Ll_transcript_350505

• Id Trinity: TRINITY_DN52496_c1_g1_i18
• Name Transcript: Ll_transcript_350505
• Sequence: CACCATTTTCCTCTCCACATCATTAGAACATTACGTAACCGTAAGTTCCAAATTTCCTCTTCACAAATTTGCTTACTTATTCATACTCCCCTTCATTAAA TTTCACTTCATTTCATTTCCATCTTCTTCGTATTACTATAGGGTCTTTCATTTTTCACCATGTGCTATACCTGACACACCTTAACCCTATTATCCTCCCT CCTCTACTTTTTGCTTTCTCTTTTCTTCAACCCAAAACCTTCCTTTTCACTCCCATGGTTCCTCTCCATCATCAACCATGCCCAGCTTTTCCTCTCTCCC TGGGTCGATTAGTCGACGATTCTTTGGAAGGAATCTTGATAGCGCAGCCGGAAATGGCGGTGACAGCAGCAGCGACACTGTCGTCGTGCACGACGACAGC CCGACAATTGACACAGTGGAGTGTTACGCCTGCACGCAGTTAGGGGTGCCAGCGTTCCACTCCACCAGCTGTGATAGCTATCAACAGCCGCAATGGGAGG CATCTGCTGGCTCCTCTTTAGTCCCAATCCAGAACCAGCCCAAGGGCTCGACTGTCCGAGTCAGATCTCGGATCAACTCGGGCCCTTTCGGACTGGTTAT GGATCCAAGAACAAAACACGTGCAAGTGTGGAACCGCGGGCTACTTCTAGCGCGTGGGGTAGCACTTGCAATTGATCCACTCTTCTTCTACGCACTATCC ATTGGTAGGGAGGGAACGCCGTGCCTGTATATGGACGGGTGGCTTGCGGCAGTGGTGACGGTGGCGCGGTCATTTGTGGATGTGGTGCACTTGATCCACC TGTGGCTGCAATTCAAGATGGCGTATGTGTCGAGAGAATCGCTGGTTGTTGGGTGTGGGAAGCTTGTGTGGGATGCACGTGACATTGCAGCACATTATCT TCGATCTCTCAAGGGGTTCTGGTTCGATTTGTTTGTTATTCTTCCTGTGCCACAGACTGTATTCTGGTTGGTAGTACCAAAACTGATAAGGGAAGAGCAA CTTAAAATTATCATGACCATAATGCTCTTAATTTTTTTGTTCCAATTTCTCCCCAAGGTTTACCACTGTATCTGCATGATGAGAACAATGCAGAAGGTCA CAGGCTACATCTTTGGCACTATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTATTTCATTGCTTCTCATGTTGCCGGAGGGTGCTGGTATGTCCTTGC AATTCAACGCGTCGCGTCGTGCATTCGGCAGCAATGTGAAAGAACTCATGGATGCAATCTCTCTTTGTCTTGTTCTGAAGAGGTATGCTACCAATTTATG TCATCAGATGGAGCAGTAGGAACTCCATGTGGTGGAAACTCAACAATTGCTGCAAGAAAGCCTTTGTGCTTAAATGGTGAAGGACCTTTCAAATTTGGAA TTTACCAATGGGCACTTCCAGTTATATCCAGCAACTCCTTGGCTGTTAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTTGGCAA TGATCTTGAACCCACAAGTGAATGGCTAGAAGTGATTTTCAGCATATGCACCGTACTCAGTGGACTACTGCTTTTCACTTTGTTGATCGGTAACATCCAG GTATTCTTACATGCAGTGATGGCAAAGAAGAGAAAGATGCAGCTGAGATGCCGCGACATGGAATGGTGGATGAAGAGAAGGCAGTTACCATCGCGATTAA AGAAAAGAGTTCGACATTTTGAACGTCAGAGATGGACAGCCATGGGAGGAGAAGATGAGATGGAATTGATCAAAGACTTGCCTGAGGGACTCAGAAGGGA CATCAAGCGTTATCTCTGTCTTGACCTCATTAAAAAGGTCCCACTGTTTCACAATTTGGATGATCTCATTCTTGACAACATATGTGATCGAGTTAAGCCC AGAGTCTTATCAAAAGATGAAAAGGTACTTAACAATATAAACAATTATCACATGAGACCCACCAATTTTTTCTCATGAAATCCTTATAATAAAAAACAAC CACAATCTTATGAGTTTATGACACAGATAATCAGAGAAGGTGACCCAGTACCAAGAATGGTATTCATTGTTCGTGGCCGCATAAAGCGCAACCAAAGCCT CAGCAAAGGTATTGTTGATTAGCATGACTCAGAAACTGTTATGATTCATTAGGTAATAAAGAGTCAATATGTCTATTAGGAATGTTTCACTTTCTATGTT GTTGGAGCACGTACTTGACTCACTATACTATTCATGTAGGAATTTATTTTTTTTCTACTATTTCATATACTAAATTTCCTCGCTATACTTCTGCTTGCTA CATAACCAATAGGTATCGTAGCCTCGAGTATCTTAGAACCCGGAGGGTTCTTAGGTGATGAGTTACTTTCATGGTGTCTTCGCCGCCCTTTTCTAGAAAG ACTCCCAGCTTCCTCAGCCACATTTACATGTCTTGAATCAGCTGAAGCGTTTGTTCTTGATGCTGAACATTTGAAATACATCACTGATCATTTTCGGTAC AAATTTGCAAATGAAAGATTAAAGAGAACAGCAAGATATTACTCATCAAATTGGAGAACATGGGCTTCTGTGAATATTCAAATTGCTTGGAGACGTTACA GGGATAGGACTAGAGGACCAGTGACCCCTGTAAGGGATAATAATGAAGGAAGCACTGAACGAAGGCTCTTGCAATATGCTGCAATGTTTATGTCAATTAA GCCTCATGATCATCTTGAATGAAAAGTGATAGTGGTGTGTGATTGTTTTAGTTTTGTTTAATTCATCATTAGACTTTTGAAGTTTGCATCGGAGTGAAGT TATGGTATTATTGGTGAAATGTAAAGGAGAATAAAACTGGAAAAAGAGCAATAGCTATTGAATAAACATTTGTATTTATGCATGCATTTCATTCCTGTCT CTAACCTATTTCATAGGAAAGCATGGAAAAGATAAGCCACACATGCAGTCAAATATGTTATTTATGAGTTGGGCTCCGAAGTAATGGAGAGACAAGTGAT TTTTTCCTTTGTCTTTTAAGGGTAAAAGTGTAATATTATTTTAAATATAATGGATATAAATGTATGCATATTACTTTTTCTTTAAAAAA
• Tissue: pods
• Gene name: LI_gene_193216;
• Additional information: details;

Expression of Ll_transcript_350505

FPKM

• PAB: 2
• PNAB: 0.3
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350505

• Blastp: Cyclic nucleotide-gated ion channel 2 from Arabidopsis with 77.91% of identity
• Blastx: Cyclic nucleotide-gated ion channel 2 from Arabidopsis with 74.04% of identity
• Eggnog: Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE)
• Kegg: Link to kegg annotations (AT5G15410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461471.1)
• Pfam: Ion transport protein (PF00520.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;