Id Trinity | TRINITY_DN52483_c1_g1_i22 |
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Name Transcript | Ll_transcript_348912 |
Sequence | GGAAATTTGGCACAACATTTCAGCCACCCATGATAAAATCGTGGCCAACTTAAATTGAAATCCAAAATTAGTTTGTATTTAGGTACGTCCATATAGTGAG AAAAGGCTCCAGCTTACCTCACCTGACTTCTTCCATCACTGCTTTGTGCTTCTTCTTCAGCCCTCTTCTCCATTGTCTAAGCCATGAGACTGTTGATCGT AGATTCCATATTCAAATATGCACCCTCCTTCTTCTTTATCGTCTCAACTATCTCCTTGTTGCGGTTTTATAAGCTTTTATTTCCTCAATCGTGATCTCCT CGCAAATTCGCAATTCGATTTTGATCCTCGACTCAAGCAATGCGTTGAATTGAAGTCATAGGTTAGGGCTTCTTACTGTTCTACTTTTTTTTCTTAACTT ACAAATTTTGAATGGGTGATTCTTTGAAATAGAGAAAAGATCATGAAAAATTAGGGTTTGAGATATTGATTTGTAAGAAAAAATAAATTAGTGGAGTTAT CATAGGATTGAGATGAAGTAGAACTAGTAGAGGAAGACGACAATGAAAGAGTGAAGGAGACAAGTTCAATGCGAAGACACACGGAACAATATTCGTAAGC TCCAAGAATCACTAAAAAAGTAATATGAACAATAAAATCGATGTGATTGTTTTCTCATGCTAATGAATGATGATCAACATTGAAAATATTGGATTAATGT TACTAGTTCATGATTTAAGATCTTAAAAACTTCTTTAGTGCCTAATTTCTTAATGCAGAGATTTGCTTTCTCATGAGGAGTATGATAATATTATTGGCTA ATTGATCAAACATTACTCTTTCATTATTTCACTACTTTTAGGGACTCTACTGTCCACCCTAGTATGGGAAATTGGTTGCGCTTGTCTACAAAGTTGGTTG GGATTAGCACACCACTTGAACGTTAGAGAACACATAGGTCCTTCTTAAAAACAACCGTTCTTCAAACATTGTAATATTATATTCAATTAAACACCAAGTG AGATTGTATTTTCAATGTATTTATATGGATGAGTAATCAAATAAAGAGTAAAACTTAGTGTTAGATGGTTTAGGAAGGTAGAGAGTTGCAATAGCAATAA AATCAATGAGTGGTTCACAAGCTTCATCCTTCTCCACTCTTGGATTATGGAAAACCATATCTATCTTACTATAATCTGTTTGGAAAGACCATGCATATGC ATTTCAAGCATTAGTACTATACAAGTTTTGCATAAGTAAGAAAAAGATTGAAGAACAAAGAATTAGGGGAGCCTTTTATATGTATTGAATATTTAAAGTC AAATTATTGAATTCATTGGTGTGTTGCTTTCAATAGTTTAAAGCAGGGGTAAATTAATACTTCATGTCTCAAATCACTTCCATCATCATCACACCATTAT CAGCTTATTGCTAATAGACAATTCATAGAAGAAGTGGTAAACTTCAAAATACTTAGCATTATATGTTATTGCAGTAAGAATATGAGAGTAAAGGAAGTGG TAGGCCAGAGATGTTTATGTTGATCTCCCCTGCTTTCAATGTATCATCCAAGTCTTAGGTGGTACTTTACTACCATGAATCATTTACCGTAGGCTTTTAT CTCTACAAAACTCTTGCTCTTGCTTCCATTTCTCCTTCAAATTAGGTCATCATGGGCTTGGTATGTGATTATTGAATCTCCAAATTAAAGTAAATAGACA AAAAATATTTAGCCTTCAACACTAAATATTTTTAAAATAATAGACTCATCTTAGATGCTTCTTCATTTCATTCGTATGAAGCAGCTGTGTCTAAGGGATC TTTTGATGATAGTTTCACGATAATATGGTCTGATGATCATTTTACTACCTCCAAAGATGGCCAGATCTGGTATCTCTCCCTTGACAATGACACAGGTACC AAAATGCATTACAATATAATTAACGTTTCCTTATATAAATAATGCAACCTTTCAATTTGAGACAATTTTTGAAGCATTCACTCTTTGATAGGATGTGGTT TTGAAACAAAGCAAAGATATAGATTTGGTTGGTTTAGTATGAAGCTGAAGTTGGTATGAGGTGAGTCTGCTGGTGTTAGCACAACATATTATGTAAGTGT ACAACTTCATTCAAAGATACATATGTTATATTGGAAAAGATAACAAGCTAAGGAATAAAATGTCAAAATTTGTTGAAATGGAGTTTGTACATGTCTTTTG TGACAGATGTGCAGTGAGAATGGTAAAGGACTAGAAATAGATGAGTTTGACTTTGAGTTCTTGGGAAATAGAACACGAGAGCCTTATCTTATTAAGATAA ATATTTAGAAGAATGGAACTGAAAACCATGAAATGAGACGCCAACTATGGTTTGACCCCACAGAAGATCACATCTATTCCATCCTCTGGAAAACCCACCA AATTATGACAAAGCTGGCTCATGGTCTTCTGTCCGGTAAATATTCTACTCCAGCTTCTCAGAATGATGAAAATGCAAGTGTTGCCTCTTCAACTTTGACT GATAAACAAGAAGGGATACCTCCACGTATGTTTAAAGCTGTAATTGCTGCTAGCCATCCTGAATTTTCATCTATGCGGCAACAGGTATGTTTAGTAACTT TTTATTTTCTGAACATGAATTGATCGTGTAAGAAATAATGGATATTTTTTTGTTTTATTCCATGTGTCCTTATTCATAAATTCGCGTGGAAATGTAACTT TAAGCATAAGCATTTGGGATAATGTATCTATGTGTACTTGACCCTTAGTTTGTAGACACACATATAGAAGGATGCGGAGAAAATATCAGTTGAAGTTGGA GTTGTTGTTTTCTGTTTGCTTTATAACAATTCTATTCATAGAACTTAGGCCTTGTATTTAGTTTTGATTTCCAATAAGCCTTAAAGGAGATAACATTGAC CTTCAAATTCAATGAAAGGTGTTTACTTGTTTCCATCCAACTTTATTGTCAGGGTTGCCAATACTAGTTTTCATAAAAAAAATTAAGGGGTTAAGCAAAA GTAAAACTTAAAAGCACAATTTTAGATACTTTATGACATTTTTTTTGAAAATAATACATGTTTGAATAAATACTGATGTTCGAAATTCTATCTTTGAATT TAAGTACTAAATCAATAAAGACTCCAGAAGTGCATAACTTTCATAAAACATAAACTAAATAAAATCATATATGAATATATAGTCTAAATCAGTTAAATAA TATAAGAACTGAGGAGTGAAGTTCAAACTATAAAATTGCAATAACTGGCAAACCTCGAAATCTGGACTGATGCAAAGTTAAAAAACCCAAACTATATTTC TGTCAAGGCTTAAGCTCCACCAGTGATCGTTGGATTAGTTCAGAACGAATTTGGAATTCTTGATCTCAAACTTTGTAAAAATCAACCATATAAAGTCCAT TGTCACAACTTCTAAGTCAGGCACACTCATAGACTGCTTGGGTAAGAGAAGATTTGACATATGTTGTGGATGTTGAGGTTACTCCAAATACTGGCAAACC TGGTTGAGCATTGCCCACTCCAATTTAAGATTCATTACCTATAGAAACAAAACATAATTACTCATTGAACTTAGATAGATATGAAAAATCCTTGACCTGT AATCATTTTTATAGTAATTGTTTTGCTGTTGAAATAAAATTTTCATTTGCGGGGTAATGCCCATACTTCTAGCTTCTCCACACCCGACCAAGTGGGATCC TTGTGCACTAGGCCACCAACTTTTAGTCTAAATAAAATTTTCTCCCCTTTATCATGGAACGTCTAACAAGGTTTTTAGTTATCAAATTGTAAAATCATAT TTTACTTTTTCGGTTTTCAAATGCGATTCTGACAACCATGTTTAACCTGTTATTGTTTATTTGCTCTATTTAGAAAGATGTTACTTGGCTATCTTATAAC CGTTTGATTCCAATTTCATGTTAGGATGCTTTAGAATTTTTCCTTCATTTTATTGACCAAGTTGAGCGAGCTAATAGTGGGAAAACTGAACTGGATCCTT CGAGGAGTTTCAAGTTTGGTATTGAAGATCGAATCTTGTGTTCCTCTGGAAAAGTTGCATATAATAGAAGGAACGATTACATCCTTTCCCTTAATATCCC ATTGCATGAAGCAACTAACAAAGAGGAACTAGAATCTTTTCACAAACTGAAAGCTGAGAAACTTTCTGAAGGAAAGGAAGTGTCCGGCGATGAGATTGTA CGTCCAAGGGTGCCTTTAGAAGCTTGCCTTGCAAACTTTTCAGCTCCTGAGGAGATACATGATTTTTACAGCACTGCCTTGAAAACAAAGACAACAGCTG TAAAGGCAGCTGGTCTGACATCGTTCCCTGATTACCTGGTGTTACACATGAGGAAATTTGTTATGGAAGCGGGATGGGTACCCAAAAAGCTTGATGTGTA TATAGATGTTCCTGATATTATAGATATTAGTCATATGCGTAGCAAAGGTCATCAACCTGGGGAAGAGCTGTTGCCAGATGGGGTACCTGAGGAAGATTCA GACAAACCTTGGGTCAATGAAGAAATTGTTTCGCAGCTGGTTTCCATGGGCTTTAACCATATTCATTGTGAGAAAGCTGTAATAAATACCTCAAATGCTG GTGTAGAAGAGGCCATGAATTGGTTACTATCCCACATGGATGATCCGGATATTGATGCTCCTATTTCAAAAGGGCAAGGTAGTGAGAGTGTTGACCAATC AAAAGTTGATACTCTAATTTCATTTGGATTTCAAGAAGATGTTGCTCGAAAGGCACTAAAGGCATCGAATGGTGACATTGAGAAAGCAACAGATTGGATA TTCAGCAACCCTGATGCAACAGTTTCTAGTATGGATGCTACCTCATCAAACAATGCATCTGTTCCAAATGGTGATGACTTACCTGATGGAGGAGGAAAAT ACCGACTTATTGGAATTGTTAGCCACATCGGAACCTCTACGCAGTGTGGTCACTATGTTGCTCACATCTTGAAAGATGGTAGATGGGTTATTTTTAACGA CAACAAGGTTGGGGTATCCATTAATCCTCCGAAGGACATGGGATATCTTTATTTCTTCGAGAGGCTTAGTGAATGAATTAGATACTGTGTTTAAAACTAT TGAACACCAGTGAACATTTCAAATGTAAAGAAAGGCACAGTGCATTGTAGAACGGCGCAATCGTCGACATTGTGCTGATGGTTTGTTTCCCTCCCTGTGT TGGTGCTTGGTGGATGCTTGGTAAGTCCTCATTGACTTCAGCATTATTTTGTGTAAACCTGTAACAGTGCACCATTCTTGGAACTAGTACACATAAATAG ACCCTTCTTTGATCTTTTAGAAACTGAGTTCATTGTTTCATTTTCTCCCAGAGTTGTCATTTTAAATGAAAAGTTCAAAAATGACACCTTTCAGGACTTG ATAAATGTCTCAACTCTTCACTAATGCATTACATTTCCCAAATTTGTTATCCTTGGCCCTTAGGTTGAGGATGGGCAATTAAACAAAATGGTAAGAGTTG GTATTGGGAAATGATGCATATACTTGATGTATTTGGTAGTTCTAATTGTTTTC BLAST |
Tissue | pods |
Gene name | LI_gene_193102; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_348912
Blastp | Ubiquitin carboxyl-terminal hydrolase 14 from Arabidopsis with 77.69% of identity |
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Blastx | Ubiquitin carboxyl-terminal hydrolase 14 from Arabidopsis with 75.26% of identity |
Eggnog | ubiquitin carboxyl-terminal hydrolase(COG5207) |
Kegg | Link to kegg annotations (AT3G20630) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442655.1) |
Pfam | Ubiquitin carboxyl-terminal hydrolase (PF00443.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |