| Id Trinity | TRINITY_DN52496_c1_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_350506 |
| Sequence | CACCATTTTCCTCTCCACATCATTAGAACATTACGTAACCGTAAGTTCCAAATTTCCTCTTCACAAATTTGCTTACTTATTCATACTCCCCTTCATTAAA TTTCACTTCATTTCATTTCCATCTTCTTCGTATTACTATAGGGTCTTTCATTTTTCACCATGTGCTATACCTGACACACCTTAACCCTATTATCCTCCCT CCTCTACTTTTTGCTTTCTCTTTTCTTCAACCCAAAACCTTCCTTTTCACTCCCATGGTTCCTCTCCATCATCAACCATGCCCAGCTTTTCCTCTCTCCC TGGGTCGATTAGTCGACGATTCTTTGGAAGGAATCTTGATAGCGCAGCCGGAAATGGCGGTGACAGCAGCAGCGACACTGTCGTCGTGCACGACGACAGC CCGACAATTGACACAGTGGAGTGTTACGCCTGCACGCAGTTAGGGGTGCCAGCGTTCCACTCCACCAGCTGTGATAGCTATCAACAGCCGCAATGGGAGG CATCTGCTGGCTCCTCTTTAGTCCCAATCCAGAACCAGCCCAAGGGCTCGACTGTCCGAGTCAGATCTCGGATCAACTCGGGCCCTTTCGGACTGGTTAT GGATCCAAGAACAAAACACGTGCAAGTGTGGAACCGCGGGCTACTTCTAGCGCGTGGGGTAGCACTTGCAATTGATCCACTCTTCTTCTACGCACTATCC ATTGGTAGGGAGGGAACGCCGTGCCTGTATATGGACGGGTGGCTTGCGGCAGTGGTGACGGTGGCGCGGTCATTTGTGGATGTGGTGCACTTGATCCACC TGTGGCTGCAATTCAAGATGGCGTATGTGTCGAGAGAATCGCTGGTTGTTGGGTGTGGGAAGCTTGTGTGGGATGCACGTGACATTGCAGCACATTATCT TCGATCTCTCAAGGGGTTCTGGTTCGATTTGTTTGTTATTCTTCCTGTGCCACAGACTGTATTCTGGTTGGTAGTACCAAAACTGATAAGGGAAGAGCAA CTTAAAATTATCATGACCATAATGCTCTTAATTTTTTTGTTCCAATTTCTCCCCAAGGTTTACCACTGTATCTGCATGATGAGAACAATGCAGAAGGTCA CAGGCTACATCTTTGGCACTATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTATTTCATTGCTTCTCATGTTGCCGGAGGGTGCTGGTATGTCCTTGC AATTCAACGCGTCGCGTCGTGCATTCGGCAGCAATGTGAAAGAACTCATGGATGCAATCTCTCTTTGTCTTGTTCTGAAGAGGTATGCTACCAATTTATG TCATCAGATGGAGCAGTAGGAACTCCATGTGGTGGAAACTCAACAATTGCTGCAAGAAAGCCTTTGTGCTTAAATGGTGAAGGACCTTTCAAATTTGGAA TTTACCAATGGGCACTTCCAGTTATATCCAGCAACTCCTTGGCTGTTAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTTGGCAA TGATCTTGAACCCACAAGTGAATGGCTAGAAGTGATTTTCAGCATATGCACCGTACTCAGTGGACTACTGCTTTTCACTTTGTTGATCGGTAACATCCAG GTATTCTTACATGCAGTGATGGCAAAGAAGAGAAAGATGCAGCTGAGATGCCGCGACATGGAATGGTGGATGAAGAGAAGGCAGTTACCATCGCGATTAA AGAAAAGAGTTCGACATTTTGAACGTCAGAGATGGACAGCCATGGGAGGAGAAGATGAGATGGAATTGATCAAAGACTTGCCTGAGGGACTCAGAAGGGA CATCAAGCGTTATCTCTGTCTTGACCTCATTAAAAAGGTAACAAATCTACGACCAAATAAGTTGAATAATAAAGAAATGTTTGAGAGACTTAATTTAGAG GAGGAATCGTCTCGCTTATTTGAGAGTTGGATAGAAGAAATGTTTTGAAGATTACGTCAAGTCTTCTAAAATACTCTATAAATCTATTTTCATGTTTTCT GAAAACAAACACATCATATTATCTGAATGCTCCTACTAAGATTTTGTAAGTATATTTTTATTCATTTTTTATTGTTAATTATATTTTTAAGATTTCTAAG GGGGTAAAACAATGTTCGTCCATGTGATTTACCTTTGTTAACACATTATTCTTCTCTCGTCTAAATAAGAGAGGTGACATACAATATAAAATATCTTAAG TTGGATTGTTTGTTAGATTTGGAGGATATAATTATTTATGGACACCTAATATTTAAGGTTTCTTAGGAACACTTAAAATAGTAATATGCTTTTATGTTAT GATATCTTTGATCATTCAAGGTAAGATATAAACTTGTTTAAAGATTCACAGTAATTCACCACTCTCACTGTTATATGTCCACGCAATTTTTGGGTTTTTT ATATGTTAAGAAATTAATATATAAAATATTTTAAAACAATTAATAAACTTTACCATATGAAATTTTTTTGGATGTCTGACTTCATATCCTTGAAAGTGCA TTTTGCCCCTCTATGAAAATGCATTGAATTATAGGGTATTTTATATTGTTAACATATATATTATTTATCATTTTTATAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_193216; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350506
| Blastp | Cyclic nucleotide-gated ion channel 2 from Arabidopsis with 77.87% of identity |
|---|---|
| Blastx | Cyclic nucleotide-gated ion channel 2 from Arabidopsis with 78.19% of identity |
| Eggnog | Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE) |
| Kegg | Link to kegg annotations (AT5G15410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461471.1) |
| Pfam | Ion transport protein (PF00520.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |