Ll_transcript_348887

• Id Trinity: TRINITY_DN52483_c1_g1_i3
• Name Transcript: Ll_transcript_348887
• Sequence: GGAAATTTGGCACAACATTTCAGCCACCCATGATAAAATCGTGGCCAACTTAAATTGAAATCCAAAATTAGTTTGTATTTAGGTACGTCCATATAGTGAG AAAAGGCTCCAGCTTACCTCACCTGACTTCTTCCATCACTGCTTTGTGCTTCTTCTTCAGCCCTCTTCTCCATTGTCTAAGCCATGAGACTGTTGATCGT AGATTCCATATTCAAATATGCACCCTCCTTCTTCTTTATCGTCTCAACTATCTCCTTGTTGCGGTTTTATAAGCTTTTATTTCCTCAATCGTGATCTCCT CGCAAATTCGCAATTCGATTTTGATCCTCGACTCAAGCAATGCGTTGAATTGAAGTCATAGGTTAGGGCTTCTTACTGTTCTACTTTTTTTTCTTAACTT ACAAATTTTGAATGGGTGATTCTTTGAAATAGAGAAAAGATCATGAAAAATTAGGGTTTGAGATATTGATTTGTAAGAAAAAATAAATTAGTGGAGTTAT CATAGGATTGAGATGAAGTAGAACTAGTAGAGGAAGACGACAATGAAAGAGTGAAGGAGACAAGTTCAATGCGAAGACACACGGAACAATATTCGTAAGC TCCAAGAATCACTAAAAAAGTAATATGAACAATAAAATCGATGTGATTGTTTTCTCATGCTAATGAATGATGATCAACATTGAAAATATTGGATTAATGT TACTAGTTCATGATTTAAGATCTTAAAAACTTCTTTAGTGCCTAATTTCTTAATGCAGAGATTTGCTTTCTCATGAGGAGTATGATAATATTATTGGCTA ATTGATCAAACATTACTCTTTCATTATTTCACTACTTTTAGGGACTCTACTGTCCACCCTAGTATGGGAAATTGGTTGCGCTTGTCTACAAAGTTGGTTG GGATTAGCACACCACTTGAACGTTAGAGAACACATAGGTCCTTCTTAAAAACAACCGTTCTTCAAACATTGTAATATTATATTCAATTAAACACCAAGTG AGATTGTATTTTCAATGTATTTATATGGATGAGTAATCAAATAAAGAGTAAAACTTAGTGTTAGATGGTTTAGGAAGGTAGAGAGTTGCAATAGCAATAA AATCAATGAGTGGTTCACAAGCTTCATCCTTCTCCACTCTTGGATTATGGAAAACCATATCTATCTTACTATAATCTGTTTGGAAAGACCATGCATATGC ATTTCAAGCATTAGTACTATACAAGTTTTGCATAAGTAAGAAAAAGATTGAAGAACAAAGAATTAGGGGAGCCTTTTATATGTATTGAATATTTAAAGTC AAATTATTGAATTCATTGGTGTGTTGCTTTCAATAGTTTAAAGCAGGGGTAAATTAATACTTCATGTCTCAAATCACTTCCATCATCATCACACCATTAT CAGCTTATTGCTAATAGACAATTCATAGAAGAAGTGGTAAACTTCAAAATACTTAGCATTATATGTTATTGCAGTAAGAATATGAGAGTAAAGGAAGTGG TAGGCCAGAGATGTTTATGTTGATCTCCCCTGCTTTCAATGTATCATCCAAGTCTTAGGTGGTACTTTACTACCATGAATCATTTACCGTAGGCTTTTAT CTCTACAAAACTCTTGCTCTTGCTTCCATTTCTCCTTCAAATTAGGTCATCATGGGCTTGGTATGTGATTATTGAATCTCCAAATTAAAGTAAATAGACA AAAAATATTTAGCCTTCAACACTAAATATTTTTAAAATAATAGACTCATCTTAGATGCTTCTTCATTTCATTCGTATGAAGCAGCTGTGTCTAAGGGATC TTTTGATGATAGTTTCACGATAATATGGTCTGATGATCATTTTACTACCTCCAAAGATGGCCAGATCTGGTATCTCTCCCTTGACAATGACACAGGATGT