• PS3: 2.9
• PW1: 1.5
• PW2: 2.5
• PW3: 2.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349541

• Blastp: Protein MODIFIER OF SNC1 1 from Arabidopsis with 31.09% of identity
• Blastx: Protein MODIFIER OF SNC1 1 from Arabidopsis with 30.88% of identity
• Eggnog: protein MODIFIER OF SNC1(ENOG41124H0)
• Kegg: Link to kegg annotations (AT4G24680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463980.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;