Ll_transcript_349999

• Id Trinity: TRINITY_DN52492_c1_g1_i13
• Name Transcript: Ll_transcript_349999
• Sequence: TTAACAGTAGTGCTGCATGCAAAGCTGAATTATGTGCAAACCTCTTCAGCTTTGTCTGAACTTGGAGTTGAGTTGAAGAAGCAGAAGAGGGTCCTACTGC ATAATTTTTGGATAACAGGAAATCTTGGATCTAGTTCATATGAGGAGACCTTCAACACTTGTGAATCTGGTCCTGGTACTTGCATTGTTCAGTTGTAGTA TATGGACAGTGTGGAGCAGAAGCAGCTCACTTTGCAAACATACAAACTTTGAGGAAATTCGACGGCCGCATAGTGTCAGTATCAAAGAATTTGGAGCAAT AGGGGATGGAGTCACTCTCAACACAAAAGCATTTCAGAATGCCATCTTCTACTTAAACTCATTTGCAGATAAAGGAGGAGCAAAGCTTTTTGTCCCGGCT GGCCAGTGGCTGACAGGAAGTTTTGATCTCATCAGCCATCTAACTTTGTCATTGGATAAGGATGCAGTAATTCTCGGATCAACGAACACTGATGATTGGC CAATTGTGGATCCTCTACCATCGTATGGCCGAGGAAGGGAGTTGCCGGGTGGGAGGCATAAAAGCCTCATTTATGGGCAAAATTTAACTGATGTCATCAT AACTGGTAATAATGGCACTATAGATGGTCAAGGAAGTATCTGGTGGAGCAGGTTTCAGAACAAAACATTGAACTATACGCGCCCCCATTTGGTTGAGTTG ATAAATTCAACCGGAATTCGCATTGCAAACTTAACTTTCAAGAATTCACCATTTTGGACTATCCACCCTGTATATTGCAGCCATGTTACAGTTCAGAATG TCACAATCCTTGCTCCTCTCAGTTCACCGAACACAGACGGAATTGATCCAGACTCTTCAGACAATGTATGCATCGAAGACTGTTACATAAGCACTGGTGA TGATTTGATTTCCATCAAAAGTGGGTGGGACGAATATGGGATTTCATTCGGTCGTCCCAGTACGAACATTATTATTCACAGGCTCGTCGGGCAAACAACA AGTGCAGGGATTGCTATTGGAAGTGAGATGTCTGGAGGTGTATCTGATGTCCATGCAGAAGACATTCAGATTTTTAATTCACGTAGTGCAGTCAGAATAA AAACTTCTCCTGGCAGGGGCGGTTATATAAGAAACGTCTATATCGCTAACTTGACCTTGGCTAATGTAGATATTGCTATTAGGTTCAGCGGTTTATACGG AGAACATCCAGATGATGCTTATGACCCAGATGCTCTACCTTTAATAGAAAGGATTACTGTCACAGATGTGATTGGGGAAAATGTCAACCGCGCAGGCCTT TTACAGGGTATACAAGGTGATCATTTTATCAATATCTGCCTATTAAACATCACCCTTAGTGTGAGCAAAAAGGTTCCATGGAACTGCTCTTATGTTAAAG GTTACTCTGACTTGGTTTCTCCGAAAATTTGTGAGCCTCTGAAAGAGAGAATATTCCCGGAGCATTCTTCAGACTGTTACTATTTATCAAATCCCTTGAA GAGTTCGAGTAATCGTAATAAGGGTGGTTGGTTGATGTCTTGGTAAATTATGGAGTTTCAAGTATTCTGCTATATAGCTGAAATTTGATTGGTGCATCAC TTCAAGAGGACAAAATTTACCTGGCATAAGCAGCTGAGTAGTTTCTGATTTTAAATATGGGGATTTGTAGCTCTCTTACATTGTTCACAGACTTCTCTCT GTGTCTGTGACTTGGTCTTTAGCCCTCGTGTATTCTAACTTTTAAATGCATCTACTTGTGTGTTTCATTGAGTTTTCATTTATTTTCCATTGTATATGTG GGCAGATATAAAAAATAAGCGGGATTCCGCTGATTTATGTGATGGAATAGATCCTTCACAGCAAACTCTGCTCAAAACAAGTAAAATATCAGTTGTGTTG TTGCCTTGTTGACGTTTTCCCGTAACGGATGTAGACGTTAATCTCCAAGGTTTCATGTGTGCTGTATAGCAGTTTTATCAACATCTTTACTGCATCTTAG TATCATATAATGTTTCTGCTCCACTATGTTGGCGTATGGAATTTATTTCAAATTGCATATGGAATTTATGGATTGGAATAAATGTGCGTGTGTGCTGATT GGTGAATGCAACTTAATCACATATAGAATCATAAATGAAAGCATGGTTTTGTTATTTTGAAGTTCTTGTAATTTGTTTATTGCCTGAGTGTTGAAGTGTT TGCAGAATGTACTTTCTACTAGAAAAATCAACTCTCTTGTTATAGGCTGTAATTAT
• Tissue: pods
• Gene name: LI_gene_193184;
• Additional information: details;

Expression of Ll_transcript_349999

FPKM

• PAB: 1.5
• PNAB: 8.6
• PS1: 7.4
• PS2: 8.1
• PS3: 8.5
• PW1: 11.4
• PW2: 13.4
• PW3: 8.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349999

• Blastp: Probable polygalacturonase from Vitis with 52.88% of identity
• Blastx: Probable polygalacturonase from Vitis with 52.88% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427919.1)
• Pfam: Pectate lyase superfamily protein (PF12708.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;