Ll_transcript_350002

• Id Trinity: TRINITY_DN52492_c1_g1_i15
• Name Transcript: Ll_transcript_350002
• Sequence: ATAATAGTAAGAAATTGGTTAAGGATGAATGAAACATAACACAACACAAAAGAACAGAACACAAAAGGTTTGTCACGAGAAACGCAGATACGGTGAAAAT GTTGTTCTGTGAAGCATAAGCATGCAAAGCTAAATTCCATTTTAACCTCTTACCTTAACTTCTCTCTCTCAATTTCTCTTTGTCTCTTTCTCAATCTCTC TATCATTCTCATTCACCACTTTCACCAATACAATCGTTCATAACCACACAACCACAACCCGTGATCATTTCTTCATTGCTTCAAATTCATTGTCTTCCAC TTTCTTCATTCTCCATTTTCTCTCTCTGGGTACTTACTTCTATACAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGATATTGAAGAAGGGTGAAGGGGG GTCCTACTGCATAATTTTGGAGGAGGCATCAACAGTCTCTATCAATGATTTCGTTTTATTTTACTTAGTTACTATTACTCACCCATCTAATCACTATCAC TATCACACTTTGCACAATTAACTCTCTCTCTCTCTCTCTGGCTCTTATTCTTCACAAGGAGGATTTGGAATTAGTCATTGGTGGTGGCTCAAAAGCTCTG CTTTTTTTGGTCAGCTTCTTGGGCAAACCGGATCTCACTCTTATGAAGAGACCTTCAACTCTGGTGTATGTGATTCTTTTACTTGCATTGTTCAGTTGTA CCCCATGGATAGTGTGGAGCAGCTCACTCTGCCATGAAGCAAGCTCGGAGGTTGTTCGGCCTCACAGCGTCAGTATTACCGACTTTGGAGCAGTGGGCGA TGGGGTCACACTCAATACAAAAGCATTTCAGAATGCCATCTTCTACCTAAATTCATTTTCAGACAAAGGTGGAGCAAAGCTTTTTGTCCCGGCTGGCCAG TGGCTGACAGGAAGTTTTGATCTCATCAGCCATCTAACTTTGTCATTGGATAAGGATGCAGTAATTCTCGGATCAACGAACACTGATGATTGGCCAATTG TGGATCCTCTACCATCGTATGGCCGAGGAAGGGAGTTGCCGGGTGGGAGGCATAAAAGCCTCATTTATGGGCAAAATTTAACTGATGTCATCATAACTGG TAATAATGGCACTATAGATGGTCAAGGAAGTATCTGGTGGAGCAGGTTTCAGAACAAAACATTGAACTATACGCGCCCCCATTTGGTTGAGTTGATAAAT TCAACCGGAATTCGCATTGCAAACTTAACTTTCAAGAATTCACCATTTTGGACTATCCACCCTGTATATTGCAGCCATGTTACAGTTCAGAATGTCACAA TCCTTGCTCCTCTCAGTTCACCGAACACAGACGGAATTGATCCAGACTCTTCAGACAATGTATGCATCGAAGACTGTTACATAAGCACTGGTGATGATTT GATTTCCATCAAAAGTGGGTGGGACGAATATGGGATTTCATTCGGTCGTCCCAGTACGAACATTATTATTCACAGGCTCGTCGGGCAAACAACAAGTGCA GGGATTGCTATTGGAAGTGAGATGTCTGGAGGTGTATCTGATGTCCATGCAGAAGACATTCAGATTTTTAATTCACGTAGTGCAGTCAGAATAAAAACTT CTCCTGGCAGGGGCGGTTATATAAGAAACGTCTATATCGCTAACTTGACCTTGGCTAATGTAGATATTGCTATTAGGTTCAGCGGTTTATACGGAGAACA TCCAGATGATGCTTATGACCCAGATGCTCTACCTTTAATAGAAAGGATTACTGTCACAGATGTGATTGGGGAAAATGTCAACCGCGCAGGCCTTTTACAG GGTATACAAGGTGATCATTTTATCAATATCTGCCTATTAAACATCACCCTTAGTGTGAGCAAAAAGGTTCCATGGAACTGCTCTTATGTTAAAGGTTACT CTGACTTGGTTTCTCCGAAAATTTGTGAGCCTCTGAAAGAGAGAATATTCCCGGAGCATTCTTCAGACTGTTACTATTTATCAAATCCCTTGAAGAGTTC GAGTAATCGTAATAAGGGTGGTTGGTTGATGTCTTGGTAAATTATGGAGTTTCAAGTATTCTGCTATATAGCTGAAATTTGATTGGTGCATCACTTCAAG AGGACAAAATTTACCTGGCATAAGCAGCTGAGTAGTTTCTGATTTTAAATATGGGGATTTGTAGCTCTCTTACATTGTTCACAGACTTCTCTCTGTGTCT GTGACTTGGTCTTTAGCCCTCGTGTATTCTAACTTTTAAATGCATCTACTTGTGTGTTTCATTGAGTTTTCATTTATTTTCCATTGTATATGTGGGCAGA TATAAAAAATAAGCGGGATTCCGCTGATTTATGTGATGGAATAGATCCTTCACAGCAAACTCTGCTCAAAACAAGTAAAATATCAGTTGTGTTGTTGCCT TGTTGACGTTTTCCCGTAACGGATGTAGACGTTAATCTCCAAGGTTTCATGTGTGCTGTATAGCAGTTTTATCAACATCTTTACTGCATCTTAGTATCAT ATAATGTTTCTGCTCCACTATGTTGGCGTATGGAATTTATTTCAAATTGCATATGGAATTTATGGATTGGAATAAATGTGCGTGTGTGCTGATTGGTGAA TGCAACTTAATCACATATAGAATCATAAATGAAAGCATGGTTTTGTTATTTTGAAGTTCTTGTAATTTGTTTATTGCCTGAGTGTTGAAGTGTTTGCAGA ATGTACTTTCTACTAGAAAAATCAACTCTCTTGTTATAGGCTGTAATTAT
• Tissue: pods
• Gene name: LI_gene_193184;
• Additional information: details;

Expression of Ll_transcript_350002

FPKM

• PAB: 7.4
• PNAB: 35.3
• PS1: 31.2
• PS2: 16.6
• PS3: 29.8
• PW1: 25.2
• PW2: 25.3
• PW3: 12.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350002

• Blastp: Probable polygalacturonase from Vitis with 52.96% of identity
• Blastx: Probable polygalacturonase from Vitis with 52.96% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427919.1)
• Pfam: Pectate lyase superfamily protein (PF12708.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;