Ll_transcript_350807

• Id Trinity: TRINITY_DN52499_c0_g1_i3
• Name Transcript: Ll_transcript_350807
• Sequence: CACATACTTGATTTTTTCTTTCGTTCTCTTCTTTTGTTTTGCCTGCCTATGTGGGGAGGTAGAAGCGTAGAGAGCGAAGAAATAAAAGAAAAAAATATAA AAAAAACAATAAGGAAGAATCAAATATATCACTTTTGATAGTTTCTTCCTTATAATATGGCTTCTGATATTTCGTTTGAGGATCTCAAGAATGAGAATGT TGATCTAGAAAATATTCCAATTGAGGAGGTCTTTCAGCAGCTAAAATGTACCAAAGAGGGTTTGTCATCCGAGGAAGGACAGAAGAGGCTCCAGATTTTT GGCGCCAACAAGCTAGAGGAGAAATCAGAGAGCAAGTTTCTCAAGTTCTTGGGTTTTATGTGGAATCCTCTCTCTTGGGTCATGGAAGCAGCAGCTATCA TGGCCATTGTATTGGCCAATGGAGGGGGCAAACCTCCGGATTGGCAAGATTTCACTGGTATTGTGGTTCTGCTTATTATTAACTCAACAATTAGTTTTAT TGAGGAAAATAATGCAGGCAATGCCGCAGCTGCTTTGATGGCTGGTCTTGCACCCAAAACCAAGGTTTTGAGAGATGGAAAATGGGGTGAAGAAGAGGCT GCTATTTTGGTACCAGGAGATCTGATCAGCATCAAGTTGGGAGATATTGTCCCAGCTGATGCCCGTCTCTTAGAGGGAGATCCTTTAAAGATTGATCAAT CTGCCCTCACTGGTGAATCCTTACCAGTCACAAGGTACCCTGGTCAGCAGGTCTTCTCTGGTTCCACCTGCAAACAAGGTGAAATTGAGGCTGTTGTCAT TGCCACTGGTGTCCACACCTTCTTTGGCAAGGCTGCACACCTTGTAGACAGCACAAACAATGTTGGTCACTTCCAAAAGGTGTTGACATCCATTGGTAAC TTCTGTATCTGTTCAATCGCTATTGGAATGATAGTGGAAATCATTGTCATGTACCCCATCCAACACAGGTCTTATAGAGATGGTATTGACAATTTGTTGG TGCTTCTCATTGGAGGTATCCCGATTGCGATGCCAACAGTGTTGTCCGTAACAATGGCTATTGGCTCTCATAGGCTGTCCCAGCAGGGTGCTATCACCAA GAGGATGACAGCTATTGAGGAAATGGCTGGTATGGATGTTTTATGTAGTGACAAGACTGGAACTCTAACACTGAACAAGCTCACTGTGGATAAGAATTTG GTTGAGGTTTTCTCAAAAGACACTGACAAGGACACTGTAATTTTGCTTGGAGCTAGGGCTTCTAGAGTAGAGAACCAAGATGCTATTGATGCTTGTATTG TTGGAATGTTGGGTGACCCTAAGGAGGCTAGAGATGGCATTACTGAAGTGCATTTCTTGCCCTTTAATCCGGTGGACAAGCGTACCGCCATAACATACAT CGACTCTAAGGGCAATTGGCATAGAGTAAGCAAGGGAGCACCAGAGCAGATTATAGAACTTTGCAATCTCAGGCCTGATGTGAAGAAGAGAGCTCATTCC ATCATTGACAAATTTGCTGACAGGGGTCTCCGTTCCCTAGCTGTTTCAAAACAAGAAGTTCCAGAGAAGAGCAAGGAGAGTCCAGGAGGACCATGGGACT TTGTAGGACTCTTGCCTCTCTTTGATCCACCTAGGCATGACAGTGCAGAGACTATTCGCCGTGCTCTTCATCTTGGAGTGAATGTTAAGATGATAACAGG TGATCAGCTAGCTATTGGTAAGGAGACCGGTCGCAGGCTTGGCATGGGAAGTAATATGTACCCTTCTTCTTCTCTCCTTGGTGAGCACAAGGATGAGTCT ATTTCTGGGCTTCCAATTGATGAGCTTATTGAGAAGGCTGATGGTTTTGCCGGTGTCTTTCCTGAACACAAATATGAGATTGTGAAGAGACTTCAAGATA GAAAACACATATGCGGTATGACTGGAGATGGTGTCAATGATGCTCCAGCCCTGAAAAGGGCAGATATTGGAATTGCAGTGGCTGATGCAACTGATGCAGC TCGTGGTGCATCCGACATAGTCCTGACTGAACCTGGTTTGAGTGTGATTATCAGTGCAGTTTTGACAAGTAGATCAATTTTCCAAAGAATGAAGAACTAC ACCATTTATGCTGTTTCCATCACAATCCGAATTGTGCTCGGCTTTATGCTGCTAGCTCTTATATGGAAATTTGATTTCTCACCTTTTATGGTTTTGATCA TTGCCATTCTAAACGATGGGACAATTATGACCATTTCCAAGGATAGGGTGAAGCCATCTCCCTTGCCCGATTCATGGAAACTGAATGAGATTTTTGCTAC AGGAATAGTGCTTGGTACCTATCTTGCTATCATGACTGTTGTCTTCTTCTGGCTTATTTATGGAACTGATTTCTTCTCGGAGAGATTTGGGGTCAGATCT ATCAGGGCCGATAATGATCAGCTCACAGCAGCTGTTTACCTTCAAGTCAGTATTGTTAGTCAGGCACTCATCTTTGTTACTCGATCAAGAAGCTGGTCTT TCGTCGAACGCCCGGGTCTCTTGCTTGTTATAGCCTTTGCCATAGCACAATTGGTTGCTACACTCATAGCTGTCTATGCAGACTGGAGCTTTGCAAAGAT GAAAGGAATTGGTTGGGGTTGGGCTGGTATCATTTGGCTCTACAGCATTATTTTCTACTTCCCCTTGGATGTTCTTAAATTCATCATCAGATATGTATTG AGTGGAAAGGGATGGAGTAACATCACTGAGAACAAGATTGCTTTTACAACAAAGAAGGATTATGGAAAAGAAGAAAGAGAAGCACAATGGGCTACCGCTC AACGTACGCTACATGGACTAAATCCTCCCGGAACAGAACAGATACTGCAGGAACACAATACCTTCAGCGAGTTGTCTGAAATAGCGGAACAAGCTAGGAA ACGTGCTGAAGTTGCAAGGCTGAGGGAGCTTCACACATTGAAGGGACATGTTGAATCTGTTGTGAAGCTAAAGGGACTTGACATTGACACAATTCAGCAA CATTACACTGTCTGAGTGAAGCAACTACTATTGCAATTTATAACATGAGAGTAGTAAATTGGAAGGTTTTCATTATCTTAAAACTCATTTGTATTTACAA GATGCAAGGGCTTTGAAATAATCCTGTGATTGTGCAAAGACAATCCAAGTTTGGGGCACATACCAAATGGTTATGTGTATGGAATGTTCTTTGACTTCAT ATTTTAATGTTGTTTAGAATTCCAACAAGTATTGAAAGTGAGAATAACATATTATTTTCTTTTTACCTTGAATGGAATTTACTTTTCTATTCTTTCACTC ATATGATTGTTGATTTTTTATAGTCTTATGGTGTTCAAATAAGATAATGTTTTG
• Tissue: pods
• Gene name: LI_gene_193243;
• Additional information: details;

Expression of Ll_transcript_350807

FPKM

• PAB: 0.3
• PNAB: 1.9
• PS1: 17.6
• PS2: 13.3
• PS3: 23.3
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350807

• Blastp: ATPase 8, plasma membrane-type from Arabidopsis with 84.45% of identity
• Blastx: ATPase 8, plasma membrane-type from Arabidopsis with 84.45% of identity
• Eggnog: P-type atpase(COG0474)
• Kegg: Link to kegg annotations (AT3G42640)
• CantataDB: Link to cantataDB annotations (CNT0001630)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427171.1)
• Pfam: Cation transporter/ATPase, N-terminus (PF00690.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;