Ll_transcript_506109

Id TrinityTRINITY_DN52515_c1_g1_i16
Name TranscriptLl_transcript_506109
SequenceAGAAAAACGAGTGTAACAGCTATATATCATCTTCATACGTTTACAATGGGCTAGTTTCTCAAATCAATTTTTTTTGAGAATTTTGGTTAATCCAATTAGG GTTTCCAAAAGTGTTCTTCTTTTTATATTTTACTATAAATTCATAATCGAATTAGCTTTTTCTCTTATCGGAATCAACAACGCTGGGGAGTGAAGAATCT GATTTAGGTCCTCGCTCTCTTTTTTTCTTCTCTCGCTTTTGGAACTCTCTTATGAACGATAACATGGAAGTCGATTTACCCTCTGATTCTCTATCACTCA AGCCCCGTGATCGAATTATTAGGAGGCTTGCTCAGTTTGGAGTTCCTGAGGAGCAGCTTGACCAGCCTGGTTTGGTTGCTTTTGTTAAGGATAAGAGGGA GTTGATACCTGAGCTGGTGTCTGTTATATTGCCTACTGATGTGGAAGTGGGTGAAGCATTGCCGGATTCTAAATCGGGCTCGAAGAAATTGCCGTTGGGT GTTACTATGAAGAAGACTTTCCGTCATAGCATGGTGTGGTTGCAGTGGCTAATGTTTGAGGGTGATCCTGGTGCTGCCCTGAAAGGCCTTTCTGAGATGT CTGTTGGGCAGAGGGGTGTGTGTGGGGATGTTTGGGGACATAATGATATAGCTTACAGGTGCAGGACCTGTGAGCACGATGGGACTTGTGCAATTTGTGT TCCTTGTTTTGAAAATGGGGATCACAAGGGCCATGATTACTTTGTTATATACACAGGTGGTGGGTGTTGTGATTGTGGGGATGTGACGGCGTGGCAACGC AAGGGTTTCTGCTCGAAGCATAAGGGTGTCGAGCAGATACAGCCTCTTCCAGAGGAATTATCAAACTCTGTTGCACCTGTGCTTGGTTCTCTATTTATTT GTTGGAATGCCAGACTAAAGTTTGCAAGTGATTCTGCCATGTCTGCAGAAAGAAAGAAGGCTGGAAATGAGCTAACTTTTGCTGTAGTTGATATGCTTTT AGAATTTTGCAAGCATAGTGAGAGTTTGCTAAGTTTTGTTGCTAGGTCATTGTTCTCTTCTACTGGTTTATTGAACATCCTAGTGAGAGCTGAGAGGTTT TTAGCTGATGTTGTTATAAGGAAACTCAATGAGCTACTCTTGAAATTATTGGGTGAACCTATTTTTAAGTATGAGTTTGCCAAGGTTTTTCTCGCTTACT ATCCAACTGTTGTAAATGAAGCCATAGAAGAGTGCAGTGACCAACCTCTAAAGAAGTACCCTCTGCTGTCCACATTCTCCGTGCAAATACTTACAGTGCC CACCCTTACCCCACGTCTTGTGAAGGAAATCAACCTACTAGCCATGCAGTTGGGATGTTTAGAGAAAATTTTCAATTCTTGTTCAGAGAATGGTCGCTTG CAGATTTCCAACTGGGCAAATTTGTATGAGACAACAATATGTGTTGTCAAAGATATTCGTTTTGTTATGAGCCATGTGGTGGTGCCCAAATATGTAACCA ATGACCAGCAGGATATCTCAAGAACATGGATGAGACTCCTGTCCTTTGTGCAAGGGATGAACCCTTCGAAGCGAGAAACAGGTCAGCATATAGAAGAAGA AACTGAAAATGTCCATTTGCCTTTTGTTTTAGGCGACTCTATTGCCAATATTCATTCTCTATTGGTGGGTGGGGCATTTTCTGATTCCAGCAAGGGAGGG ATGGAGGATGAAATTGTTTGGATCTCAGAAAAGCATGAAACAGATGATGGAGATAATGTAAGAAATACGAAGGTAGGGCGGCTATCCCAGGAAAGCTCTG CATGTTGCGTAACAAGTAATAACAGCGCCTTTGCTTCACCAAAGGTTCCTGAGATAGAATCTGATGCCTCTTCTCCTTTTGATCTTCCACATTCTGTCAC TTGGTTGATATATGAGTGTTTAAGGGCTATTGAGCATTGGTTGGAAGTTGAGAATACCCCAGGTTCACTTCCTAACATGTTTAACAGTGATAGTGTCTAT GATGGCAATTATTCAGCATTTAAGAGAACAATATCTAATTTCAGAAAGGGTAAATATACTTTTGGTAAGCTTGCAAGTTCAAGCGAAGACTATGGTAAGC GATGCTCTGATTTCAGTCTTGATGGCTCGGAAATGGGTAAAAATATAGTGAAGGATGGTAAACTGAAAACAAATGGTGAAATTGATTCTGAAAACACCAG CACTTATCTTGGTTTTGATAATAATGCAACGGAAGAGGATTTTCCTGCAGAATCAGATTGTCTACGTTTTTTATCGTCACCTGATTGGCCACATATTGTC TATGATGTTAGTTCACAAGATATATCTCTACACATTCCATTACATAGATTACTATCTATGTTGTTACAGAAGGCACTAGTAATATATTTTAATGAATCCA AAGTGCATGATGTGACCGATGATTGTTCTACTAACTCATTGTCAACAATCCGCGTTGACTTCTTCGGACGTGCTTTACGTGGAACTCATCCTCATGGTTT CTCTTCCTTTATAATGGAGCATCCACTGCGGATAAGAGTATTTTGTGCTGAAGTTCATGCTGGAATGTGGCGAAAAAATGGAGATGCTGCTTTACTATCT