Id Trinity | TRINITY_DN52487_c1_g1_i17 |
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Name Transcript | Ll_transcript_350567 |
Sequence | TAAAACTGACACCAATTTTCTCTCTCTCTCTCTCTTTCTTTCTTTGTCTGTAAGAACTCATCAGACTCTGTTCTTTTTCTTTTCTGCATTCTCTCTCTTT CATTTCCCTCTTCTAACCAACCTCATAGAGCCACCGGCGAGTCCATCCTCGCCGGATTTTGCTCTGAAATCTCGCCGGAATCTTCATTTTTTCCGATTTC ACCTCTAAATTCTAATCCAAGGTGTTTTTGGCTCCAAATTTTGTACAAAATTTAGATTTTTATCGTTTTTCTGTGGTGGGGTGAGCAATGCTGAGATGAA GATATGATTCAAGGGTGGTTTTGCTGAAAATATGATGAGATCTTCAGTTTTTGTTGAATTTGATGACAGGGAATAGAGTCTGATAAAGCTAGCAAGTAAG GAGATTTTTTATAATAGTTATCTTTCGAGATTTCCTGGATTTTGACCTGCACAATGCCTTTCGAAGTAACGGACCGGAGTGGTGTCTCAGCCACATCCAA CTTTTTTGGTGATATGTCCTTTTCTCCCGAGAGGAATGTTGGATTACAGAATCTAAAATCCATTAATGACAACTACCCACAAGGAAATAATGAAATGGCA GCATCTTCCGGCAGCATTTTGAGTGCTTCATTGCCCCTTAAAATAAATGCGAAAATTGGCTTTGTAATGCCCCAGACTAGTCTATCTGGGGAAATTACAG AAAACCGGCATTTTGGTGGAGAAGAAGGCATTGCAGGTGTGCAGAAGGATTCCCAGGAAAGACTTAATTATAACCCGAGATCATGGTCTGATGTGCACAT ACAACCAGCATCTGGCTCGTATGGTGTAATTGGGAACAAGATCGTCACAAATGTGGTCTCTCATGAAAGTAGTTTATTCTCAAGCTCGCTGTCTGATTTA TTTACCAAAAAGTTGAGGTTATCGAGGAATGGTGCTCTGCTTGATCAGCCCAGTAATATTGGTTCCCTTCATGAGAAAGAGCCATATAAGTCTCTTGAAG AAATTGAGGCTGACACTATTCGGAATCTCCTTCCTGATGAAGATGATCTGTTTTCTGGCGTCGATGGCGAGTTAGGAGGCAGTGCTCATGCTAGAACAAG TGATGATTTTGAAGACTTTGATTTGTTCAGCAGTGGTGGAGGCATGGAGTTGGAAGGAGATGCTCATCTGGTTTCAGGAAAAAGAACCACTTGCGTGGGT GCAGATCTCGGTTACTATAATAAAGGAAATTTTCCTTTTGGTGAACAGTCTTATAGAACACTTTTTGTTAGAAACATTAATAGCGATGTTGAAGACTCTG AGCTAAAGGCTCTCTTTGAGCAATATGGTGATATCAGGACCATGTATACTGCCGGCAAGCATCGTGGGTTTGTTATGATTTCTTATTATGACATTAGGGC TGCACAAAATGCAATGAAAGCACTCCAAAATAGGCCATTGAGGTCTAGGCATCTGGATATACATTATTCATTTCCGAAGGTCAATGCTCCAGACAAGGAT ATTGGTCATGCCACACTGATGATATCTGGTCTTAATTCATCTGTTTCGAATGATGAACTTAAACATATTTTTGGGTTTTATGGAGAAATTAAAGAAATAT ACGAATATCCAGAAATGAATCATCACAAATTTATAGAGTTTTATGATGTGCGAGCTGCAGAAGCTGCTCTTCATGCACTGAACAGAATTGGCATTGCTGG GAAGCAGATCAAGCTTGAACCTTGCCATCCTAGTCTGGTGCAGCAGTGTCGTAAGGGGCAAGGTGATGCCGGTCTTGGTCAAAGTAGTATTGACAACTTA TCATTAAAACATAAGGCAAACGTGTCTTCTGGAGTACTTGGATCTGGCTGCTTGGGAAATGGATACAATCAGGGATTTCCATCTGCAATGCGGCAAAATT TCAATGCATTATTTCAATCGAATTCTACCATTCACAACACAGTGGGAGGGACATCTGCTGCAAAATTGTCTAGCTTTCGTGAGTCCAGTAACATTGCCGA TGCAATGAAATTTGCATCTAGTCCACGATTTCGTCCTCATTCCTCACCCGAGTATCATGGTAGTTTGGCTAATGGTAGTCCTTATAACTTTTCAAGCACC ATTAGCAACATGGGTAGCAATATTGGGACTGCAACAACAGAAGCCTCTAACGGCAGGCACATCCAGGGAATGGGCTCAGCAGAGTATAATGCAGGAGGGG CATCAGGAAATGGAATCCGCCCACATAATGGCCTTTACCATATGTGGAACGGCTCCAGTTTGCATCAGAAACCTTCATCAGGTGCCGTGCTCTGGCAGAA AACACCATCATTTGTTAATGGTGCTTGTGATCCGAGCCTTTCACAGATGCCAAGCTTTTCCCGAACACCGCCTAAGATGCTGAGAACACCATCTATAGGC CATCATGTTGGATCAGCACCAGTTGTTACAGTCTCACCCTGGGAAAAGCAACATTCCTACTTCGGGGAGTCCCCTGAAGCTTCTGGTTTTCACTTGGGTT CTTTAGGAAGTGGAGGTTTTCACCGTTCCTGGCAATTGCATTCACCAGATTTATCTTCT BLAST |
Tissue | pods |
Gene name | LI_gene_193131; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350567
Blastp | Protein MEI2-like 4 from Arabidopsis with 40.64% of identity |
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Blastx | Protein MEI2-like 4 from Arabidopsis with 39.81% of identity |
Eggnog | Rna-binding protein(ENOG4111R9F) |
Kegg | Link to kegg annotations (AT5G07290) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432854.1) |
Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |