Ll_transcript_348581

• Id Trinity: TRINITY_DN52491_c1_g1_i3
• Name Transcript: Ll_transcript_348581
• Sequence: AAATATCATGCCAAAAAAGAGTCGAAGAACCATCACTAATGTCCTTCCATATATGAGAGTCCAACCAACCATGTTGGTTTCCTCTCGTGCCACCTATCTT ACAAAGATCCCTCCACCACCTCGAAGTCAACTCTAAATCAAAATGAAACCTCCTTGATCCATATTTTGATTCAATCGTGTTCACCCAAGGAGATTCTGGC TCTAACAACCTTCTCCGCTTCCACTTCTACAACAATGCATCATTAAACTTCCCAAGATCCTTATTTAGAGGCTGATGGTTATTGCTACCGTTTCTCGTCG GGTTTCGCCATGAAGTTTTGAACCATTTTTTCCAAGCAAAGTGACTTCGTTCATCTTTCAACTTTGTTGTTGTTGGATAGAGTTTTGGCACTGGCGGTAG AGATTGGATTCTTCGATGAGGAAGTTTTTGAAACATCGAGAACTTCCCGATTAAAGATCTCGGCCACGACTCCAACAATGGTGGCTTTGTTGAATAGTTT CCCATCATCGCCGTAGTGGCTTCCCCCACCCTCTTTGTATGGATATCAATTGGTTGAATCTTCATCAGAGGCATAATTGTAAAAATGGTAAGAACAAATA TTTTCAACCGATATCCATTTGCGAGTTGAATTGTTTTCAACCGATATCGCATTTAGGGTTCATTTGCGAGTTGAATCTAGGAGGGAAAGAGAATAGTTTA CAACCATGAAATATATTGATGGCTCGAGATTTTTATTTATATTCATTTCCCTCCAAAATTTAACTTCCAAACCCGAGAAAAGAAATGTTGAAGAGCAGGG TTAAGGTGACAGGTGGCAGTCGGAAAGTGCGTCTGTGACGCATGCAAGTGCCCAACACAAAATTCGACTTGGAAACTTTCATTATCACAATTATTATTTA TTTATTCCAATTCCACACCATTTCTCTGAAAAACCAAACTTCATAACCACGTTTCACTCGAACAACAACAACACAGTGAAATGGCGAGTCCAGTGGAAGA AGCTATTTCCATAGAACTTCCTGCGCCACCTGGTTGGAAGAAGAAGAAGAAGTTCTTACCAAAAAAGTCTGGAACCCCCAAAAAAAATGAGATTGTGTTC ACCGCACCAACAGGGGAGGAGATTAATAACAAGAAACAACTGGATAAATATTTGAGAGCACACCCTGGTGGCCCAGCTTTAATAGAATTTTATTGGGGCA CTGGTGAGACCCCAAGAAGATCATCAAGAATCAGTGAGAAGGCAAAGCTGGCTCCTCCACCAGAAAGTGAGCCCCCAAAGAAACGTGGCAAAAATGCATC GACTTCAAAAGAGGAAGCTCCTCAGGAAAAAAAAGAGGAAACAAAAGAAGTGGAAATGGAAGAAGCTGATGAAACTAAGCATGATAAAGATTTAGAGGAA GAAAATAATGTTGTGAATGAAAACCATGATGAAAAGGGACCTGGTGATGCAGATTTGAGCGAATCCACTCATCCCGTAGAAGCTAAAGCTGGAGAAAATG CCGATGCGCCTAATGACGAGGAAAAGATAGTTGTGAAGGACTTCCAGGATGAAAAGAGAGCAGAGGATACAGATGTGAAAGAATCCACTCACCCTGGAGA AGCTAAAGATGGAGAAAATGCCGCCATACTTAATGATGGGGAAAAATCTAACACTGCTGATGTAGAGCTACAATTCTCAAAAGATAAAATTGATGACAAC GAAGTTGAGGATTCTGAAGCTTTTCAGAATAAAGATGAAGAAAAGATTGGACAGCCACAGGAGGAGACAAAGAAAGATGGTGAACCTGGGTTTGAAGTGG AAGGAGTGAGTGAAGAGGAACACAACAGAAGTAATCATGAGTCTGAAGGAGAGACCAAGGAAAAAGAAGCAACCAAAGTGATTGATGAACAGCAGTACAA GGTTCATGATATAAACAAGACTTCTGAAACAGAGTTGATTGTGAATGAAAGTTGATCTGGTAAGGTCAAAGCCTTGAGAAAGGAATCTAATAAACTCTTG GCTTCTGTTCTCTTACTCTATCTGAGGATTACTGTAGTTTTTGTTAATGTGATTTATCTGCATGTTCGTTGAAGCAATTATAGACCACTATAGAGTAGCC CTATAATGTACCATACTTCTATGTATTGGATATGCATGTAGCTTCTGGTTCCCTTTGTAACGTTGTAAGGTGCTTGTAATGTGATTTGGACCTGTAATCT TGTAAAGGTCATGATCCTCTAAATACTCCATTTAGTCACATACTATTATATTTAGATCTTATTATCCGGTCAAAAA
• Tissue: pods
• Gene name: LI_gene_193170;
• Additional information: details;

Expression of Ll_transcript_348581

FPKM

• PAB: 0.5
• PNAB: 2.6
• PS1: 5.3
• PS2: 3.4
• PS3: 4.6
• PW1: 2.5
• PW2: 2.7
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_348581

• Blastp: Methyl-CpG-binding domain-containing protein 11 from Arabidopsis with 53.73% of identity
• Blastx: Methyl-CpG-binding domain-containing protein 11 from Arabidopsis with 64.79% of identity
• Eggnog: methyl-CpG binding(ENOG410YRVP)
• Kegg: Link to kegg annotations (AT3G15790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440338.1)
• Pfam: Methyl-CpG binding domain (PF01429.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;