Ll_transcript_350816

• Id Trinity: TRINITY_DN52499_c0_g1_i9
• Name Transcript: Ll_transcript_350816
• Sequence: GGTTCTCATCGGTTGTCACAGCAAGGTGCTATCACTAAGAGGATGACAGCTATTGAGGAAATGGCTGGTATGGATGTTTTATGTAGTGACAAGACTGGTA CTCTAACACTTAACAAGCTCACTGTGGACAAGACTTTGGTTGAGGTTTTTACAAAAGATACTGATAAGGACACTGTGATTTTGCTCGGAGCTAGGGCTTC TAGGGTAGAGAACCAAGATGCTATTGATGCTTGCATTGTTGGAATGTTGGGTGACCCAAAGGAGGCCAGAGAAGGCATTAGAGAGGTGCATTTCCTACCC TTTAATCCAGTAGACAAGCGTACAGCCATAACATACATAGACCAAAGCGGCAATTGGCACCGAGTTAGCAAAGGAGCACCAGAGCAGATTATAGAACTAT GCAATGTTAGGCCAGATGTGAAGAAGAAAGCTCATTCCATAATTGATAAATTTGCAGAAAGAGGTCTCCGATCCCTTGCTGTTGCGAAACAAGAAGTTCC GGAGAGGACAAAGGAGAGTCCAGGAGCACCATGGCAGTTCGTAGGTCTCTTGCCTCTCTTCGATCCACCAAGGCATGACAGTGCAGAGACTATTCGTCGA GCTCTTCAGCTTGGAGTGAATGTTAAGATGATCACAGGTGATCAGCTAGCTATTGGTAAGGAGACCGGTCGTAGGCTTGGCATGGGAAGTAACATGTATC CGTCTTCCTCTCTCCTTGGTGAGGACAAGGATTCGACTATTTCCGGTCTTCCAATTGATGAACTTATTGAGAAGGCTGATGGATTTGCTGGAGTCTTCCC TGAACACAAATATGAGATTGTGAAGAGGCTCCAAGATAGAAAACACATATGCGGTATGACAGGTGATGGTGTCAATGATGCTCCAGCCCTGAAAAGGGCA GATATTGGAATTGCAGTGGCTGATGCAACTGATGCAGCTCGTGGCGCATCTGACATAGTCCTGACTGAGCCTGGTTTGAGTGTGATTATAAGTGCAGTCT TGACAAGCAGGACAATTTTCCAAAGAATGAAAAACTACACCATTTACGCTGTTTCCATAACAATCCGTATTGTGCTAGGCTTTTTGTTGCTAGCTCTTAT CTGGAAATTCGACTTCTCGCCATTTATGATTTTGATCATTGCCATACTAAATGATGGAACGATTATGACCATTTCCAAGGATAGGGTAAAGCCATCTCCT TTGCCAGATTCATGGAAACTGAATGAGATTTTCGCCACTGGCATAGTGCTAGGCACCTACCTTGCTATCATGACCGTTGTCTTCTTCTGGGCTGCTCATG CAACAGATTTCTTCTCAGAAAAATTCGGCGTTCACTCTATTAGGGAAAATGAAGATGAGCTCACAGCAGCTATTTACCTTCAAGTGAGTATTGTAAGCCA GGCTCTCATCTTTGTTACTCGGTCAAGAAGCTGGTCTTTCCTCGAACGCCCCGGACTCTTACTTGTTATAGCCTTTATCATAGCACAACTAGTTGCCACA TTAATAGCTGTCTATGCCGACTGGGGCTTTGCAAAGATGAAGGGAATCGGTTGGGGTTGGGCCGGTGTTATTTGGCTCTACAGCATCATTTTCTACTTTC CCTTGGATGTTATTAAATTTATCATCAGATATGTATTGAGTGGCAAGGCATGGAAGGGTATTACTGAGAATAAGACTGCTTTTACATCGAAGAAGGATTA CGGAAAGGAAGAGCGAGAAGCACAATGGGCTACAGCGCAACGCACATTGCATGGACTAAACCCTCCCACAACAAAACAAATATTGGATGAACACACTAGC TATAGTGAATTGTCCGAAATTGCAGAACAAGCCAAAAAACGCGCTGAAATTGCAAGGCTGAGGGAGCTCCACACACTAAAGGGTCATGTTGAATCAGTAG TGAAGCTAAAGGGACTTGACATTGACACAATTCAGCAGCATTACACAGTTTGAGTAAAAAGCAAAGTTCTATTTGAATGTAGTGTAATAATAAGAGCATG AAAATACTATGGTTGTGTTAGTTTTTTAGTATCTTAAACTTGAATTTGTATTAGGAAGATGCATGGGCTTTAAAATAATTCTGTACTTTGAGATTGTGCA TAAACAATCCAAGTTTGATTGGACATAACAAATTATTATGCTTATGAAATATTATTGTACTTTTATATTTAATTCCTATATGTAAGTATCCAAAGTGGTA CTGCAATGTTATAATAAAGTAAAGTGAAATCAATGAACATTTATATGTATAATCAATGGTGATATTTATTTTGGTAT
• Tissue: pods
• Gene name: LI_gene_193243;
• Additional information: details;

Expression of Ll_transcript_350816

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 4
• PS2: 2.2
• PS3: 5.4
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_350816

• Blastp: Plasma membrane ATPase from Oryza sativa with 83.44% of identity
• Blastx: Plasma membrane ATPase from Oryza sativa with 83.44% of identity
• Eggnog: P-type atpase(COG0474)
• Kegg: Link to kegg annotations (4337257)
• CantataDB: Link to cantataDB annotations (CNT0001630)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443343.1)
• Pfam: haloacid dehalogenase-like hydrolase (PF00702.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;