Ll_transcript_506045

• Id Trinity: TRINITY_DN52507_c1_g1_i3
• Name Transcript: Ll_transcript_506045
• Sequence: TTTATCATCACTGTTGTAATTTCTTGAGAATAAATTATTTCATTATCTTATTGTTTTCTCTCTGTTTTCTGTCGAATTTGATTTCTTCACAGATCATCTT TTCTGATCTTTAGAGAACGATTCTGGCTCTCGCAGTCACGTATCTGATATCAATACTTCTATAATTTGATTTAACATTGTTTAACTATCGTCTTAAATTT GACGAGATCTGTAAAAAGAAATCCAGAACTGAAACCCTAATTTAAATCTAAAATCATCTACTGTAATTTTGGTTTTTTTCGGTTTCGTATCAGTGTGGTG TTTTGATTCATATATGGTTTTTGGATTCGATTGTGATAGAAAGTGGACAATTACGGAAAAAGAAGAGATTGAAGCGATGACGAACGAGATTGAGGATGTA GAAGAGGGTGAGATTTCGGATACTGCTTCTATTGAAGAGATTAGCGAAGAGGATTTCAAGAAGCAGCAAGATGTTGTTAAGGTCAATGATAATAAGGCTA AAGATAATTCAACTGCTAGGGTTTGGGCTGTTCAGGATCTTTACACTAAGTATCCAAGTATTTGTAGTGGTTATGCTTCGGGTTTGTACAATCTTGCTTG GGCACAAGCAGTGAAGAATAAGCCTCTGAATGATATATTTGTGATGGATGTCGATAACTCGAATAAATTGTGTTCGGGTTCTGTTAAGGAGGATGTGGGT ATGAATGGTCAAGTGGTGATTGATCTTGATAAAGAGGATGGGGAGTTGGAGGAGGGTGAGATTGATGGTGATGCTGACCCAGAAGGCGGGAATGTTCAGT ATGATTTGAATTCTGAGGGAAAAAGTGTTAGGGAAGTTTTGGAGGGTTTTACTAATGCTATTGTGGAGGAATCGTTTGCTGAGAGTTGTGACAGGCTGCA GAGTGCTTTGCAGAGTTTGGATGCTGTTTCTGACAAGGATGATGTTCTTGTTGGCTTGTCATTCAATGCAATTGAAGTTAACTATTCTGTATTCTGCTCC ATGGAGAGTTCCCAGAAAGAACAGAACAAGGATATCATAATAAGACTACTTTCTTTTGTGAAGGATCAGCAAGCTCATTTACTCACTCCTGAGCAATTTA AAGAGATTCAGGTCATGATTGCTGCTTTAGATTCTATTGGTGCTTTAGACAATGGTGAGGCTATTGACAAGGAAAAGGAATCACAAAGCAATGAGATAAA AACTCTGGAAACTCAAGATAGAAGAGCTGGTGAATTGATTTCTTCTAGTAAGCCATTGGATAGCATCTCGATTGGGGTATCAGAAGATTTGAAATTTGGA CAAAGTAATTTTAAAGGTAGAGGGGTTCTGGTCCCTCTGTTCGACCTTCACAAGGATCATGATATTGACAGTTTACCATCACCCACACGAGAAACACCAT CTTGTTTCCCTTTGAGTAATGCATTTTCTGTTGGAGAGGGAGTTGTTAGACATGGGTTACCCACACGTGAAATAGCAAGTTTCCCTGTGAATAAACCATT TTCTGCTGGAGACGGAATGATTAGGTCTGAGTTGCCTGCTAGTAAGACGGAGGCTGTGAATATGGAAGTGGATAGTGACGGTTCTAAATTGCATTCCTAT GTAACGGATGCCCTGAAAGCTGTTTCCTCATATCAGCAGAAGTTTGGCCGAAGTACCTTTTTCACGAGTGAAGAACTTCCAAGTCCAACCCCTTCAGGAG GCTGTGAGGATGCGACTGTTGATAAAAATGAGGAGGTTTCTAGTGCTTCGGTGGCTGGTTCTGTAATTAGCATCAAACCACAGCTCCCTGCTTCTTATAT TTCCATGGATAGGTCCAGTATGCATGGATTGAGTAGTTCTAGAATTGATGCAGCAGGTTCTGGGTCTGACTCTAGAAAACCTTCAGTTAAGTCTAGAGAT CCTAGGCTTCGCCTAATTAGTTCTGATGCAAGTGCTTTGGATCTTAACCACCAACATTCCCTGATGAATAATATGCCTAACATGGAAAATGCTGGAACAA TAATCTCAAAAAAGCAAAAGGCTGCAGAAGAGCCTTCTTTGGATGTTGCTGTATCAAAACGACTGAAAACTTCATTGGAAAATCCTGAGCATAACACAAG AGATCCAAGAACTGCAGCCAGAAATCGTGGTTGGTTGGAGGAGACTTCCGCTGTTGGATCTCAATCGATAGTCAGGAACAATGTGGAAGCCGAACCCAAA AATACTATGGGTACAATAAATAGTTCCTGTACTGGTTCCGGTAATTTCAACCTGACAAGTAATGGAAATCAGCAGGCGCCAGTTGCAACTAGTAACACCA CAACTTCCATACCTGCTGGGTGGAAAGATTTAGCTGTAAGCCCAGCAATGCTGGTAAAAATACTTATGGAACGACAGAGATTAGCGGCAGAAACCAAAAA GAAATCTGATGATTATTCTATGAATATGCTAAATCTAGCAAGAGCAAATTCAGCAATGGGAACATGTCCAACTATGAGTATTGGTACTTCAATGACCACT GGGATTCAGCAAAATACTGTTGGAATGCTTCCAATTTCATCACCAGCAACAGCAACTACCACGGTTCGAAGCCCACAAGATGATTCAGGAAAGATTCGCA TGAAACCTCGTGATCCACGGCGCGTTCTCCATGGACGTATGATTCCAAAGAGTGGGATCTTGGCGAGTGAGCAATCAAAAGCAATTGTTCTACCGACATC GGACAACCCAGATACTGGCGACAATGTTAATGCCCCAAAGCTTGAGGTTAGGGCTGACACAAAATTGGCGCCTTCTCAATCAATTGCACCACCTGATATT GCTGGACCGTTCACCAGGAATCTAAAAAGTATTGCTGATACTATATCTGTTACCCAACAATCATCAAACAACTCTCCTGCTACTCAGACATTTTCTTCTG CACCTGTACTTACATCAGATAGAGTGGAACAGAAACCTGTAGTATCTAGCTCGTGGAACCTGCAGGCTAGCGTAGGATCAGCTCCTGAAACATGTGCTTC TGTTTCCTCTACACCTGAGAGCTCATGGGGAGATGTTGAG
• Tissue: pods
• Gene name: LI_gene_193308;
• Additional information: details;

Expression of Ll_transcript_506045

FPKM

• PAB: 0.3
• PNAB: 2.1
• PS1: 2.7
• PS2: 2
• PS3: 2.7
• PW1: 1.3
• PW2: 1.8
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_506045

• Blastp: RNA polymerase II C-terminal domain phosphatase-like 3 from Arabidopsis with 30.93% of identity
• Blastx: RNA polymerase II C-terminal domain phosphatase-like 3 from Arabidopsis with 30.94% of identity
• Eggnog: CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
• Kegg: Link to kegg annotations (AT2G33540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419706.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;