Ll_transcript_350554

• Id Trinity: TRINITY_DN52487_c1_g1_i6
• Name Transcript: Ll_transcript_350554
• Sequence: TATGGATTATAAAAGAGATTATTTTTTTCTTCGATAGGTGTACTGGAGACAAACATATTTAAACTGAGAATATCCATAAATATGTGAGATTAATTGTTCC TGTGAATATTTTTTCTATTCAAACTTAAACTAGATGTCTTAAATTAAGAGGAATCAACAATGTTAAAGAAAAAAAGAAAGAAGCCAACTAACACCCATTT CTCTCTCTTTGTCTTTGTCTTTAAGACTCTCATCAGACTCTGTTCTTTTTCTTTCTTGTTGCGTTGTCTCATTCATTTCCCTCTTAACCAACAACCTCAT TGAGCCACCGGCGAGACATTCCTCGCCGGAATTTTGCTCTGAAAACTCGCCGGAATCTTTATTTTTTGGATTTTACCTCCAAATTCTCATCCAAGGTGTT GTTTGGCTCTAAATTCTATACAATTTTGTTTTTTTCTCGTTTTTCTGTGGTGGGGTGAGCAATGCTGAGATGAAGATAACGTTGGAGGGTGGTTTTGCTG AAAATATGATGAGATCTTCAGTTTTTGTTGAATTTGCTATGCTGTAAACGTTGGAAAGATTCCGTTTTTTGTTTGTTTCTGTCATCTCTTGTTTTTAGAT GACAAAGGTGCTGAATTGGTGGAGAAACATAAGGAAGGATAACTTTTGAAGTTTTTTTGGTTCCTAGATTCTGTTCAAAATTGAAGGGTAAAAAAGGTGT GAAATTTTGTAATAAGCTTCAAAATTTATCAAAATTATGTTTTTTTGTGTCTATTTTTGTTTTGTTCGGTGGGGTTATGTAATTGTTACTAGCTTTTTCT CTTTGGATGCACTAGTCATGTTTTTTTACGTGTTTTAAGGGTTAGAACCCCTTTATGTTCAGACCCATCTGTGAAATTTTGTTTTTTTGTTTTGATCTGT TAAGGTTTCAGGCTTTCCATGTGAATTTCTCTCTTTTTATGCCTTATTTCATGTCAGAATCAAGGTGGAATTGTGTACTTAAGCTAGATACCTTTCTTTC TTCAAGTGTGGTTGGTTTTGAGAAAAAGGAAAGGTGCTTTGAAATAGAAGATGACAGGGAATAGAGTCTGACAAAGCTAGCAAGTGAGGAGGTTTTTTGT AATAGTTGTCTGCCGAGATTTTCTGGACTCTGATCTGCACAATGCCTTCTGAAATAACGGAACAGCGGGGTCTTTCAGCCACATCCCGTTTTCGTGATGA CATCTCCTTTCCTCCTGAGATGAATGTTGGATTACAGAAGCTAAAATCCAATCATGACAACTACCCTCAAGGAAAGAGTGAAATGGCAGCATCTCCTGGC GGCATTTTGAGTGCTTCATCACCCCTTCAAACAAATGCGAAAACTTGCTTGCCGTTGTCTCAGACTAGTCTATCCGGGGAAATTACAGAAAACCTACATT TTGATGGAGAAGAAGGCATCACAGACGTGCTGAAGAATACCCATGAACGGCTTAATTATAACCTGAGATCATGGTCTGATGTGCATATGCAATCATCTGG CTCGTATGGTTTAATTGGGAAGAAGACTCTCACCAATGTGGCCTCTCGTGAAAGTAGCCTATTCTCGAGCTCACTGTCTGATATGTTTAGCCAAAAGTTG AGGTTGTTGGGGAACGGTGTTCTATCTGGTCAGCCCATTAATATTGGTTCCCTTCCCGAGGAAGAACCATATAAGTCTCTTGAAGAAATTGAGGCCGACA CTATTGGGAATCTTCTTCCTGATGAAGACGATCTGTTTTCTGGTGTCGCTGACGAGTTAGGTGGCAGTTTACATGCTAGAACAAGTGACGATTTTGATGA TTTTGATTTGTTCAGCAGCAGTGGAGGCATGGAGTTGGAAGGGGATGCACATCTAGTTTCAGAAAAAAGAACGAGTTACATGGGTGTTGATCTCGGTCAC TATTTTAAAGGGAAAGTTCCTTTTGGTGAACAGTCTTCTAGAACACTTTTTGTCAGAAACATTAACAGCAATGTAGAAGACTCTGAGCTAAAGGCTCTCT TTGAGCAATACGGTGATATCCGGACCCTTTATACTGCCTGCAAGCTTCGTGGGTTTGTTATGATTTCTTATTATGACATTAGGGCTGCACAAAATGCAAT GAAAGCACTCCAAAATAGGCCATTGAGGTCTAGGCATCTGGATATACATTATTCATTTCCGAAGGTCAATGCTCCAGACAAGGATATTGGTCATGCCACA CTGATGATATCTGGTCTTAATTCATCTGTTTCGAATGATGAACTTAAACATATTTTTGGGTTTTATGGAGAAATTAAAGAAATATACGAATATCCAGAAA TGAATCATCACAAATTTATAGAGTTTTATGATGTGCGAGCTGCAGAAGCTGCTCTTCATTCACTGAACAGGATTGGCATTGCCGGGAAGCAGATCAAGCT TGAACCTGGCCATCCTAGTCTGATGCAGCAGTCTCATAACGGGCAAGATGAACCAAGTCTTGGTCAAAGTATTATTGACAACTTATCATTAACACACAAG GTTGGATCTGGCTGCTTGGAAAATAGATATAATCAGGGTTTTCAATCTGCAATGCGGCAACCTTTGAATGCATTTGTTGATAATGAATTCTTTCGAGCGA ATTCTAGCATTCACAACACAGTGGGAGGGGCATCTGCTGCAAAAGTGTCCAGCTTCCGTGAGTCCAGTGACATCGCTGATGGAGTGAAATTTGCATCTAG TCCGATATTTCACCCTCATTCCTTACCTGAGTACCATGGTAGTTTAGCTAATGGTAGTCCTTATAATTTTTCAAGCACCGTTAGCAACATGGGCAGCAAT ACGGTTACTGCAACAACAGAAGCCTCTGATGGCAGGCGCATCCAGGGAATGGGCTCAACTAGGAACATGGTAGAGTTTAATGCTGGAGGAAATGGAATCC ACCCAGATGACGGGCTTTATCGTATGTGGAACAACTCCAGTTTTCATCAACAACCTTCATCTGATGCCGTGCCCTGGCAGAAAACACCATCACTTGTTAA TGGTGCTTCTTCTCCGGGCCTTCCACAGATGCCAAGCTATGCCAGAACACAGCCTCAGATGCTGAGAAAACCACATATGGACCATGTTGGATCAGCACCA GTTTTTACAGCCTCGCCCTGGGAAAGGCAACATTCTATCTTGGGAGAGTCCCCTGAAGCTTCTGGTTTTCTCTTGGGTTCTTTAGGAAGTGGCGGTTTTC ATGGTTCCTGGCAAATGCATTCACCAGATTTATCTTCTCACATGTTTTCTCATGTTGGTGGGAGTAGCACTGAACTGACGCCGAATGCTGTGCAGTCCTC TTCTACGAA
• Tissue: pods
• Gene name: LI_gene_193131;
• Additional information: details;

Expression of Ll_transcript_350554

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.8
• PS3: 0.7
• PW1: 0.1
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350554

• Blastp: Protein MEI2-like 4 from Oryza sativa with 38.07% of identity
• Blastx: Protein MEI2-like 4 from Arabidopsis with 40.43% of identity
• Eggnog: Rna-binding protein(ENOG4111R9F)
• Kegg: Link to kegg annotations (9271988)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417075.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;