Ll_transcript_349985

• Id Trinity: TRINITY_DN52492_c1_g1_i4
• Name Transcript: Ll_transcript_349985
• Sequence: AAGGCCTCATAGTGTTAGTATCATAGAATTTGGTGCAGTTGGGGATGGAATTACTCTAAACACAAAAACATTTCAAAATGCCATCTTCTATTTAAACTCA TCTGCAGACAAAGGTGGAGGAAAGCTTTTTGTTCCAATCGGACGATGGCTAACTGGTAGTTTTGATCCCATCAGCCATCTAACTTTGTCATTTGGACAAG GATGAAGTAATTCTTGGATCAATAGTAAGACACTCTCCGTAATTTAGTTAGTAAGATTCAAGGCAAATGAAGTTTAGAAGGTTGCTTTCAGCATCATTTC CTGTCACAACCCAATTTTACATTTATGTTTAGTTCAGGTAGTTATTGGAGAAAGATATAATTTTCCTTAGATCAGATCAAGAACCATCCAATAATGTTCA CCTCATTGTAATTTGAGTTGCTTATTTTTCCACTAATTTTTAAGGAAGTGTGGAAATTTTTGTTGGTTTTGTACTCTTGGTTGTTCCTTTTTGTGATATT ATAGAACTCTTCTTGTAATTTCTAATTGAGTTGTGAAAATGTAGTTGATCTGAGTAGAATTTCAGCTTCTCAATTTGAAAATTTGAATTGGTTTATAGCC CTATATAGATCCTACTTGGGTTTCAAAG
• Tissue: pods
• Gene name: LI_gene_193184;
• Additional information: -

Expression of Ll_transcript_349985

FPKM

• PAB: 7.7
• PNAB: 4.1
• PS1: 2.4
• PS2: 4
• PS3: 4.8
• PW1: 3
• PW2: 3.8
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349985

• Blastp: -
• Blastx: Probable polygalacturonase from Vitis with 56.45% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440660.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;