GGTTTTGAAACAAAGCAAAGATATAGATTTGGTTGGTTTAGTATGAAGCTGAAGTTGGTATGAGGTGAGTCTGCTGGTGTTAGCACAACATATTATTGAG AATGGTAAAGGACTAGAAAGAGATGAGCTTGACTTTGAGTTCTTGGGAAATAGAACACGAGAGCCTTATCTTATTAAGATAAATATTTAGAAGAATGGAA CTGAAAACCATGAAATGAGACGCCAACTATGGTTTGACCCCACAGAAGATCACATCTATTCCATCCTCTGGAAAACCCACCAAATTATGACAAAGCTGGC TCATGGTCTTCTGTCCGGTAAATATTCTACTCCAGCTTCTCAGAATGATGAAAATGCAAGTGTTGCCTCTTCAACTTTGACTGATAAACAAGAAGGGATA CCTCCACGTATGTTTAAAGCTGTAATTGCTGCTAGCCATCCTGAATTTTCATCTATGCGGCAACAGGTATGTTTAGTAACTTTTTATTTTCTGAACATGA ATTGATCGTGTAAGAAATAATGGATATTTTTTTGTTTTATTCCATGTGTCCTTATTCATAAATTCGCGTGGAAATGTAACTTTAAGCATAAGCATTTGGG ATAATGTATCTATGTGTACTTGACCCTTAGTTTGTAGACACACATATAGAAGGATGCGGAGAAAATATCAGTTGAAGTTGGAGTTGTTGTTTTCTGTTTG CTTTATAACAATTCTATTCATAGAACTTAGGCCTTGTATTTAGTTTTGATTTCCAATAAGCCTTAAAGGAGATAACATTGACCTTCAAATTCAATGAAAG GTGTTTACTTGTTTCCATCCAACTTTATTGTCAGGGTTGCCAATACTAGTTTTCATAAAAAAAATTAAGGGGTTAAGCAAAAGTAAAACTTAAAAGCACA ATTTTAGATACTTTATGACATTTTTTTTGAAAATAATACATGTTTGAATAAATACTGATGTTCGAAATTCTATCTTTGAATTTAAGTACTAAATCAATAA AGACTCCAGAAGTGCATAACTTTCATAAAACATAAACTAAATAAAATCATATATGAATATATAGTCTAAATCAGTTAAATAATATAAGAACTGAGGAGTG AAGTTCAAACTATAAAATTGCAATAACTGGCAAACCTCGAAATCTGGACTGATGCAAAGTTAAAAAACCCAAACTATATTTCTGTCAAGGCTTAAGCTCC ACCAGTGATCGTTGGATTAGTTCAGAACGAATTTGGAATTCTTGATCTCAAACTTTGTAAAAATCAACCATATAAAGTCCATTGTCACAACTTCTAAGTC AGGCACACTCATAGACTGCTTGGGTAAGAGAAGATTTGACATATGTTGTGGATGTTGAGGTTACTCCAAATACTGGCAAACCTGGTTGAGCATTGCCCAC TCCAATTTAAGATTCATTACCTATAGAAACAAAACATAATTACTCATTGAACTTAGATAGATATGAAAAATCCTTGACCTGTAATCATTTTTATAGTAAT TGTTTTGCTGTTGAAATAAAATTTTCATTTGCGGGGTAATGCCCATACTTCTAGCTTCTCCACACCCGACCAAGTGGGATCCTTGTGCACTAGGCCACCA ACTTTTAGTCTAAATAAAATTTTCTCCCCTTTATCATGGAACGTCTAACAAGGTTTTTAGTTATCAAATTGTAAAATCATATTTTACTTTTTCGGTTTTC AAATGCGATTCTGACAACCATGTTTAACCTGTTATTGTTTATTTGCTCTATTTAGAAAGATGTTACTTGGCTATCTTATAACCGTTTGATTCCAATTTCA TGTTAGGATGCTTTAGAATTTTTCCTTCATTTTATTGACCAAGTTGAGCGAGCTAATAGTGGGAAAACTGAACTGGATCCTTCGAGGAGTTTCAAGTTTG GTATTGAAGATCGAATCTTGTGTTCCTCTGGAAAAGTTGCATATAATAGAAGGAACGATTACATCCTTTCCCTTAATATCCCATTGCATGAAGCAACTAA CAAAGAGGAACTAGAATCTTTTCACAAACTGAAAGCTGAGAAACTTTCTGAAGGAAAGGAAGTGTCCGGCGATGAGATTGTACGTCCAAGGGTGCCTTTA