Ll_transcript_348355

• Id Trinity: TRINITY_DN52498_c3_g2_i1
• Name Transcript: Ll_transcript_348355
• Sequence: CTCAATCATCTTCACTCGACAAGGTTTGATACTCATTTTCTCATAGTGACAATCTATGAAACACATCTCTATATATTAGTGCAACATGGAGCATCAAGAA TGTCGAATTCCATCTAGTTTTGCAATCAAGTTCTAACTTACTTGTCCATAAGCCGGATAATATCCTTAGTCATAATCCCAACGAAAAAAATATGGAAGGA CATTTAAGTAATTTAACACTGTCCTTTGCTCCCCCATAACACGTTCATATCGTAAACACTCCATTTTCCATTTTCTGTTTCCCATTTTGAATTTCTTCTA TTTGGGTCTGAACAAATTCTATTTCTTGTCTTCGTTTTTTCTTTTCTTCATCGGTGTTACCAATTTAAGTTGCTTGACATGGCTACCCATACCCCAAAAA ATATCCTCATTACTGGGGCAGCTGGATTTATTGCATCTCATGTTGCAAACCGCCTTGTCCGGAGCTACCCGGACTACAAAATTGTTGTCCTTGACAAACT TGATTACTGCTCAAATCTGAAGAATCTCATTCCTTCAAAATCATCACCCAACTTCAAGTTTGTGAAGGGAGATATCGGTAGTGCTGATCTTGTCAACTAC CTTCTCATCACTGAGTCGATCGACACTATAATGCACTTTGCTGCTCAAACCCATGTTGACAACTCGTTCGGTAATAGCTTTGAGTTCACCAAGAATAACA TATATGGTACTCATGTCCTATTAGAAGCTTGCAAGGTAACTGGTCAGATCAGGAGGTTCATTCATGTGAGCACTGATGAGGTCTATGGGGAAACCGATGA GGATGCTGTTGTCGGAAACCATGAAGCTTCTCAACTTCTTCCCACAAACCCATACTCTGCAACAAAAGCTGGGGCTGAAATGCTTGTCATGGCATATGGT AGGTCTTATGGGTTACCTGTGATTACGACACGTGGAAACAATGTCTATGGGCCTAATCAGTTTCCCGAGAAGTTAATTCCAAAGTTCATCCTCCTAGCTC TGCAAGGCAAGCCTCTTCCAATTCATGGGGATGGTTCTAATGTGAGAAGTTATTTATATTGTGAAGATGTTGCTGAGGCTTTTGAAGTCATCCTTCACAA GGGAGAGGTTGGGCATGTTTACAATATCGGAACCAAGAAGGAAAGGAGAGTTATTGATGTAGCCCAAGATATATGCCGACTTTTCTCGATGGACCCAGAC GCTAGTATAAAGTTCGTAGAGAACAGACCATTTAATGACCAGAGATACTTCCTTGATGATGAAAAGCTAAAGATCTTGGGCTGGTCTGAGAGGACCACTT GGGAAGAGGGGTTGAAGAAAACCTTAGACTGGTATACCAAGAATCCAGATTGGTGGGGTGATGTTACTGGTGCATTGCTTCCTCATCCAAGGATGCTGAT GATGCCTGGTGGGCTAGAGAGGCATCTCGATGGATCTGAAGACGAAAAACCCGAGTCATATGTCTCAACTAATACTCGAATGGTGGTTCCACCATCCAAG AGTGTTGGGACCTCACAGAAACATCCTATCAAGTTCTTGATCTATGGTAGAACAGGATGGATTGGAGGCTTGCTGGGGAAATTGTGTGAAAAGCAAGGGA TTCCGTATGAATATGGAAAAGGACGCTTGGAGGATCGCGCATCACTTGTGGCTGACATTCAAAGTGTGAAACCAACACATATTTTTAATGCTGCTGGAGT GACTGGCAGACCCAATGTTGATTGGTGTGAAACTCATAAAACAGAAACCATCCGTGCCAATGTTGCTGGGACTTTAACATTGGCTGATGTGAGCAGAGAG CATGGGCTCTTGGTGATAAATTACGCAACTGGATGCATATTTGAGTATGATGCAGCTCATCCAGAGGGTTCTGGCATTGGTTTTAAGGAGGAAGACAAAC CCAACTTCATGGGTTCTTTCTATTCCAAGACGAAGGCCATGGTTGAGGAGCTATTGAGAGAATATGACAATGTATGCACCCTCAGGGTTCGCATGCCAAT TTCATCAGATCTGAGCAATCCACGCAATTTCATTACCAAGATTTCTCGCTATAACAAAGTAGTTAACATTCCAAACAGCATGACTATTTTGGACGAACTT CTTCCAATTTCAATCGAGATGGCAAAGAGGAACCTGAGGGGCATATGGAACTTCACAAATCCGGGGGCTGTTAGCCATAATGAGATTCTTGAGATGTACA GAGATTACATTGATCCCAGCTTCAAGTGGAATAACTTCACACTCGAAGAGCAAGCCAAGGTAATAGTTGCAGCAAGAAGCAACAATGAGATGGATGCCTC CAAATTGAAGAATGAGTTTCCGGAGTTACTTTCCATCAAGGAATCTCTGGCCAAGTTTGTCTTTGAGCCAAACAAGAAAACTACTTAAAAATATTAAGGC ACTTACATTCTTAAGAGACATCAGTTATTCTCTGCATTTTTGTGTCTGGCTACACAGATCACTGGTTGTTTAATTAGTAGCTCCATCTAGTTATTTTAAA GGGTGACAAGTATTATCATTGATGTTAGGTTTGGTTCCTAAATTTTCATTGCTACAGCTTTATTATAGTTTACTAGTGTGTGCTCTTTTAAGCTTGTAGT GAGCAACTTTTGCATCCTGCAAGACATTTATTCTTTTATGGTTTATATATATCCCTTTTGTGGGTTATGCTTGTTTTGTATTTGCATTTCTATATGCAAT TGAAAGCATGCTACGGATATATTCATTATATTTCATCCAGTTAAAGAAGTTAGTGTGATGTAAACACTTGAAGTTGTGTGCAAAATACAGATATGATAAC AGTGGGGTTTTTGGTCCTTGATAAAAATCTAAACTAGCTTCATGTTTATTGCAGTCTTCTTCTGTATGCCCAATTTGGGTGTCAATGGTGTGAAATATTC AAGTGAGGCTTGAAAGAAAAAATACAAACTTGAACTTGCTTTCAATACAAACTTTGTGGGAGCACCTC
• Tissue: pods
• Gene name: LI_gene_193233;
• Additional information: details;

Expression of Ll_transcript_348355

FPKM

• PAB: 9.6
• PNAB: 57.2
• PS1: 19.1
• PS2: 11.4
• PS3: 17.4
• PW1: 23.5
• PW2: 23.3
• PW3: 14.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_348355

• Blastp: Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 from Arabidopsis with 87.48% of identity
• Blastx: Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 from Arabidopsis with 87.43% of identity
• Eggnog: dTDP-glucose 4-6-dehydratase(COG1088)
• Kegg: Link to kegg annotations (AT1G78570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443848.1)
• Pfam: RmlD substrate binding domain (PF04321.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;