Ll_transcript_506046

Id TrinityTRINITY_DN52507_c1_g1_i4
Name TranscriptLl_transcript_506046
SequenceCTCTTTTTATATAAAAAACCGTATCTACTATTTTTTTTTTTTTTTTTATTTTTATCATCACAGTTGTTATATTGAAATAAAAACTTTTTTAATTTTATTA TCTCATTTTTTCTTCGTTCTGTTTGCGACAGAATTCGATCTCTTTGCAGATCATCTCTGCGGATCTTTCAATAACGAATCTCAATCTCGCAGTCACTTAT CTCCGATTCGATTTAACATTGTTAACTTGTTTTAAATTCGACGAGATTTGTAAAACAATTGAAAACTGAAACCCTAAATTAATCTTGCCGTAAAATCTGT TGTAATTTTGGATTTTTTCCGTTTCTTATCGGGTGGTGTTTTGATTCATATATGGTTTTTGGATTCGATTGTGATAGAAAGTGGAAAGTTACGGAAAAAG AAGAGATTGAAGCGATGACGAACGAGATTGAGGATGTAGAAGAGGGTGAGATTTCGGATACTGCTTCTATTGAAGAGATTAGCGAAGAGGATTTCAAGAA GCAGCAAGATGTTGTTAAGGTCAATGATAATAAGGCTAAAGATAATTCAACTGCTAGGGTTTGGGCTGTTCAGGATCTTTACACTAAGTATCCAAGTATT TGTAGTGGTTATGCTTCGGGTTTGTACAATCTTGCTTGGGCACAAGCAGTGAAGAATAAGCCTCTGAATGATATATTTGTGATGGATGTCGATAACTCGA ATAAATTGTGTTCGGGTTCTGTTAAGGAGGATGTGGGTATGAATGGTCAAGTGGTGATTGATCTTGATAAAGAGGATGGGGAGTTGGAGGAGGGTGAGAT TGATGGTGATGCTGATCCAGAAGGAGGGAATGTTCAATGTGTTTTGAATTCTGAGGGAAAAAGTGTTAGGGAAGTTTTGGAGGGTTTTACTATTGCTAAT GTGGAGGAAGCGTTTGCCGAGAATTGCGGTAAGCTGCAGAGTGCTTTGCAGAGTTTGCATGCTGTTTTTGACAAGGATGATGTTCTTTTTGGCTTGTCAT TCAATGCAATTGAAGTCATCTATTCTGTATTCTGCTCCATGGAGAGTTCCCAGAAAGAACAGAACAATGATAACATATTAAGATTACTTTCTTTTGTGAA GGATCAGCAAGCTCATTTACTCACTCCTGAGCAATTTAAAGAGATTCAGGTCATGATTGCTGCTTTAGATTCTATTGGTGCTTTAAACAATGGTCAGGCT ATTGGCAAGGAAAAGGAATCACAGAGCAATGAGATAAAAACTCTGGAAACTCAAGATAGAGGAGGTGGTGAATTGATTTCTTCTAGTAAGCCATTGGATA GCATCTCGAATGGGGTATCAGAAGCTTTGAAATTTGGACAAAGTAATTTTAACGGTAGAGGGGTTTTGGTCCCTCTGTTCGACCTTCATAAGGATCATGA TATTGACAGTTTACCATCACCCACACGAGAAACACCATTTTGTTTCCCTATGAGTAATGCATTTTCTGTTGGAGAGGGAGTTGTTAGACATGGGTTACCC ACACGTGAAATAGCAAGTTTCCCTGTGAATAAACCGTTTTCTGCTGCAGAGGGAATGATTAGGTCTGAGTTGCCTGCTAGTAAAATGGAGGTTGTGAATA TGGAAGTGGATAGTGACGGTTCTAAATTGCATTCCTATGTAACAGATGCTCTGAAAGCTGTTTCCTCATATCAGCAGAAGTTTGGTCGAAGTACCTTTTT CACGAGTGAAGAACTTCCAAGTCCAACCCCTTCAGGAGATTGTGAGGATGTGGCTGTTGATACAAATGAGGAGGTTTCTAGTGCTTCTGTGGCTGGTTCT