Ll_transcript_348580

• Id Trinity: TRINITY_DN52491_c1_g1_i2
• Name Transcript: Ll_transcript_348580
• Sequence: CAATTTTAAATTTTGTTTTCTTTATTGTTTTATTTTCCTCTTCGGTTTTGTGATGCTATTGTTTTGTTTTTGTGCATTTGGAAAGTGAAATGGCGAGTCC AGTGGAAGAAGCTATTTCCATAGAACTTCCTGCGCCACCTGGTTGGAAGAAGAAGAAGAAGTTCTTACCAAAAAAGTCTGGAACCCCCAAAAAAAATGAG ATTGTGTTCACCGCACCAACAGGGGAGGAGATTAATAACAAGAAACAACTGGATAAATATTTGAGAGCACACCCTGGTGGCCCAGCTTTAATAGAATTTT ATTGGGGCACTGGTGAGACCCCAAGAAGATCATCAAGAATCAGTGAGAAGGCAAAGCTGGCTCCTCCACCAGAAAGTGAGCCCCCAAAGAAACGTGGCAA AAATGCATCGACTTCAAAAGAGGAAGCTCCTCAGGAAAAAAAAGAGGAAACAAAAGAAGTGGAAATGGAAGAAGCTGATGAAACTAAGCATGATAAAGAT TTAGAGGAAGAAAATAATGTTGTGAATGAAAACCATGATGAAAAGGGACCTGGTGATGCAGATTTGAGCGAATCCACTCATCCCGTAGAAGCTAAAGCTG GAGAAAATGCCGATGCGCCTAATGACGAGGAAAAGATAGTTGTGAAGGACTTCCAGGATGAAAAGAGAGCAGAGGATACAGATGTGAAAGAATCCACTCA CCCTGGAGAAGCTAAAGATGGAGAAAATGCCGCCATACTTAATGATGGGGAAAAATCTAACACTGCTGATGTAGAGCTACAATTCTCAAAAGATAAAATT GATGACAACGAAGTTGAGGATTCTGAAGCTTTTCAGAATAAAGATGAAGAAAAGATTGGACAGCCACAGGAGGAGACAAAGAAAGATGGTGAACCTGGGT TTGAAGTGGAAGGAGTGAGTGAAGAGGAACACAACAGAAGTAATCATGAGTCTGAAGGAGAGACCAAGGAAAAAGAAGCAACCAAAGTGATTGATGAACA GCAGTACAAGGTTCATGATATAAACAAGACTTCTGAAACAGAGTTGATTGTGAATGAAAGTTGATCTGGTAAGGTCAAAGCCTTGAGAAAGGAATCTAAT AAACTCTTGGCTTCTGTTCTCTTACTCTATCTGAGGATTACTGTAGTTTTTGTTAATGTGATTTATCTGCATGTTCGTTGAAGCAATTATAGACCACTAT AGAGTAGCCCTATAATGTACCATACTTCTATGTATTGGATATGCATGTAGCTTCTGGTTCCCTTTGTAACGTTGTAAGGTGCTTGTAATGTGATTTGGAC CTGTAATCTTGTAAAGGTCATGATCCTCTAAATACTCCATTTAGTCACATACTATTATATTTAGATCTTATTATCCGGTCAAAAA
• Tissue: pods
• Gene name: LI_gene_193170;
• Additional information: details;

Expression of Ll_transcript_348580

FPKM

• PAB: 14.5
• PNAB: 18
• PS1: 35.5
• PS2: 32.5
• PS3: 42.6
• PW1: 18.5
• PW2: 21.6
• PW3: 23.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_348580

• Blastp: Methyl-CpG-binding domain-containing protein 11 from Arabidopsis with 53.73% of identity
• Blastx: Methyl-CpG-binding domain-containing protein 11 from Arabidopsis with 64.79% of identity
• Eggnog: methyl-CpG binding(ENOG410YRVP)
• Kegg: Link to kegg annotations (AT3G15790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440338.1)
• Pfam: Methyl-CpG binding domain (PF01429.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;