Ll_transcript_350557

• Id Trinity: TRINITY_DN52487_c1_g1_i9
• Name Transcript: Ll_transcript_350557
• Sequence: TATGGATTATAAAAGAGATTATTTTTTTCTTCGATAGGTGTACTGGAGACAAACATATTTAAACTGAGAATATCCATAAATATGTGAGATTAATTGTTCC TGTGAATATTTTTTCTATTCAAACTTAAACTAGATGTCTTAAATTAAGAGGAATCAACAATGTTAAAGAAAAAAAGAAAGAAGCCAACTAACACCCATTT CTCTCTCTTTGTCTTTGTCTTTAAGACTCTCATCAGACTCTGTTCTTTTTCTTTCTTGTTGCGTTGTCTCATTCATTTCCCTCTTAACCAACAACCTCAT TGAGCCACCGGCGAGACATTCCTCGCCGGAATTTTGCTCTGAAAACTCGCCGGAATCTTTATTTTTTGGATTTTACCTCCAAATTCTCATCCAAGGTGTT GTTTGGCTCTAAATTCTATACAATTTTGTTTTTTTCTCGTTTTTCTGTGGTGGGGTGAGCAATGCTGAGATGAAGATAACGTTGGAGGGTGGTTTTGCTG AAAATATGATGAGATCTTCAGTTTTTGTTGAATTTGCTATGCTGTAAACGTTGGAAAGATTCCGTTTTTTGTTTGTTTCTGTCATCTCTTGTTTTTAGAT GACAAAGGTGCTGAATTGGTGGAGAAACATAAGGAAGGATAACTTTTGAAGTTTTTTTGGTTCCTAGATTCTGTTCAAAATTGAAGGGTAAAAAAGATGA CAGGGAATAGAGTCTGACAAAGCTAGCAAGTGAGGAGGTTTTTTGTAATAGTTGTCTGCCGAGATTTTCTGGACTCTGATCTGCACAATGCCTTCTGAAA TAACGGAACAGCGGGGTCTTTCAGCCACATCCCGTTTTCGTGATGACATCTCCTTTCCTCCTGAGATGAATGTTGGATTACAGAAGCTAAAATCCAATCA TGACAACTACCCTCAAGGAAAGAGTGAAATGGCAGCATCTCCTGGCGGCATTTTGAGTGCTTCATCACCCCTTCAAACAAATGCGAAAACTTGCTTGCCG TTGTCTCAGACTAGTCTATCCGGGGAAATTACAGAAAACCTACATTTTGATGGAGAAGAAGGCATCACAGACGTGCTGAAGAATACCCATGAACGGCTTA ATTATAACCTGAGATCATGGTCTGATGTGCATATGCAATCATCTGGCTCGTATGGTTTAATTGGGAAGAAGACTCTCACCAATGTGGCCTCTCGTGAAAG TAGCCTATTCTCGAGCTCACTGTCTGATATGTTTAGCCAAAAGTTGAGGTTGTTGGGGAACGGTGTTCTATCTGGTCAGCCCATTAATATTGGTTCCCTT CCCGAGGAAGAACCATATAAGTCTCTTGAAGAAATTGAGGCCGACACTATTGGGAATCTTCTTCCTGATGAAGACGATCTGTTTTCTGGTGTCGCTGACG AGTTAGGTGGCAGTTTACATGCTAGAACAAGTGACGATTTTGATGATTTTGATTTGTTCAGCAGCAGTGGAGGCATGGAGTTGGAAGGGGATGCACATCT AGTTTCAGAAAAAAGAACGAGTTACATGGGTGTTGATCTCGGTCACTATTTTAAAGGGAAAGTTCCTTTTGGTGAACAGTCTTCTAGAACACTTTTTGTC AGAAACATTAACAGCAATGTAGAAGACTCTGAGCTAAAGGCTCTCTTTGAGCAATACGGTGATATCCGGACCCTTTATACTGCCTGCAAGCTTCGTGGGT TTGTTATGATTTCTTATTATGACATTAGGGCTGCACAAAATGCAATGAAAGCACTCCAAAATAGGCCATTGAGGTCTAGGCATCTGGATATACATTATTC ATTTCCGAAGGTCAATGCTCCAGACAAGGATATTGGTCATGCCACACTGATGATATCTGGTCTTAATTCATCTGTTTCGAATGATGAACTTAAACATATT