Id Trinity | TRINITY_DN52499_c0_g1_i7 |
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Name Transcript | Ll_transcript_350812 |
Sequence | AAGGAAAACTAGACTTGTGCTTTGTCTCATCTTTTTGTTGAGATAGAGATATCAAAACATTTGTTTTGTTGGGTTTCTTCCTCCTCTTCTTTTGTTCTAC CTGCCTATAGTGGGAGGTAGAAACATAGAGAGCCTAGAAACAATAGGAATAAAGGAAGAACCAAATAGCTCACCTCTGATACCTTTTTTATTATATTATG GCTTCTGATATTTCGTTTGAGGATCTCAAAAATGAGAATGTTGATCTTGAAAACATTCCAATTGAGGAGGTATTTCAGCATCTAAAATGTAGTAAAGAGG GTCTGTCATCAGAAGAAGGACAAAAGAGGCTTGTGGTTTTTGGCCCCAACAAACTAGAGGAGATAACAGAGAGTAAGTTTCTCAAGTTCTTGGGTTTTAT GTGGAATCCACTATCATGGGTTATGGAAGCAGCTGCTATCATGGCAATTGTGTTAGCCAATGGAGGGGGAAAGCCACCGGATTGGCAAGATTTTACTGGT ATTGTGGTATTGCTTATCATCAATTCAACCATTAGTTTCATTGAGGAAAACAATGCAGGCAATGCTGCAGCTGCTTTGATGGCTGGTCTTGCTCCTAAAA CCAAGGTTCTGAGAGATGCGAAATGGGGTGAAGAAGATGCGGCTATTTTGGTACCGGGAGATCTGATTAGCATCAAGTTGGGAGATATTGTCCCAGCCGA TGCTCGTCTCTTGGAGGGAGATCCTTTAAAGATCGACCAATCTGCCCTAACTGGCGAGTCCTTGCCGGTCACAAGGAACCCTGGTGATCAGGTCTTCTCT GGATCTACATGCAAACAAGGTGAAATTGAGGCTATTGTCATTGCCACGGGTGTCCACACCTTCTTCGGTAAGGCTGCACACCTTGTAGACAGCACAAACA ATGTTGGTCACTTCCAAAAGGTGTTGACATCTATTGGTAACTTTTGTATATGCTCAATTGCTATCGGAATGTTGGTTGAGATTATCGTCATGTACCCGAT CCAGCAAAGGTCATATAGAGATGGTATTGACAATTTGTTGGTGCTTCTCATTGGAGGTAT BLAST |
Tissue | pods |
Gene name | LI_gene_193243; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_350812
Blastp | ATPase 6, plasma membrane-type from Arabidopsis with 86.06% of identity |
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Blastx | ATPase 6, plasma membrane-type from Arabidopsis with 86.06% of identity |
Eggnog | P-type atpase(COG0474) |
Kegg | Link to kegg annotations (AT2G07560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417373.1) |
Pfam | Cation transporter/ATPase, N-terminus (PF00690.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |