| Id Trinity | TRINITY_DN52499_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_350810 |
| Sequence | GGTTCTCATCGGTTGTCACAGCAAGGTGCTATCACTAAGAGGATGACAGCTATTGAGGAAATGGCTGGTATGGATGTTTTATGTAGTGACAAGACTGGTA CTCTAACACTTAACAAGCTCACTGTGGACAAGACTTTGGTTGAGGTTTTTACAAAAGATACTGATAAGGACACTGTGATTTTGCTCGGAGCTAGGGCTTC TAGGGTAGAGAACCAAGATGCTATTGATGCTTGCATTGTTGGAATGTTGGGTGATCCAAAAGAGGCCAGAGATGGCATTACAGAGGTACATTTCCTGCCG TTTAATCCGGTGGACAAGCGTACGGCCATTACATACATAGACACTGCAGGTAATTGGCATCGAGCTAGCAAAGGAGCACCAGAGCAGATTATAGAACTTT GCAATCTCAGGGAAGAGGTGAAGAGGAAAGCTCTTTCCATTATTGATAAATTTGCTGAACGCGGTCTTCGTTCCCTTGCTGTTGCCAAACAAGAAGTGCC AGAAAAGAGCAAGGAGAGTGCAGGAGCACCATGGCAATTTGTTGGTCTGTTGCCTCTCTTCGATCCACCGAGGCATGACAGTGCAGAGACCATTAGGCGC GCTCTCCATCTCGGAGTGAATGTTAAGATGATCACTGGTGATCAGCTAGCTATTGGAAAGGAAACTGGTAGAAGGCTTGGCATGGGAAGTAACATGTATC CGTCTTCCTCTCTCCTTGGTGAGGACAAGGATTCGACTATTTCCGGTCTTCCAATTGATGAACTTATTGAGAAGGCTGATGGATTTGCTGGAGTCTTCCC TGAACACAAATATGAGATTGTGAAGAGGCTCCAAGATAGAAAACACATATGCGGTATGACAGGTGATGGTGTCAATGATGCTCCAGCCCTGAAAAGGGCA GATATTGGAATTGCAGTGGCTGATGCAACTGATGCAGCTCGTGGCGCATCTGACATAGTCCTGACTGAGCCTGGTTTGAGTGTGATTATAAGTGCAGTCT TGACAAGCAGGACAATTTTCCAAAGAATGAAAAACTACACCATTTACGCTGTTTCCATAACAATCCGTATTGTGCTAGGCTTTTTGTTGCTAGCTCTTAT CTGGAAATTCGACTTCTCGCCATTTATGATTTTGATCATTGCCATACTAAATGATGGAACGATTATGACCATTTCCAAGGATAGGGTAAAGCCATCTCCT TTGCCAGATTCATGGAAACTGAATGAGATTTTCGCCACTGGCATAGTGCTAGGCACCTACCTTGCTATCATGACCGTTGTCTTCTTCTGGGCTGCTCATG CAACAGATTTCTTCTCAGAAAAATTCGGCGTTCACTCTATTAGGGAAAATGAAGATGAGCTCACAGCAGCTATTTACCTTCAAGTGAGTATTGTAAGCCA GGCTCTCATCTTTGTTACTCGGTCAAGAAGCTGGTCTTTCCTCGAACGCCCCGGACTCTTACTTGTTATAGCCTTTATCATAGCACAACTAGTTGCCACA TTAATAGCTGTCTATGCCGACTGGGGCTTTGCAAAGATGAAGGGAATCGGTTGGGGTTGGGCCGGTGTTATTTGGCTCTACAGCATCATTTTCTACTTTC CCTTGGATGTTATTAAATTTATCATCAGATATGTATTGAGTGGCAAGGCATGGAAGGGTATTACTGAGAATAAGACTGCTTTTACATCGAAGAAGGATTA CGGAAAGGAAGAGCGAGAAGCACAATGGGCTACAGCGCAACGCACATTGCATGGACTAAACCCTCCCACAACAAAACAAATATTGGATGAACACACTAGC TATAGTGAATTGTCCGAAATTGCAGAACAAGCCAAAAAACGCGCTGAAATTGCAAGGCTGAGGGAGCTCCACACACTAAAGGGTCATGTTGAATCAGTAG TGAAGCTAAAGGGACTTGACATTGACACAATTCAGCAGCATTACACAGTTTGAGTAAAAAGCAAAGTTCTATTTGAATGTAGTGTAATAATAAGAGCATG AAAATACTATGGTTGTGTTAGTTTTTTAGTATCTTAAACTTGAATTTGTATTAGGAAGATGCATGGGCTTTAAAATAATTCTGTACTTTGAGATTGTGCA TAAACAATCCAAGTTTGATTGGACATAACAAATTATTATGCTTATGAAATATTATTGTACTTTTATATTTAATTCCTATATGTAAGTATCCAAAGTGGTA CTGCAATGTTATAATAAAGTAAAGTGAAATCAATGAACATTTATATGTATAATCAATGGTGATATTTATTTTGGTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_193243; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350810
| Blastp | Plasma membrane ATPase from Oryza sativa with 84.05% of identity |
|---|---|
| Blastx | Plasma membrane ATPase from Oryza sativa with 84.05% of identity |
| Eggnog | P-type atpase(COG0474) |
| Kegg | Link to kegg annotations (4337257) |
| CantataDB | Link to cantataDB annotations (CNT0001630) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443343.1) |
| Pfam | haloacid dehalogenase-like hydrolase (PF00702.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |