Ll_transcript_348903

• Id Trinity: TRINITY_DN52483_c1_g1_i14
• Name Transcript: Ll_transcript_348903
• Sequence: GGAAATTTGGCACAACATTTCAGCCACCCATGATAAAATCGTGGCCAACTTAAATTGAAATCCAAAATTAGTTTGTATTTAGGTACGTCCATATAGTGAG AAAAGGCTCCAGCTTACCTCACCTGACTTCTTCCATCACTGCTTTGTGCTTCTTCTTCAGCCCTCTTCTCCATTGTCTAAGCCATGAGACTGTTGATCGT AGATTCCATATTCAAATATGCACCCTCCTTCTTCTTTATCGTCTCAACTATCTCCTTGTTGCGGTTTTATAAGCTTTTATTTCCTCAATCGTGATCTCCT CGCAAATTCGCAATTCGATTTTGATCCTCGACTCAAGCAATGCGTTGAATTGAAGTCATAGGTTAGGGCTTCTTACTGTTCTACTTTTTTTTCTTAACTT ACAAATTTTGAATGGGTGATTCTTTGAAATAGAGAAAAGATCATGAAAAATTAGGGTTTGAGATATTGATTTGTAAGAAAAAATAAATTAGTGGAGTTAT CATAGGATTGAGATGAAGTAGAACTAGTAGAGGAAGACGACAATGAAAGAGTGAAGGAGACAAGTTCAATGCGAAGACACACGGAACAATATTCGTAAGC TCCAAGAATCACTAAAAAAGTAATATGAACAATAAAATCGATGTGATTGTTTTCTCATGCTAATGAATGATGATCAACATTGAAAATATTGGATTAATGT TACTAGTTCATGATTTAAGATCTTAAAAACTTCTTTAGTGCCTAATTTCTTAATGCAGAGATTTGCTTTCTCATGAGGAGTATGATAATATTATTGGCTA ATTGATCAAACATTACTCTTTCATTATTTCACTACTTTTAGGGACTCTACTGTCCACCCTAGTATGGGAAATTGGTTGCGCTTGTCTACAAAGTTGGTTG GGATTAGCACACCACTTGAACGTTAGAGAACACATAGGTCCTTCTTAAAAACAACCGTTCTTCAAACATTGTAATATTATATTCAATTAAACACCAAGTG AGATTGTATTTTCAATGTATTTATATGGATGAGTAATCAAATAAAGAGTAAAACTTAGTGTTAGATGGTTTAGGAAGGTAGAGAGTTGCAATAGCAATAA AATCAATGAGTGGTTCACAAGCTTCATCCTTCTCCACTCTTGGATTATGGAAAACCATATCTATCTTACTATAATCTGTTTGGAAAGACCATGCATATGC ATTTCAAGCATTAGTACTATACAAGTTTTGCATAAGTAAGAAAAAGATTGAAGAACAAAGAATTAGGGGAGCCTTTTATATGTATTGAATATTTAAAGTC AAATTATTGAATTCATTGGTGTGTTGCTTTCAATAGTTTAAAGCAGGGGTAAATTAATACTTCATGTCTCAAATCACTTCCATCATCATCACACCATTAT CAGCTTATTGCTAATAGACAATTCATAGAAGAAGTGGTAAACTTCAAAATACTTAGCATTATATGTTATTGCAGTAAGAATATGAGAGTAAAGGAAGTGG TAGGCCAGAGATGTTTATGTTGATCTCCCCTGCTTTCAATGTATCATCCAAGTCTTAGGTGGTACTTTACTACCATGAATCATTTACCGTAGGCTTTTAT CTCTACAAAACTCTTGCTCTTGCTTCCATTTCTCCTTCAAATTAGGTCATCATGGGCTTGGTATGTGATTATTGAATCTCCAAATTAAAGTAAATAGACA AAAAATATTTAGCCTTCAACACTAAATATTTTTAAAATAATAGACTCATCTTAGATGCTTCTTCATTTCATTCGTATGAAGCAGCTGTGTCTAAGGGATC TTTTGATGATAGTTTCACGATAATATGGTCTGATGATCATTTTACTACCTCCAAAGATGGCCAGATCTGGTATCTCTCCCTTGACAATGACACAGGATGT GGTTTTGAAACAAAGCAAAGATATAGATTTGGTTGGTTTAGTATGAAGCTGAAGTTGGTATGAGGTGAGTCTGCTGGTGTTAGCACAACATATTATTGAG AATGGTAAAGGACTAGAAAGAGATGAGCTTGACTTTGAGTTCTTGGGAAATAGAACACGAGAGCCTTATCTTATTAAGATAAATATTTAGAAGAATGGAA CTGAAAACCATGAAATGAGACGCCAACTATGGTTTGACCCCACAGAAGATCACATCTATTCCATCCTCTGGAAAACCCACCAAATTATGACAAAGCTGGC TCATGGTCTTCTGTCCGGTAAATATTCTACTCCAGCTTCTCAGAATGATGAAAATGCAAGTGTTGCCTCTTCAACTTTGACTGATAAACAAGAAGGGATA CCTCCACGTATGTTTAAAGCTGTAATTGCTGCTAGCCATCCTGAATTTTCATCTATGCGGCAACAGGATGCTTTAGAATTTTTCCTTCATTTTATTGACC AAGTTGAGCGAGCTAATAGTGGGAAAACTGAACTGGATCCTTCGAGGAGTTTCAAGTTTGGTATTGAAGATCGAATCTTGTGTTCCTCTGGAAAAGTTGC ATATAATAG
• Tissue: pods
• Gene name: LI_gene_193102;
• Additional information: details;

Expression of Ll_transcript_348903

FPKM

• PAB: 0.3
• PNAB: 0.8
• PS1: 1
• PS2: 1.1
• PS3: 1.3
• PW1: 1.3
• PW2: 0.7
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_348903

• Blastp: Ubiquitin carboxyl-terminal hydrolase 14 from Arabidopsis with 68.22% of identity
• Blastx: Probable xyloglucan endotransglucosylase/hydrolase protein 8 from Arabidopsis with 65.48% of identity
• Eggnog: ubiquitin carboxyl-terminal hydrolase(COG5207)
• Kegg: Link to kegg annotations (AT3G20630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423202.1)
• Pfam: Ubiquitin carboxyl-terminal hydrolase (PF00443.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;