TATGAATGGTATAGATCAGTACGCTGGTCTGAACAAGGTCTGGAGCTTGATCTATTTCTTCTTCAGTGTTGTGCTGCATTTGCTCCAGAAGATCAATATG TCAGTAGAATTCTAGATCGCTTTGGATTATCAAACTACTTGTCTCTGAATCTTGAACGGTCTAGCGAGTATGAACCTGTTTTAGCTCAGGAAATGCTTAC TCTTATTATTCAGATAGTAAAAGAAAGGCGCTTTTGTGGGCTAAATACTGCTGAAAGTTTGAAAAGAGAACTAATTTATAAGTTAGCCATTGGAGATGCT ACTCATAGTCAATTAGTAAAGTCTCTTCCTCGTGATCTCTCCAAGTTTGAACAGCTTCAAGACATTTTGGATACTGTTGCTGTTTATTCTAATCCATCTG GCTTTAATCAGGGCATGTATTCTCTGAGGTGGCCATTTTGGAAAGAATTGGATTTGTATCATCCTCGTTGGAACTCGAAGGATTTACAAGTTGCTGAAGA AAGATACGTACGTTTCTGTGGTGGCTCTGCATTAACTACTCAGTTGCCCCGGTGGACCAACATTCATCCTCCTCTGAAGGGGATAGCCAGAATAGCCACC TGCAAAGTTGTTATGCAGATTATCCGTGCAGTACTATTCTATGCTGTTTTTACTTTTCAATCAGCTGAGTCTCGTGCTCCTGATGATGTTCTTTTACCTG CACTGCATTTGCTATCATTATCATTAGATATATGCTTTCAGCAAAAAGAATCTAGTGAGAATATATATCATGATGTGGCACAAATTCCTATAATAGCCTA CTCTGTAGAAATTATTGATGCAAATGCTTTTTATGGTGTTGGCGAACAAAGCTTGTTGTCTCTTCTTGTTGTGTTGATGGAAATGAACAGGAAGGAAACT GCAGACAACTTTGTAGAAGCAGGTGGTTTCAGTGTGTCATCTTTAATTGAAAGTTTACTGAAGAAATTTGCCGAGATTGACCACAGGTGCATGACTAAGT TGCAAAAACTTGCCCCTGAAGTTGTGAGTCATATTTCTGAACGCTGTCCAACTAGAGACTTAAGTGTCTCATTTTCAGCTTCTGATAGTGAGAAACGCAA AGCAAAAGCTCGAGAGAGGCAGGCTGCAATAATGGAAAAGATGAGAGCCCAGCAAACAAAGTTTTTGGCCAGCATTGATTCCACTGTTGCTAATAGTTCT CAAGTTGGTCATCAAGAAGGTGATTTTGACACTGATGCTGAAGAATCTAAACAAGTTGTTTGCTCTCTATGCCATGACCACAGTTCAGAACATCCAATTT CATTTTTGGTTCTTCTTCAGAAATCTAGGCTTGTGAGTTCTGTTGACAAGGGTCCCCCATCTTGGGACCAACTTTGCCGATCAGATAAACAACACATGCC TACCACCACTAAGATGACAGATACATCGGTTATAAACTTGACCTCAAGTAGTTCAGGATCAACTTCATCTTCCCACTTAACTCAGTTAGTTCAGATTGCT GCCAATGAACTAGCTTCTAGTGGGGATCCTGGGGAAGTTAATGCTTTTCTGCAATATGTCAAGAATCAGTTCCCATCTTTGGGAAATTTTCAGCTCCTAG ACACATCTATTGATGAAAAAGAAAAGACACCATATACTTTTGACAATTTAGAACATGGTATGTACTTCTCCATTCGGGAGGAAATGCGTGATCTTGCGAT GTCCTCAAATATGATGAATGAGGATGAGAAAGTTCCAACAACCGGAGGGGATACAAATACTATAATAGATACCGAATCTGTATTGCTCGGGAAATATACT GGTGATCTTGTGAGAGAGATGTCAGAAAGCTCTTCCGCATCTGAAATTGCTTGTACTGAGAATACTTATGTCGAATCGACAACACAGCATCCATCATATG ATGGATTTGGCCCTACAGATTGTGATGGAGTTCATCTTTCTTCATGTGGGCATGCAGTACATCAAGGGTGTCTTGACCGATATTTGTCTTCATT BLAST
Tissuepods
Gene nameLI_gene_193371; 
Additional informationdetails; 

Expression of Ll_transcript_506109

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_506109
BlastpE3 ubiquitin-protein ligase PRT6 from Arabidopsis with 49.38% of identity
BlastxE3 ubiquitin-protein ligase PRT6 from Arabidopsis with 48.9% of identity
EggnogUbiquitin protein ligase E3 component n-recognin 3(ENOG410XRM3)
KeggLink to kegg annotations (AT5G02310)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019412985.1)
PfamPutative zinc finger in N-recognin (UBR box) (PF02207.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;