GCAATTAGCATCAAACCACCGTCACAGTCTTTGAATCAGCTGCCTGCTTCTTCTGCTTCCACGAATAGGTCCAGTATGCATGGATTGAGTAGTTCTAGAA TTGATGCAGCAGGTTCTGGGTCTGACTCTAGAAAACCTTCAGTTAAGTCTAGAGATCCTAGGCTTCGCGTCACTAATTCTGATGCAAGTGCTTTGGGTCT TAACCATCGACCTTCCCTGATGAATAATATGCCTAACATGGAAAATGCTGGAACAATAATATCAAGAAAGCAAAAGGCTGCTGAAGATCCTTCTTTGGAC GATGCTGTATCAAAACGACTGAAAACTTCACTGGAAAATCCTGAGCGTAAAACAAGAGATCCAAGAACTGCAGCCAGAAAACGTGGTTGGTTGGAAGAGA CTTCCACTGTTGGATCTCAATCGATAGTCAGGAACAATGTGGAAGCCGAACCGAAAAATACTACGGGTACAGTAAATAGTTCCTGTACTGGTTCTGGTCA TTTCAACCCGACAAGTAATGGAAATCAGCAGGCGCCAGTTGCAACTAGTAACACCACAACTTCCATACCTGCTGGGTGGAAAGATTTAGCTGTAAGCCCA GCAATGCTGGTAAAAATACTTATGGAACGGCAGAGATTAGCAGCAGAAACGAAAAAGAAATCTGATGATTATTCTATGAATATGCTAAATCTAGCAAGCG CAAATTCAGCAATGGGAACAGGTCCAACTATGAGTATTGGTACTTCAATGACCACTGGGATTCAGCAAAATACTGTTGGAATGCTTCCAATTTCATCACC AGCAACCACCACGGTTCGAAGCCCACAAAATGATTCAGGAAAGATTCGCATGAAACCTCGTGATCCACGGCGCGCTCTCCATGGGCGTACTATTCCAAAG AGTGGGATCTTGGCGAGTGAGCAATCAAAAGCAATTGTTCTCTCGACATCAAACAACCCAGATACTGGTGACAATGTTAGTGCCCCAAAGCTTGAGGTTA GGGCTGACACAAAATTGGCGCCTTCTCAATCAATTGCACCACCTGATATTGCTGGACCGTTCACCAGGAATCTGAAAAGTATTGCTGATAGCATATCTGT TACCCAACAATCATCAAACAACTCTCCTGCTACTCAGACATTTTCTTCTGCACCTGTACTTACATCAGATAGAGTGGAACAGAAACATGTAGTATCTAGC TCGCAGAACCTGCAGGCTAGCGTAGGATCAGCTCCTGAAACATGTGCTTCTGTTTCCTCTACACCTGAGAGCTCATGGGGAGATGTTGAGCATCTTTTTG AAGGTTATGACGAGAAGCAAAAGGCTGCTATACAGAGAGAAAGGGCTAGGAGGATAGAAGAACAGAATAAAATGTTTGCTGCTAGAAAGTTATGCCTTGT ATTGGACCTAGATCACACACTTCTAAACTCTGCTAAGTTTGTAGAAGTAGACCCTGTACATGATGAGATACTGAGAAAGAAAGAAGAACAAGATCGTGAG AAGCCTCAGAGGCATCTTTTTCGTTTTCCTCACTTGGGAATGTGGACTAAACTACGACCAGGAATCTGGAACTTCTTGGAGAAGGCTAGTAAGCTCTTTG AGCTACATCTTTACACAATGGGAAACAAGCTATATGCAACAGAAATGGCGAAGGTACTCGATCCAAGGGGAACTTTGTTTAATGGTAGAGTTATTTCTAG AGGCGATGATATTGATTCAGTTGATGGTGTGGAGAGAGCCCCCAAAAGCAAGGATCTGGAAGGTGTTTTGGGTATGGAATCAGCTGTTGTAATTATAGAT GATTCTGTGAGAGTCTGGCCTCATAACAAACTAAACTTGATAGTGGTGGAAAGGTATACTTACTTCCCCTGTAGTAGACGTCAATTTGGACTTCCAGGTC CTTCTCTTCTCGAGATTGATCATGATGAAAGACCCGAAGCTGGAACTCTGGCATCTTCTTTAGGGGTGATTGAGAGAATACACCAAAACTTTTTTGCTTC TCAATCCTTGGAAGAAGTGGATGTCAGAAATATCCTAGCATCAGAGCAGAGAAAAATATTGGCCGGTTGTCGTATAGTATTTAGCAGAGTATTTCCTGTT GGCGAAGCCAACCCTCATCTACACCCATTGTGGCAGACAGCTGAACAATTTGGTGCTGTTTGTACAAATCACATTGATGATCAGGTTACACATGTAGTTG CAAATAACCTTGGGACTGATAAGGTGAATTGGGCTCTTTCCATCGGAAGATTTGTTGTTCATCCTGGCTGGGTGGAAGCATCAGCATTGCTTTATAGGAG GGCGAATGAACAAGATTTTGCAATAAAACCATAAAAATGACCAACAACCTAATTCTCTTTGGAAAACTAAAATATGTGAAATCTAAATCAATAATCACAT TGATTTTGGGGTGTGAAACCATTAGATAAGAATTGGTTAGGGGAGACAAGTTTAACTCATGATGCCTGCCTCGAGGTGGCGATCGGCGAGTATGCACAAT TTTACTAAGATGACTGCAAATTTGATGAGAGGAGTTAATGGAGGATTGTGTGAATGACCCTGTGAGTCTTGGGGTCTTTGCTTCTGGGGTTGGTGCTGAA GGGGGCCAAGAAAGGAAGATTGACACTGCTTGAGGGACTAAGTGAGTGGGGTTGGTGGGTTTTGAGAATAGCTCCTAGTAAATTTTGCCTGAGATGGTGT TCAAGATTGAAAATTTGGGTCCAAATTTTTTAAGGGTAACATTTTTTTGTTGCTGACAAGGTAAAGTTAAAAAGGCTCACAGCATTAAAAGAGGTAAAAT GTGAAGGAGTTCTGACTGAAACTAATTTAGGAAAAGAAATAAGGGTTTCCTTTATTAGAATTGAAATCCAAAATACTTGGGGGTGCTAGAACAGCAATAT CATGATATTTCTGGAATTGGATTTCATGTTCCAGAAAAATGAATTTCTGATAATCAAATTGGTATCAGTTGTAACTGTATAATGCGTTTTGAGGGGCTTA AATTAATCACCATTCACCACCACACCCCTCAGAACAAATAAATTTTAGAGGGGGGGAGAGAAGATAGAAAATCACTCAGGAGCGTTCGTAACACTCCTTT GTATTTTTTGTTGGTTCTGCTTTGAATTTTTGCAGATTGTTTGGCCATATAGCTTAGAAAATCTTGATAATTTATAATAATGGTAATCTAATTCATGATA TCATTTTTTCTGAAAATGCCAATGTTACAAAAATAGTAAAAAAAGAAAGCCAGATCATCATACTACTGCGTATTATATACCTG BLAST
Tissuepods
Gene nameLI_gene_193308; 
Additional informationdetails; 

Expression of Ll_transcript_506046

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_506046
BlastpRNA polymerase II C-terminal domain phosphatase-like 3 from Arabidopsis with 44.86% of identity
BlastxRNA polymerase II C-terminal domain phosphatase-like 3 from Arabidopsis with 44.99% of identity
EggnogCTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
KeggLink to kegg annotations (AT2G33540)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419706.1)
PfamNLI interacting factor-like phosphatase (PF03031.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;