Ll_transcript_506792

• Id Trinity: TRINITY_DN52520_c0_g1_i3
• Name Transcript: Ll_transcript_506792
• Sequence: GGAAAAGACACTCGAAAAAATTTAGTTTCTCACCTCTATGATGCACTAACACAAGCAGGAATAAACACTTTCTTTGATGATGACAAACTTGACAAGGGAG AGGAAATTGGAGAAGAACTATTGAGAGCAATAGAAACATCTCGGATATCAATTGTTGTATTCTCAAAGACATATGTTAAATCTCGTTGGTGTGTTAATGA ATTGGTGAAGATAATGGAATGTAGAGAAAATAAAGGACAAGTTGTTATGCCAGTGTTTTACAATGTTACAGCATCGTCTCTAAGGTTTAAGGAGGTTGTT TTTGGAGCAAATAATGAAGAGATTAGAAGAAGAAGAACATGGCATCAAATGGGGATTGAGGTTGCACTTGACAAAGCTTCACGTTTGGCTGGTTGGGATA TTACAAATCACAGGAATGAAAGCATGGTAGTGAAGGAAATTGTTGGGGCTGTTATGGAAAAACTAGACTTCAATGCTATGTCTATACCAGATTTTGCAGT TGGATTAGAATCTCGAATGAAAGATTTGATTGAAGTTCTAAAGAGTCAATCAAAAGGAGTCTGTATAATAGGCATATGGGGAATGGGAGGAGTTGGTAAA ACAACCATAGCCAAAGCCTTGTACAATAAAATTCGTCGTGATTTCGAAGATAAAAGTTTTCTCGCAAATATCAGAGAAGTTTGGGAGAAAGACATGGGCC AAATTGATTTACAGAAACAACTTCTGTCAGACATTCTTAAAATAAGAAAGATGAATATGCGAAGCGTCGAGTGGGTGAAAGGTATGATAAAGGAGAGACT TTGCAGAAAAAGGGCGCTTATTGTACTCGACGATGTAACTACGTTAGAGCAAGTAAATGCACTATGTGGAAATCGTGAATGGATCGGTCAAGGGAGTGTT ATAATCGTGACAACAAGAGATGTGCGAATACTCAATATCCTTGAAGTCGACGATATCTACAGAATGAAGGAAATGGATGAAAAAGAGTCCCTTGAGCTTT TCAGCTGGCATGCTTTTAGGGAAACAAGTCCACAAGAAGATTTCTTTGAGCTCTCAAGAAGTGTAGTCACTCTTTGCGGAGGATTGCCGCTAGCTCTTGA AGTCCTTGGATCTTATTTATACAAGAGGGAAAAGGAGCAATGGAGAAGTGTATTGTCTAAACTGAAAAGAATTCCGAATAATCGAGTACAACAGAAATTA AGAATAAGCTTTGATGGTTTAGAGGATCCTATGTTGAAGGACATATTTCTTGACATATGTTGTTTCTTCATAGGAAAAGATAGAGCTTATGTTACTGAGA TATTGAATGGATGTGGACTTCATGCTGATATTGGAATAGCAGTACTGATAGAGCAGAGTCTTGTAACAATTGTAAAGAATAACAAGCTTGGAACACATGA TTTGCTACGAGACATGGGGAGAGAAATTGTTCGCGAAAGATCACCCGAGAACCTCGAGGAGCGTAGTCGACTGTGGTTGCATGAGGATGCACTTGAAGTA TTGACAGCAAATACTGGAACGAAAGCTGTTGAGGGATTCACTTTGAGGTTGCATGAAGCTAGTGAAGCATGCTTCAGTACCAAAGCTTTTATGAAAATGA ACAGGCTGAGACTTTTGCAACTTTATCATGTACAACTTTCAGGAGATTATAAGCATCTACCCAAACATCTGAGATGGCTCTATTGGCAAGGATTTCCATT AACATACATACCTAACAACTTTTATCAGGGAAATCTAGTTGCTATTGCCTTAAAGCACAGTAATCTTAAACTAGTTTGGAAGGAACCACAGTTGATGGAG AGGTTGAAAATCCTCAATCTTAGTCATTCCAAGTCCTTGACAAAGACCCCAGATTTTTCAAAACTACCTAATCTTGAGAAGCTCATCCTCAAAGATTGTC CAAGCCTGTCCGAGGTACATCAATCCATCGGAGATCTCCGTAATCTTCTTCTGATAAATTTGAAGGGCTGTACAAGCCTTAGAAATCTCCCAATGACAAT CTATAAGTTGAAATCCGTAAAAACTCTCATTATTTCTGGTTGCTCTATGATTGACAAATTTGAAGAAGATATAATACAGATGGAATCCTTGACAACACTA CTTGCAGACCTTACTGGTATAAAACTGATCCCTTTTTCGATACTAAGATCGAAAAGTATTGGATATATATCCCTATGTGGACATGAAGGATTAGCCCATG ATGTATTTCCTTCTTTCATATGGTCTTGGATGTCACCGGCAAATCTCAAATTCTGCATTCCACAATTTTGGAGCATGTCCACATCATTAGTCTCCATGGA TGTACAGCAAAATTTGGGTGGTGTACTAACAATGCTTACTGGACTTTCAAAACTCCGAAGTGTTTCGGTGCAATGCAACTCGGATTCTCAACTAACTAGT GAATTAAGAAGAATTGTGCATGGACTATCTGATGTAAGTTTTACTGAATTGGAAACAACTTCATATGCAGCACAAATTTCAGAGAATTCCATTGGATATC TTTTGATTGGAATGGGAAGTTTCAAAGAAGTCATCAATACACTTAGCAAGACCATATCTGAGGTTATCTCTCCCTCTCTCTTTACATGAAATAATCTTTA CTTGGTGAAAACATGTCATGTTTTATTGTGATCAATAGGAATCTAATAACACTTGAAGCTTAGCAACAACAAATTGAAAATCAATTTCCACATTCTCCGT ATCGCCATGATAAATGGTTTTGAACGAGTTCGTGAATCTAGTAGGATAAAGGCTTGGTTGTTCGTATATTAAATATCTAATCTTTTGCACATGGTACAGG GTTCAAATGGTTCTAGTGATCTTGTCCTTCCAGGTGACAATGTTCCTTATTGGTTAGCCTATGAAGGTGAAGGACATTCAACACTTTTTGAAGTGCCTTG TGAGGATAGAGATTGGTGCATGAAGGGAATGACATTGTGTGTTGTTTATTCATCAACCCCTCAAAAAATGGAAGCTGAATATCCTTTTATTCTCTTAATC ATTAATCATACAAAGTTAACCATGCAGATATACAAGAGAGATACAAAAGCTTACCTTTTTAATGATGAAGAGTGGCAAGGCATAATATCAAATTTAGGAG CTGGTGACAAAGTGCAGATCTTTTTCGCTTTCGGGCATGGCGTGACTATCGATAGGACTGCTGTCTATCTCATAAATGATCAGCCAATTACTCTCGAAAC AGAGGCATCGGCATATGCGAAAATCGAGCAATCAACAAATGCGAAAATCGAGCAATCAACAGAGCTATCAGCAGAGGTGAAAACTACCAATCCATCAGTG AAGCCAAACAAAAATATCTTTAGAAAACTTACAAAGAAAATGCGAGAATGCATGTGCGTAAATCGGAACGAAGGATTGTCTTGTTTTCTGTGTTTTCCGA TCCCTGCTGCTGCTACCTCAGAATCATCACCTCTCTTAGGACACCAAGAATGAAAAACATTGCCAAAATAAGAACAGTGCTGCCTGAAGGGTCTGATAAA GTCTCACCAGAGCAAATGAAAGTGTCTATCTGCACTCAAATGCTGATGGCTCCGTTTGGATAGTATTTGGAAGAACAATACTTGATTAACATACATTTTC TCGAGTGTATGAATATATGTTGATTATTATGACTCAGAAGCTCTTATGTTTCTCGAGTGTACTCTTTCCCGAGTGTATGAATATATGTGTACTTGGAGTA CTTATGTGACTCATTATGCCATTCATGTAAGAATTTATTTTTTATGCGTCGATTTTCTTTTTCATTATATAAACTGTGTATCTTGTTGATGAATAAGATG AATTCTTCTACG
• Tissue: pods
• Gene name: LI_gene_193406;
• Additional information: details;

Expression of Ll_transcript_506792

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0.7
• PW2: 0.4
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_506792

• Blastp: TMV resistance protein N from Nicotiana with 37.4% of identity
• Blastx: TMV resistance protein N from Nicotiana with 37.4% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020238488.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;