Id Trinity | TRINITY_DN52491_c1_g1_i1 |
---|---|
Name Transcript | Ll_transcript_348578 |
Sequence | AAATATCATGCCAAAAAAGAGTCGAAGAACCATCACTAATGTCCTTCCATATATGAGAGTCCAACCAACCATGTTGGTTTCCTCTCGTGCCACCTATCTT ACAAAGATCCCTCCACCACCTCGAAGTCAACTCTAAATCAAAATGAAACCTCCTTGATCCATATTTTGATTCAATCGTGTTCACCCAAGGAGATTCTGGC TCTAACAACCTTCTCCGCTTCCACTTCTACAACAATGCATCATTAAACTTCCCAAGATCCTTATTTAGAGGCTGATGGTTATTGCTACCGTTTCTCGTCG GGTTTCGCCATGAAGTTTTGAACCATTTTTTCCAAGCAAAGTGACTTCGTTCATCTTTCAACTTTGTTGTTGTTGGATAGAGTTTTGGCACTGGCGGTAG AGATTGGATTCTTCGATGAGGAAGTTTTTGAAACATCGAGAACTTCCCGATTAAAGATCTCGGCCACGACTCCAACAATGGTGGCTTTGTTGAATAGTTT CCCATCATCGCCGTAGTGGCTTCCCCCACCCTCTTTGTATGGATATCAATTGGTTGAATCTTCATCAGAGGCATAATTGTAAAAATGGTAAGAACAAATA TTTTCAACCGATATCCATTTGCGAGTTGAATTGTTTTCAACCGATATCGCATTTAGGGTTCATTTGCGAGTTGAATCTAGGAGGGAAAGAGAATAGTTTA CAACCATGAAATATATTGATGGCTCGAGATTTTTATTTATATTCATTTCCCTCCAAAATTTAACTTCCAAACCCGAGAAAAGAAATGTTGAAGAGCAGGG TTAAGGTGACAGGTGGCAGTCGGAAAGTGCGTCTGTGACGCATGCAAGTGCCCAACACAAAATTCGACTTGGAAACTTTCATTATCACAATTATTATTTA TTTATTCCAATTCCACACCATTTCTCTGAAAAACCAAACTTCATAACCACGTTTCACTCGAACAACAACAACACAGTGAAATGGCGAGTCCAGTGGAAGA AGCTATTTCCATAGAACTTCCTGCGCCACCTGGTTGGAAGAAGAAGAAGAAGGTCCACTTCATTTTTCCTCTTTTTTCCCGATTTTTTCACTATTAATTT TTTTGGAATTTGAATCCCAAGTTATCGTAATTGATTTTTTCTTGCTGAATTTTGATGTGGGTTTCGATTATTTTTCATGATTTCTAAGACTAGAGTTTGA TGTTGAGCTCATGATACCTCACCTAGGGTTTTTCCCCATTTATTTATTTCTTTGAATTGTCACATGCTGCATACTTATGCTTCGAATTTCACATCAAAGC TTTAGGCTTTTTGTGTTCTGAATTCAGAAAATTATATAGCTGCTGAATGTTAACTGTTAAGTTCCCTGTTATGGTTTTCTAGGTGTGTCGTATATTTTCA TATAAGGAAATGGATTTTTGATGGATTCTTAATGTGTCTGATTTAATATTTCCATTAATCATTTTATATTTCCCAAAATCGGCCAATTTCGGAAGAGGGT GGCAGGGCGCAGCTTACGGTTTGAGCATTGTTTCTAAGGGAACTGCATTCAAATTTTCTGTTTGATGGGGCTAAGGATTGTTTTTTCTTTTCTTTTTCTG TGTGAAGTTACCAAAAGTATTGTTCTTTGGAACTAGTAATTGTGACTGAAGAAGTTTGCAGCACATAGAGGACTTCAATTTTGTGTGTGTGGAAATTTCA CACAAAACTGTGGCTTACATTGTGCAAAACACTCACTTTGATTTTCTAATTTTTAAAATTGGAACACGTGATTGGACTTTATTGCTCCTGTTCTTAGTGT TTGTATCATTGATCCTACTTTGCCTTTGGACATGGAAACTCTTCCAAACGTGATCTTTTATGTGTATGGGATAATGATATGTAGAGTTGCTCTTATAAAA TATGATTTCTAATGTTGTCGGCAGTGTTTATTCGTTGATTCTAGGGATAAATCTATTGGGGCAATACTTCATAGTCCAAATGTTTACAGCCCACTTTCAC ATGGTTCTGGGTTGTCGATCAAAAAGGGACTCAAACCTTTATAACCAACTAGTAAACTTGGATTTCCCTCCCTCCAGATTGCCTATCTTTTCCATTCTAA