TTTGGGTTTTATGGAGAAATTAAAGAAATATACGAATATCCAGAAATGAATCATCACAAATTTATAGAGTTTTATGATGTGCGAGCTGCAGAAGCTGCTC TTCATTCACTGAACAGGATTGGCATTGCCGGGAAGCAGATCAAGCTTGAACCTGGCCATCCTAGGTTTGCAAAATGGTGGCTATTTCCCACTGCTTTTTA TTTTTTATATTTATTTTGTTCTCTACTTCGTAGCAGCTCTTGTTACAGTTTCCTATGTTTTATGTGGCTTTCTAAATACGTTTTGTGGAAGAAAATTTAT TTTGGATATGTATATTTATTATTTCCACCTTTAATAGTTTTTTCGCTTTCAGTGGTTAATGGAGTGCAAAGTTGTTATAGATAATCTTGAAGGAAAAGTA CTTCCAGTTCTACGAAATTATTTTCTTCTGTTAACATCATAAAATCATTGCTTCTGTAGTCTGATGCAGCAGTCTCATAACGGGCAAGATGAACCAAGTC TTGGTCAAAGTATTATTGACAACTTATCATTAACACACAAGGTTGGATCTGGCTGCTTGGAAAATAGATATAATCAGGGTTTTCAATCTGCAATGCGGCA ACCTTTGAATGCATTTGTTGATAATGAATTCTTTCGAGCGAATTCTAGCATTCACAACACAGTGGGAGGGGCATCTGCTGCAAAAGTGTCCAGCTTCCGT GAGTCCAGTGACATCGCTGATGGAGTGAAATTTGCATCTAGTCCGATATTTCACCCTCATTCCTTACCTGAGTACCATGGTAGTTTAGCTAATGGTAGTC CTTATAATTTTTCAAGCACCGTTAGCAACATGGGCAGCAATACGGTTACTGCAACAACAGAAGCCTCTGATGGCAGGCGCATCCAGGGAATGGGCTCAAC TAGGAACATGGTAGAGTTTAATGCTGGAGGAAATGGAATCCACCCAGATGACGGGCTTTATCGTATGTGGAACAACTCCAGTTTTCATCAACAACCTTCA TCTGATGCCGTGCCCTGGCAGAAAACACCATCACTTGTTAATGGTGCTTCTTCTCCGGGCCTTCCACAGATGCCAAGCTATGCCAGAACACAGCCTCAGA TGCTGAGAAAACCACATATGGACCATGTTGGATCAGCACCAGTTTTTACAGCCTCGCCCTGGGAAAGGCAACATTCTATCTTGGGAGAGTCCCCTGAAGC TTCTGGTTTTCTCTTGGGTTCTTTAGGAAGTGGCGGTTTTCATGGTTCCTGGCAAATGCATTCACCAGATTTATCTTCTCACATGTTTTCTCATGTTGGT GGGAGTAGCACTGAACTGACGCCGAATGCTGTGCAGTCCTCTTCTACGAA
• Tissue: pods
• Gene name: LI_gene_193131;
• Additional information: details;

Expression of Ll_transcript_350557

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.7
• PS2: 0.2
• PS3: 0.6
• PW1: 0.4
• PW2: 0.2
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350557

• Blastp: Protein MEI2-like 5 from Arabidopsis with 49.55% of identity
• Blastx: Protein MEI2-like 2 from Oryza sativa with 54.65% of identity
• Eggnog: Rna-binding protein(ENOG4111R9F)
• Kegg: Link to kegg annotations (AT1G29400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417075.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;