| Id Trinity | TRINITY_DN52491_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_348578 |
| Sequence | AAATATCATGCCAAAAAAGAGTCGAAGAACCATCACTAATGTCCTTCCATATATGAGAGTCCAACCAACCATGTTGGTTTCCTCTCGTGCCACCTATCTT ACAAAGATCCCTCCACCACCTCGAAGTCAACTCTAAATCAAAATGAAACCTCCTTGATCCATATTTTGATTCAATCGTGTTCACCCAAGGAGATTCTGGC TCTAACAACCTTCTCCGCTTCCACTTCTACAACAATGCATCATTAAACTTCCCAAGATCCTTATTTAGAGGCTGATGGTTATTGCTACCGTTTCTCGTCG GGTTTCGCCATGAAGTTTTGAACCATTTTTTCCAAGCAAAGTGACTTCGTTCATCTTTCAACTTTGTTGTTGTTGGATAGAGTTTTGGCACTGGCGGTAG AGATTGGATTCTTCGATGAGGAAGTTTTTGAAACATCGAGAACTTCCCGATTAAAGATCTCGGCCACGACTCCAACAATGGTGGCTTTGTTGAATAGTTT CCCATCATCGCCGTAGTGGCTTCCCCCACCCTCTTTGTATGGATATCAATTGGTTGAATCTTCATCAGAGGCATAATTGTAAAAATGGTAAGAACAAATA TTTTCAACCGATATCCATTTGCGAGTTGAATTGTTTTCAACCGATATCGCATTTAGGGTTCATTTGCGAGTTGAATCTAGGAGGGAAAGAGAATAGTTTA CAACCATGAAATATATTGATGGCTCGAGATTTTTATTTATATTCATTTCCCTCCAAAATTTAACTTCCAAACCCGAGAAAAGAAATGTTGAAGAGCAGGG TTAAGGTGACAGGTGGCAGTCGGAAAGTGCGTCTGTGACGCATGCAAGTGCCCAACACAAAATTCGACTTGGAAACTTTCATTATCACAATTATTATTTA TTTATTCCAATTCCACACCATTTCTCTGAAAAACCAAACTTCATAACCACGTTTCACTCGAACAACAACAACACAGTGAAATGGCGAGTCCAGTGGAAGA AGCTATTTCCATAGAACTTCCTGCGCCACCTGGTTGGAAGAAGAAGAAGAAGGTCCACTTCATTTTTCCTCTTTTTTCCCGATTTTTTCACTATTAATTT TTTTGGAATTTGAATCCCAAGTTATCGTAATTGATTTTTTCTTGCTGAATTTTGATGTGGGTTTCGATTATTTTTCATGATTTCTAAGACTAGAGTTTGA TGTTGAGCTCATGATACCTCACCTAGGGTTTTTCCCCATTTATTTATTTCTTTGAATTGTCACATGCTGCATACTTATGCTTCGAATTTCACATCAAAGC TTTAGGCTTTTTGTGTTCTGAATTCAGAAAATTATATAGCTGCTGAATGTTAACTGTTAAGTTCCCTGTTATGGTTTTCTAGGTGTGTCGTATATTTTCA TATAAGGAAATGGATTTTTGATGGATTCTTAATGTGTCTGATTTAATATTTCCATTAATCATTTTATATTTCCCAAAATCGGCCAATTTCGGAAGAGGGT GGCAGGGCGCAGCTTACGGTTTGAGCATTGTTTCTAAGGGAACTGCATTCAAATTTTCTGTTTGATGGGGCTAAGGATTGTTTTTTCTTTTCTTTTTCTG TGTGAAGTTACCAAAAGTATTGTTCTTTGGAACTAGTAATTGTGACTGAAGAAGTTTGCAGCACATAGAGGACTTCAATTTTGTGTGTGTGGAAATTTCA CACAAAACTGTGGCTTACATTGTGCAAAACACTCACTTTGATTTTCTAATTTTTAAAATTGGAACACGTGATTGGACTTTATTGCTCCTGTTCTTAGTGT TTGTATCATTGATCCTACTTTGCCTTTGGACATGGAAACTCTTCCAAACGTGATCTTTTATGTGTATGGGATAATGATATGTAGAGTTGCTCTTATAAAA TATGATTTCTAATGTTGTCGGCAGTGTTTATTCGTTGATTCTAGGGATAAATCTATTGGGGCAATACTTCATAGTCCAAATGTTTACAGCCCACTTTCAC ATGGTTCTGGGTTGTCGATCAAAAAGGGACTCAAACCTTTATAACCAACTAGTAAACTTGGATTTCCCTCCCTCCAGATTGCCTATCTTTTCCATTCTAA CATGTGCCATAGTTGCCAAATTAATTCCCTTTTAAGAATAATAGACAATAGATGAACATATGTCTTGCTTTTTCAAAATGATAGGAAACCACATGTACTG AATTATTTACGAGTAAAGAGACCATTCCACTTTTTGAATATATGTCTTGTTTATTTATTTTCTGTAGCTGTAGGTTTAAATTAGTAAATGGTATATGTAC AGTCCATATATGTGCAATTCTGCATTTCTTGGTCACAATATGAGCTTTGGATACTCGTCTTTGCATTTTCGTCTCATTCACTCCATTCCACGGACATTCA TCTTTCCCAATTATAGCCTAAATAGATGAATTTAAGAAGGAAAAAAGTCTTCTGACTAGACTAGGTTAATTTGGTGCCATGTTACTCTCTTCCTGAAGTT TTATTGTAAAACTGCTACATATATGGGTGAAAATGAACCTTCAAATCAAAAGTTTTTGTTGAAGCTATGTGAGATTTTGGAGCTCACTACAATTCAAATG CTAAATCTTGTTGTAAACTTTAACTGTGTGAGACCAAAAGGTGACACTGTAACATAACTTTGATATGAAAGTAGTATAGGAGATCATTTTTTACAGTTCG GATTACTTTAGAACTTAATAACTTAATCTTGTATAGCTTACAACTGTTAAATTGTTGCATGTCACACATATATGATTCATAAATCATATTTCCCTTGCAG TTCTTACCAAAAAAGTCTGGAACCCCCAAAAAAAATGAGATTGTGTTCACCGCACCAACAGGGGAGGAGATTAATAACAAGAAACAACTGGATAAATATT TGAGAGCACACCCTGGTGGCCCAGCTTTAATAGAATTTTATTGGGGCACTGGTGAGACCCCAAGAAGATCATCAAGAATCAGTGAGAAGGCAAAGCTGGC TCCTCCACCAGAAAGTGAGCCCCCAAAGAAACGTGGCAAAAATGCATCGACTTCAAAAGAGGAAGCTCCTCAGGAAAAAAAAGAGGAAACAAAAGAAGTG GAAATGGAAGAAGCTGATGAAACTAAGCATGATAAAGATTTAGAGGAAGAAAATAATGTTGTGAATGAAAACCATGATGAAAAGGGACCTGGTGATGCAG ATTTGAGCGAATCCACTCATCCCGTAGAAGCTAAAGCTGGAGAAAATGCCGATGCGCCTAATGACGAGGAAAAGATAGTTGTGAAGGACTTCCAGGATGA AAAGAGAGCAGAGGATACAGATGTGAAAGAATCCACTCACCCTGGAGAAGCTAAAGATGGAGAAAATGCCGCCATACTTAATGATGGGGAAAAATCTAAC ACTGCTGATGTAGAGCTACAATTCTCAAAAGATAAAATTGATGACAACGAAGTTGAGGATTCTGAAGCTTTTCAGAATAAAGATGAAGAAAAGATTGGAC AGCCACAGGAGGAGACAAAGAAAGATGGTGAACCTGGGTTTGAAGTGGAAGGAGTGAGTGAAGAGGAACACAACAGAAGTAATCATGAGTCTGAAGGAGA GACCAAGGAAAAAGAAGCAACCAAAGTGATTGATGAACAGCAGTACAAGGTTCATGATATAAACAAGACTTCTGAAACAGAGTTGATTGTGAATGAAAGT TGATCTGGTAAGGTCAAAGCCTTGAGAAAGGAATCTAATAAACTCTTGGCTTCTGTTCTCTTACTCTATCTGAGGATTACTGTAGTTTTTGTTAATGTGA TTTATCTGCATGTTCGTTGAAGCAATTATAGACCACTATAGAGTAGCCCTATAATGTACCATACTTCTATGTATTGGATATGCATGTAGCTTCTGGTTCC CTTTGTAACGTTGTAAGGTGCTTGTAATGTGATTTGGACCTGTAATCTTGTAAAGGTCATGATCCTCTAAATACTCCATTTAGTCACATACTATTATATT TAGATCTTATTATCCGGTCAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_193170; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_348578
| Blastp | - |
|---|---|
| Blastx | Methyl-CpG-binding domain-containing protein 11 from Arabidopsis with 62.65% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440354.1) |
| Pfam | - |
| Rfam | - |
| GO | - |