CATGTGCCATAGTTGCCAAATTAATTCCCTTTTAAGAATAATAGACAATAGATGAACATATGTCTTGCTTTTTCAAAATGATAGGAAACCACATGTACTG AATTATTTACGAGTAAAGAGACCATTCCACTTTTTGAATATATGTCTTGTTTATTTATTTTCTGTAGCTGTAGGTTTAAATTAGTAAATGGTATATGTAC AGTCCATATATGTGCAATTCTGCATTTCTTGGTCACAATATGAGCTTTGGATACTCGTCTTTGCATTTTCGTCTCATTCACTCCATTCCACGGACATTCA TCTTTCCCAATTATAGCCTAAATAGATGAATTTAAGAAGGAAAAAAGTCTTCTGACTAGACTAGGTTAATTTGGTGCCATGTTACTCTCTTCCTGAAGTT TTATTGTAAAACTGCTACATATATGGGTGAAAATGAACCTTCAAATCAAAAGTTTTTGTTGAAGCTATGTGAGATTTTGGAGCTCACTACAATTCAAATG CTAAATCTTGTTGTAAACTTTAACTGTGTGAGACCAAAAGGTGACACTGTAACATAACTTTGATATGAAAGTAGTATAGGAGATCATTTTTTACAGTTCG GATTACTTTAGAACTTAATAACTTAATCTTGTATAGCTTACAACTGTTAAATTGTTGCATGTCACACATATATGATTCATAAATCATATTTCCCTTGCAG TTCTTACCAAAAAAGTCTGGAACCCCCAAAAAAAATGAGATTGTGTTCACCGCACCAACAGGGGAGGAGATTAATAACAAGAAACAACTGGATAAATATT TGAGAGCACACCCTGGTGGCCCAGCTTTAATAGAATTTTATTGGGGCACTGGTGAGACCCCAAGAAGATCATCAAGAATCAGTGAGAAGGCAAAGCTGGC TCCTCCACCAGAAAGTGAGCCCCCAAAGAAACGTGGCAAAAATGCATCGACTTCAAAAGAGGAAGCTCCTCAGGAAAAAAAAGAGGAAACAAAAGAAGTG GAAATGGAAGAAGCTGATGAAACTAAGCATGATAAAGATTTAGAGGAAGAAAATAATGTTGTGAATGAAAACCATGATGAAAAGGGACCTGGTGATGCAG ATTTGAGCGAATCCACTCATCCCGTAGAAGCTAAAGCTGGAGAAAATGCCGATGCGCCTAATGACGAGGAAAAGATAGTTGTGAAGGACTTCCAGGATGA AAAGAGAGCAGAGGATACAGATGTGAAAGAATCCACTCACCCTGGAGAAGCTAAAGATGGAGAAAATGCCGCCATACTTAATGATGGGGAAAAATCTAAC ACTGCTGATGTAGAGCTACAATTCTCAAAAGATAAAATTGATGACAACGAAGTTGAGGATTCTGAAGCTTTTCAGAATAAAGATGAAGAAAAGATTGGAC AGCCACAGGAGGAGACAAAGAAAGATGGTGAACCTGGGTTTGAAGTGGAAGGAGTGAGTGAAGAGGAACACAACAGAAGTAATCATGAGTCTGAAGGAGA GACCAAGGAAAAAGAAGCAACCAAAGTGATTGATGAACAGCAGTACAAGGTTCATGATATAAACAAGACTTCTGAAACAGAGTTGATTGTGAATGAAAGT TGATCTGGTAAGGTCAAAGCCTTGAGAAAGGAATCTAATAAACTCTTGGCTTCTGTTCTCTTACTCTATCTGAGGATTACTGTAGTTTTTGTTAATGTGA TTTATCTGCATGTTCGTTGAAGCAATTATAGACCACTATAGAGTAGCCCTATAATGTACCATACTTCTATGTATTGGATATGCATGTAGCTTCTGGTTCC CTTTGTAACGTTGTAAGGTGCTTGTAATGTGATTTGGACCTGTAATCTTGTAAAGGTCATGATCCTCTAAATACTCCATTTAGTCACATACTATTATATT TAGATCTTATTATCCGGTCAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_193170; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_348578
Blastp | - |
---|---|
Blastx | Methyl-CpG-binding domain-containing protein 11 from Arabidopsis with 62.65% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440354.1) |
Pfam | - |
Rfam | - |
GO | - |