GAAGCTTGCCTTGCAAACTTTTCAGCTCCTGAGGAGATACATGATTTTTACAGCACTGCCTTGAAAACAAAGACAACAGCTGTAAAGGCAGCTGGTCTGA CATCGTTCCCTGATTACCTGGTGTTACACATGAGGAAATTTGTTATGGAAGCGGGATGGGTACCCAAAAAGCTTGATGTGTATATAGATGTTCCTGATAT TATAGATATTAGTCATATGCGTAGCAAAGGTCATCAACCTGGGGAAGAGCTGTTGCCAGATGGGGTACCTGAGGAAGATTCAGACAAACCTTGGGTCAAT GAAGAAATTGTTTCGCAGCTGGTTTCCATGGGCTTTAACCATATTCATTGTGAGAAAGCTGTAATAAATACCTCAAATGCTGGTGTAGAAGAGGCCATGA ATTGGTTACTATCCCACATGGATGATCCGGATATTGATGCTCCTATTTCAAAAGGGCAAGGTAGTGAGAGTGTTGACCAATCAAAAGTTGATACTCTAAT TTCATTTGGATTTCAAGAAGATGTTGCTCGAAAGGCACTAAAGGCATCGAATGGTGACATTGAGAAAGCAACAGATTGGATATTCAGCAACCCTGATGCA ACAGTTTCTAGTATGGATGCTACCTCATCAAACAATGCATCTGTTCCAAATGGTGATGACTTACCTGATGGAGGAGGAAAATACCGACTTATTGGAATTG TTAGCCACATCGGAACCTCTACGCAGTGTGGTCACTATGTTGCTCACATCTTGAAAGATGGTAGATGGGTTATTTTTAACGACAACAAGGTTGGGGTATC CATTAATCCTCCGAAGGACATGGGATATCTTTATTTCTTCGAGAGGCTTAGTGAATGAATTAGATACTGTGTTTAAAACTATTGAACACCAGTGAACATT TCAAATGTAAAGAAAGGCACAGTGCATTGTAGAACGGCGCAATCGTCGACATTGTGCTGATGGTTTGTTTCCCTCCCTGTGTTGGTGCTTGGTGGATGCT TGGTAAGTCCTCATTGACTTCAGCATTATTTTGTGTAAACCTGTAACAGTGCACCATTCTTGGAACTAGTACACATAAATAGACCCTTCTTTGATCTTTT AGAAACTGAGTTCATTGTTTCATTTTCTCCCAGAGTTGTCATTTTAAATGAAAAGTTCAAAAATGACACCTTTCAGGACTTGATAAATGTCTCAACTCTT CACTAATGCATTACATTTCCCAAATTTGTTATCCTTGGCCCTTAGGTTGAGGATGGGCAATTAAACAAAATGGTAAGAGTTGGTATTGGGAAATGATGCA TATACTTGATGTATTTGGTAGTTCTAATTGTTTTC
• Tissue: pods
• Gene name: LI_gene_193102;
• Additional information: details;

Expression of Ll_transcript_348887

FPKM

• PAB: 0
• PNAB: 4.3
• PS1: 6
• PS2: 5
• PS3: 6.8
• PW1: 4.9
• PW2: 5.7
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_348887

• Blastp: Ubiquitin carboxyl-terminal hydrolase 14 from Arabidopsis with 77.69% of identity
• Blastx: Ubiquitin carboxyl-terminal hydrolase 14 from Arabidopsis with 75.26% of identity
• Eggnog: ubiquitin carboxyl-terminal hydrolase(COG5207)
• Kegg: Link to kegg annotations (AT3G20630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442655.1)
• Pfam: Ubiquitin carboxyl-terminal hydrolase (PF00443.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;