Id Trinity | TRINITY_DN52496_c1_g1_i14 |
---|---|
Name Transcript | Ll_transcript_350500 |
Sequence | CACCATTTTCCTCTCCACATCATTAGAACATTACGTAACCGTAAGTTCCAAATTTCCTCTTCACAAATTTGCTTACTTATTCATACTCCCCTTCATTAAA TTTCACTTCATTTCATTTCCATCTTCTTCGTATTACTATAGGGTCTTTCATTTTTCACCATGTGCTATACCTGACACACCTTAACCCTATTATCCTCCCT CCTCTACTTTTTGCTTTCTCTTTTCTTCAACCCAAAACCTTCCTTTTCACTCCCATGGTTCCTCTCCATCATCAACCATGCCCAGCTTTTCCTCTCTCCC TGGGTCGATTAGTCGACGATTCTTTGGAAGGAATCTTGATAGCGCAGCCGGAAATGGCGGTGACAGCAGCAGCGACACTGTCGTCGTGCACGACGACAGC CCGACAATTGACACAGTGGAGTGTTACGCCTGCACGCAGTTAGGGGTGCCAGCGTTCCACTCCACCAGCTGTGATAGCTATCAACAGCCGCAATGGGAGG CATCTGCTGGCTCCTCTTTAGTCCCAATCCAGAACCAGCCCAAGGGCTCGACTGTCCGAGTCAGATCTCGGATCAACTCGGGCCCTTTCGGACTGGTTAT GGATCCAAGAACAAAACACGTGCAAGTGTGGAACCGCGGGCTACTTCTAGCGCGTGGGGTAGCACTTGCAATTGATCCACTCTTCTTCTACGCACTATCC ATTGGTAGGGAGGGAACGCCGTGCCTGTATATGGACGGGTGGCTTGCGGCAGTGGTGACGGTGGCGCGGTCATTTGTGGATGTGGTGCACTTGATCCACC TGTGGCTGCAATTCAAGATGGCGTATGTGTCGAGAGAATCGCTGGTTGTTGGGTGTGGGAAGCTTGTGTGGGATGCACGTGACATTGCAGCACATTATCT TCGATCTCTCAAGGGGTTCTGGTTCGATTTGTTTGTTATTCTTCCTGTGCCACAGACTGTATTCTGGTTGGTAGTACCAAAACTGATAAGGGAAGAGCAA CTTAAAATTATCATGACCATAATGCTCTTAATTTTTTTGTTCCAATTTCTCCCCAAGGTTTACCACTGTATCTGCATGATGAGAACAATGCAGAAGGTCA CAGGCTACATCTTTGGCACTATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTATTTCATTGCTTCTCATGTTGCCGGAGGGTGCTGGTATGTCCTTGC AATTCAACGCGTCGCGTCGTGCATTCGGCAGCAATGTGAAAGAACTCATGGATGCAATCTCTCTTTGTCTTGTTCTGAAGAGGTATGCTACCAATTTATG TCATCAGATGGAGCAGTAGGAACTCCATGTGGTGGAAACTCAACAATTGCTGCAAGAAAGCCTTTGTGCTTAAATGGTGAAGGACCTTTCAAATTTGGAA TTTACCAATGGGCACTTCCAGTTATATCCAGCAACTCCTTGGCTGTTAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCTTCGGTCCAAG AGTTATGTGTTCCAACAAATCTGGTATCAAGAGCAAGGTTTCAAGATCCAAGAACTCAATCGGTGCTCATCAAGATGGCACAGAATGGTGGCAATTTTCC AGCCAACCTTCCAGTGCTTGATGGAAAAAATTGGAACCGGTGGAGAGTGCAGATGAAGGCACTGATGGGTTACCAAGAAGTGGATGAAATAGTTGAGCAA GGCTTCCATGTCTTGCTGAAGATGCCACTGAAGAGCAGAAGAAGCTATACAAGGAAAACAAGAAAAAAGATTGCAAAGCTATGTTCCTCCTTCATCAGTG TGTAGACGGGGCACACTTTGAGAAGATCTCTAGGGCTGACAATTCGAAGGAAGCATGGCAGATTCTTGAAGCATGCAATCAAGGGGCAGAGCAATTAAAG AGAGTAAGGCTGCAAACTCTAAGGAGACAGTATGAGTTGATGCAGATAAATCCAAGTGAGAATGTGGCACAATTCTTCAATAGAATTGTCACTCATACAA ACTCAATGAAAGCATGTGGAGACAAGATCAATGATCTGTCCATTGTTGAGAAAATCCTCCGCACCCTAACACCAAACTTTGATCATATTGTGGTGGCAAT TGAAGAATCCAAGAGACTAGAAGAATTGAAGGTAGAAGATCTTCAGGGTTCTCTTGAGGCACATGAGCAGAGGCTCATGGAAAGATCAACTGAAAGACCA GGTGAGCAAGCCTTACAAGCTCACACAGGCAGAAGAAACTTTGGTGGAAGGAGTGTTTTTCGAGGAAGATGTAGGGGGGCGGAGATTTCAGAAATGAAAC ATTCAAGAAGGATCAATAAGGGAGTGATGCAGACAGATCAGAAGACTCTAGCAAGAGAGGAAGCTTTAATCAATGGAGAGGAGGGAGAAGAAAAGTAGTA GACAGGAGAAGGATCAAGTGTTACAATTGTGGAAAACTTGGTCACTTCTCATATGAGTGCAAGGCATCTCCTTATCAAGATGATGACAAAAGCTGGTCAA ATAAAGAAGCAAATATGGCTAAAGAAGAAGGTGAGACAGATAACAATGATCAACCCCTTCTGCTCATGATGGTCACAAACCAAGTCAGCAAGAACAATGA GAGCAATGATATGTGGTATATTGATTCTGGATGCTCAAGCCACATGACTGGTCATAGGGATTGGTTGGTGAATTTTGATGAAAGCAGAAGGAGCACCATC AGATTTGCTGATAATAGGGCCATCCAAGCTGAAAAGGATATTATAGGTGATGTGCCTGCATCAGGTGACATTTTGAGGAAGAATGATGGACTTGTACAAA ATGATGTATCTGTGGTTTCTAATTCCCCTGCAACATTTAAACACCCAACGCATTTGATAACTCCATCTGAGATATTCTCCAAATCTGCTCTATCTTCTGA GAACCCCCAAACATCTCAAGGTATGAATGTACAAGATGTGGCTGCTCATGGTGATGCAGAGAACTTTGAAGTAGAAGTTAAAGTTGTAGGTGAGACGGGT TCTAATCAAGAAAATACTGAGTATGACAGAGACAGGGACTCTCACACTGATGTTGCTGAGAAGAAAGAGAAGTTATTCTATTCTCAGGCCTCTGATCTGG GCATTCAGATGGCCAAAGAGGCCTATAATGCCGA BLAST |
Tissue | pods |
Gene name | LI_gene_193216; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350500
Blastp | Enhancer of mRNA-decapping protein 4 from Arabidopsis with 36.84% of identity |
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Blastx | Cyclic nucleotide-gated ion channel 2 from Arabidopsis with 75.89% of identity |
Eggnog | Enhancer of mRNA decapping 4(ENOG410XP6V) |
Kegg | Link to kegg annotations (AT3G13300) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461471.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |