| Id Trinity | TRINITY_DN52485_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_350034 |
| Sequence | ATTGGAAATCTCAAGATATCTATCAGTAATGTTCATATCAGATATGAAGATGCAGTCAGGTGTGACTTTGGCTAAGCTTGCTGCTGTTACAATGGATGAG CAAGGGAATGAAACTTTTGATACTAGTGGTGCTTTGGATAGATTGAGAAAGTCAGTGCATCTTGAGAGGCTAGCTCTTTATCATGATTCTGATAGGCATC CTTGGGAGATTCATAAGAGATGGGAGGATATTAGTCCAAGTGAATGGATTGAGATATTTGGAGATGGCATAAATGAACCCACTGATGATCATAAATTGGT GTCTAAGTGGGCTATGAACCGTACATATTTGGTTTATCCTATCAATGCAGTCCTACAGTATCATCGTCTTGGAAACCAAGAAAGAATAAATCCAGAAATT CCATTTGAGAAAGTTTCCCTTGTCCTTACAGATGTCTCTCTTACTCTAACTGAGGCTCAGTATCATGATTGGATTAAACTTTTGGAAGTTGTTTCAAGGT ACAAGATATATATGGAAGTTTCTCATTTACGACCAGCAGTTCCTATTTCGAAGGCTCCTTATTTATGGTGGCAGTATGCTGCACATGCTATGCAGCAGCA GAAGATGTGTTACCGCCTGTCTTGGGACCAAATTCGTCATCTTTGCCAGCAGCGGCGGCGATACATTCAGTTGTATGTGGCTTCTCTTCAACATTCCGCA CATGTTAACCTTGCTGAAATCAGAGAAATAGAAAGGGATCTTGATTCAAAAGTGATTCTTCTTTGGAGGCTACTAGCTCATGCCAAGGTTGAATCTGTGA AATCAAAGGTAGCAGCTGAAGAAAGGAGGATCAAGAAAAAAAGCTGGTTTTCATTTAGTTGGGGTGCTGACACAGAAGAGGTTTCTTTGAATGACGCTTC TGAGGGGTCACAGCTTACAGAAGAAAGATTGACTAAAGAGGAATGGCAAGCAATCAATAAGTTATTAAGTTACCAGCCTGACGAGGAGTTGATTGTACGC TCTGCGAATGATATGCAAAGTATGGTTCAGTTTCTGGTAACTGTATCTATTGGTCAGGCTGCTGCCAGGATTATCAATGTGAATCAGACGGAAATTCTCT GTAGTCGATTTGAGCAACTTCAAGTGTCAACTAAGTTTAAGCATCGCAGTGTTTACTGTGATGTGTTACTAAAATTTTATGGTTTATCCGCTCCTGAAGG TTCTCTTACCCAGAGTGTCTATAGTGAGAAGAAGGTGAATGCCTTAGTGGCTAGTTTTGTGCACTTGCCAGTTGGGGAGAATATTGACTGGAGATTGTCT GCTACTATTGCTCCCTGCCATGTTACGGTTTTGATGGAAAGTATTGACCGTGTCTTAGAATTTGTGAAGCGAAGTAAGGCAGTCAGTCCTACTGTTGCAT TGGAGACAGCTACTGCCTTGCAGCGAGCTAAGCCATTCCTAATCTACTGCAGTATTAGTTTGTTTGCTGGCACATGTAGTAGAGGCATTCTCCACTCCAG CAGTAGCAGATGTAGAATCTGAAAGGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_193120; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350034
| Blastp | Putative vacuolar protein sorting-associated protein 13A from Dictyostelium with 21.68% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 13 from Saccharomyces with 24.71% of identity |
| Eggnog | Vacuolar Protein(COG5043) |
| Kegg | Link to kegg annotations (DDB_G0286725) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418850.1) |
| Pfam | Vacuolar sorting-associated protein 13, N-terminal (PF16908.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |