Ll_transcript_506047

Id TrinityTRINITY_DN52507_c1_g1_i5
Name TranscriptLl_transcript_506047
SequenceTTTATCATCACTGTTGTAATTTCTTGAGAATAAATTATTTCATTATCTTATTGTTTTCTCTCTGTTTTCTGTCGAATTTGATTTCTTCACAGATCATCTT TTCTGATCTTTAGAGAACGATTCTGGCTCTCGCAGTCACGTATCTGATATCAATACTTCTATAATTTGATTTAACATTGTTTAACTATCGTCTTAAATTT GACGAGATCTGTAAAAAGAAATCCAGAACTGAAACCCTAATTTAAATCTAAAATCATCTACTGTAATTTTGGTTTTTTTCGGTTTCGTATCAGTGTGGTG TTTTGATTCATATATGGTTTTTGGATTCGATTGTGATAGAAAGTGGACAATTACGGAAAAAGAAGAGATTGAAGCGATGACGAACGAGATTGAGGATGTA GAAGAGGGTGAGATTTCGGATACTGCTTCTATTGAAGAGATTAGCGAAGAGGATTTCAAGAAGCAGCAAGATGTTGTTAAGGTCAATGATAATAAGGCTA AAGATAATTCAACTGCTAGGGTTTGGGCTGTTCAGGATCTTTACACTAAGTATCCAAGTATTTGTAGTGGTTATGCTTCGGGTTTGTACAATCTTGCTTG GGCACAAGCAGTGAAGAATAAGCCTCTGAATGATATATTTGTGATGGATGTCGATAACTCGAATAAATTGTGTTCGGGTTCTGTTAAGGAGGATGTGGGT ATGAATGGTCAAGTGGTGATTGATCTTGATAAAGAGGATGGGGAGTTGGAGGAGGGTGAGATTGATGGTGATGCTGATCCAGAAGGAGGGAATGTTCAAT GTGTTTTGAATTCTGAGGGAAAAAGTGTTAGGGAAGTTTTGGAGGGTTTTACTATTGCTAATGTGGAGGAAGCGTTTGCCGAGAATTGCGGTAAGCTGCA GAGTGCTTTGCAGAGTTTGCATGCTGTTTTTGACAAGGATGATGTTCTTTTTGGCTTGTCATTCAATGCAATTGAAGTCATCTATTCTGTATTCTGCTCC ATGGAGAGTTCCCAGAAAGAACAGAACAATGATAACATATTAAGATTACTTTCTTTTGTGAAGGATCAGCAAGCTCATTTACTCACTCCTGAGCAATTTA AAGAGATTCAGGTCATGATTGCTGCTTTAGATTCTATTGGTGCTTTAAACAATGGTCAGGCTATTGGCAAGGAAAAGGAATCACAGAGCAATGAGATAAA AACTCTGGAAACTCAAGATAGAGGAGGTGGTGAATTGATTTCTTCTAGTAAGCCATTGGATAGCATCTCGAATGGGGTATCAGAAGCTTTGAAATTTGGA CAAAGTAATTTTAACGGTAGAGGGGTTTTGGTCCCTCTGTTCGACCTTCATAAGGATCATGATATTGACAGTTTACCATCACCCACACGAGAAACACCAT TTTGTTTCCCTATGAGTAATGCATTTTCTGTTGGAGAGGGAGTTGTTAGACATGGGTTACCCACACGTGAAATAGCAAGTTTCCCTGTGAATAAACCGTT TTCTGCTGCAGAGGGAATGATTAGGTCTGAGTTGCCTGCTAGTAAAATGGAGGTTGTGAATATGGAAGTGGATAGTGACGGTTCTAAATTGCATTCCTAT GTAACAGATGCTCTGAAAGCTGTTTCCTCATATCAGCAGAAGTTTGGTCGAAGTACCTTTTTCACGAGTGAAGAACTTCCAAGTCCAACCCCTTCAGGAG ATTGTGAGGATGTGGCTGTTGATACAAATGAGGAGGTTTCTAGTGCTTCTGTGGCTGGTTCTGCAATTAGCATCAAACCACCGTCACAGTCTTTGAATCA GCTGCCTGCTTCTTCTGCTTCCACGAATAGGTCCAGTATGCATGGATTGAGTAGTTCTAGAATTGATGCAGCAGGTTCTGGGTCTGACTCTAGAAAACCT TCAGTTAAGTCTAGAGATCCTAGGCTTCGCGTCACTAATTCTGATGCAAGTGCTTTGGGTCTTAACCATCGACCTTCCCTGATGAATAATATGCCTAACA TGGAAAATGCTGGAACAATAATATCAAGAAAGCAAAAGGCTGCTGAAGATCCTTCTTTGGACGATGCTGTATCAAAACGACTGAAAACTTCACTGGAAAA TCCTGAGCGTAAAACAAGAGATCCAAGAACTGCAGCCAGAAAACGTGGTTGGTTGGAAGAGACTTCCACTGTTGGATCTCAATCGATAGTCAGGAACAAT GTGGAAGCCGAACCGAAAAATACTACGGGTACAGTAAATAGTTCCTGTACTGGTTCTGGTCATTTCAACCCGACAAGTAATGGAAATCAGCAGGCGCCAG TTGCAACTAGTAACACCACAACTTCCATACCTGCTGGGTGGAAAGATTTAGCTGTAAGCCCAGCAATGCTGGTAAAAATACTTATGGAACGGCAGAGATT AGCAGCAGAAACGAAAAAGAAATCTGATGATTATTCTATGAATATGCTAAATCTAGCAAGCGCAAATTCAGCAATGGGAACAGGTCCAACTATGAGTATT GGTACTTCAATGACCACTGGGATTCAGCAAAATACTGTTGGAATGCTTCCAATTTCATCACCAGCAACCACCACGGTTCGAAGCCCACAAAATGATTCAG GAAAGATTCGCATGAAACCTCGTGATCCACGGCGCGCTCTCCATGGGCGTACTATTCCAAAGAGTGGGATCTTGGCGAGTGAGCAATCAAAAGCAATTGT TCTCTCGACATCAAACAACCCAGATACTGGTGACAATGTTAGTGCCCCAAAGCTTGAGGTTAGGGCTGACACAAAATTGGCGCCTTCTCAATCAATTGCA CCACCTGATATTGCTGGACCGTTCACCAGGAATCTGAAAAGTATTGCTGATAGCATATCTGTTACCCAACAATCATCAAACAACTCTCCTGCTACTCAGA CATTTTCTTCTGCACCTGTACTTACATCAGATAGAGTGGAACAGAAACATGTAGTATCTAGCTCGCAGAACCTGCAGGCTAGCGTAGGATCAGCTCCTGA AACATGTGCTTCTGTTTCCTCTACACCTGAGAGCTCATGGGGAGATGTTGAGCATCTTTTTGAAGGTTATGACGAGAAGCAAAAGGCTGCTATACAGAGA GAAAGGGCTAGGAGGATAGAAGAACAGAATAAAATGTTTGCTGCTAGAAAGTTATGCCTTGTATTGGACCTAGATCACACACTTCTAAACTCTGCTAAGT TTGTAGAAGTAGACCCTGTACATGATGAGATACTGAGAAAGAAAGAAGAACAAGATCGTGAGAAGCCTCAGAGGCATCTTTTTCGTTTTCCTCACTTGGG AATGTGGACTAAACTACGACCAGGAATCTGGAACTTCTTGGAGAAGGCTAGTAAGCTCTTTGAGCTACATCTTTACACAATGGGAAACAAGCTATATGCA ACAGAAATGGCGAAGGTACTCGATCCAAGGGGAACTTTGTTTAATGGTAGAGTTATTTCTAGAGGCGATGATATTGATTCAGTTGATGGTGTGGAGAGAG CCCCCAAAAGCAAGGATCTGGAAGGTGTTTTGGGTATGGAATCAGCTGTTGTAATTATAGATGATTCTGTGAGAGTCTGGCCTCATAACAAACTAAACTT GATAGTGGTGGAAAGGTATACTTACTTCCCCTGTAGTAGACGTCAATTTGGACTTCCAGGTCCTTCTCTTCTCGAGATTGATCATGATGAAAGACCCGAA GCTGGAACTCTGGCATCTTCTTTAGGGGTGATTGAGAGAATACACCAAAACTTTTTTGCTTCTCAATCCTTGGAAGAAGTGGATGTCAGAAATATCCTAG CATCAGAGCAGAGAAAAATATTGGCCGGTTGTCGTATAGTATTTAGCAGAGTATTTCCTGTTGGCGAAGCCAACCCTCATCTACACCCATTGTGGCAGAC AGCTGAACAATTTGGTGCTGTTTGTACAAATCACATTGATGATCAGGTTACACATGTAGTTGCAAATAACCTTGGGACTGATAAGGTGAATTGGGCTCTT TCCATCGGAAGATTTGTTGTTCATCCTGGCTGGGTGGAAGCATCAGCATTGCTTTATAGGAGGGCGAATGAACAAGATTTTGCAATAAAACCATAAAAAT GACCAACAACCTAATTCTCTTTGGAAAACTAAAATATGTGAAATCTAAATCAATAATCACATTGATTTTGGGGTGTGAAACCATTAGATAAGAATTGGTT AGGGGAGACAAGTTTAACTCATGATGCCTGCCTCGAGGTGGCGATCGGCGAGTATGCACAATTTTACTAAGATGACTGCAAATTTGATGAGAGGAGTTAA TGGAGGATTGTGTGAATGACCCTGTGAGTCTTGGGGTCTTTGCTTCTGGGGTTGGTGCTGAAGGGGGCCAAGAAAGGAAGATTGACACTGCTTGAGGGAC TAAGTGAGTGGGGTTGGTGGGTTTTGAGAATAGCTCCTAGTAAATTTTGCCTGAGATGGTGTTCAAGATTGAAAATTTGGGTCCAAATTTTTTAAGGGTA ACATTTTTTGTTGCCAACAAAGCAAAGTTAAAAGGCCTCAGCATTAAAAGAGGTAAAATGTGAAGGAATTCTGACTGGAACTAATTTAGGAAAAGAAATA AATTCCTGATAAACAATATCAGGATTTTTCTGGAATTGGATTCATGCTCCAGCAAAATAAATTCGTGATAATCAAATTGGTATCAATTGTAACTGTATAA TGTGTTTGAGGGGCTTGAATCAATCACCATTCACCAATCACCACCCTCACAACAAATAAATTTTAGTAGTGAGGGGGAAAAGATAGAACATGATCAAGAA GCGTTCATAACAGTCCTCTGTAATTGTTGTTGGTTCTGCTTTGAATTTTTGCAGATCGTTTGGCCATATAGCTTAGAAATTCTTTATAATTTATAAAAAT G BLAST
Tissuepods
Gene nameLI_gene_193308; 
Additional informationdetails; 

Expression of Ll_transcript_506047

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_506047
BlastpRNA polymerase II C-terminal domain phosphatase-like 3 from Arabidopsis with 44.86% of identity
BlastxRNA polymerase II C-terminal domain phosphatase-like 3 from Arabidopsis with 44.99% of identity
EggnogCTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
KeggLink to kegg annotations (AT2G33540)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419706.1)
PfamNLI interacting factor-like phosphatase (PF03031.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;