Ll_transcript_506813

• Id Trinity: TRINITY_DN52520_c0_g2_i17
• Name Transcript: Ll_transcript_506813
• Sequence: AACTTATTCCACATCTTATCCATAAATTTTAGGGAAATCCAATGGTTTAAATTAGTGAGTAGATCTAAATCATTAGAACTCATTAGAATTGATGGTTAAG ATGTAAAGTAAATTTAAAAATCTTACTCATTAGAATAAGTGGATCCCGGCTCATAAAATTTTATACATACTAATACAGGTTAAAGTGGACAAGGTGGGTT ATTTGAGTCATGTCTTTAGAAACTATGGTCCTATTCCAGGCACATCATTTTCTAGCTGTATTTGATGAATCAAACTATTTCAATTTTTTATGTCAATAGT GGTGGCTAACAACTAGGGCCCCTTATTGTTTTGAATTTGCATTGAGGTCACATTATTGCTAGATGGCACCCATTTTGCTGATAATTATGGCATTTTTGTG GTACAGAAAAAAAGTTGCACAAGTTCATTGTTTTCTTACATTTGTAGCACTTTTTTCCATGGGAAAAAATGGTAATCAAATATTGAAAAAAATAGGGAGA AGAAAGAATACTACAAACTACAGAGAATTTGTATGGGTCCTAGAGAGCGCTATTAATAGAGACATGAGTCCAATATACACAAATTTTCCATTCTAATACT AGATAATATAGGATATCTTAGAAAATCTACACAAGAATCTTCATCGTACCGAATAAAAGCAGCTTGGCATAAAATCTAAAACTATCTGAACTCCCTCCCA TACTCTCACCATGTCTTCTTCTTCTTCTTCTTACTATCTATATGATGTGTTTTTGAGTTTCAGAGGTGAAGACACTCGCAATAACTTCACTTCTTCTCTC TACTCAGCTCTCACTGATCTCAACATCAATACCTTCATGGACAAGAATCTTGATAAAGGAACAAAGGTGAAACCTGAATTATATAGAGCAATAGAAGGAT CTAGAATATCCATGGTTGTTTTCTCACCAAGGTATGCGGGATCAAGATGGTGCCTTGATGAACTTGTGAAGATTATGGAGTGTCATAGAAGTAATGGTCA ACTTGTTGTTCCAGTCTTCTATAACGTTGACCCTGCACATGTACGCCATCAGATTGGTGACTTTGGTGATTCTTACACACAGCTTCTAAGGAAACAGAGA TGGGTCAATCATGCAAATGTCTTGGCTGAATGGAAGACAGCACTCACTGATGCTGCTAATTTTGTTGGTTGGCCTGTTAAATCCGACAATTACAATGTCA TCAAGCTTATTGTTCAGGATATTTACCGAAGGTTAGACAGCACATCCTTACCTATTACAGATTTTCCAGTTGGGTTAGAATCTCGTGCCCGTGTTGTGAT TGAGCTTTTGAAAGGACAATCAAGCGCAGTTCGTGTAATAGGGATATGGGGAATGGGAGGATCTGGTAAAACAACCTTAGCCAAAGTAATCTTCAATCAA ATTCATAGGGATTTTGTAGGTACAAGTTTCCTTGCTAATATTAGAGAAGTTTGGGAGACAAATGGAGGCCAAACTGATTTACAAGAACAATTACTTTTTG ATATCCTTAAGTTAGAAAAGATGAAGATACATAACATTGAGTTGGGAAAGGCTATGATCAAGGGAAGACTGTGTGGAAGTAAAGCACTTGTTGTACTTGA TGATGTGAGTAAGGACGAGCAATTACAAGCCCTATGCGGAAATCGTACATGGATTGGTCCAGGAAGTGTAGTAATCGTTACAACCAGAGATGTGCGTCTA CTTAATGTACTCAAAGTTGACCATGTCTCCAAAACAAAAGAATTGGATAAAAGTGAGTCCCTTGAGTTGTTCAGTTGGCATGCTTTTAGGGAAGAAAGAC CAAGAAAAGACTTCATTGAACTCTCAACAAATGTAGTAGCTTATTGTGGAGGATTACCACTAGCTCTTGAAGTCCTCGGATCCTATTTGTTCGAGAGGAC AACACTAGAGTGGAGAAGTGTCTTGTCCAAACTAGAAATGATTCCCAATGATCGAGTGCAAGAGAAATTAAGAATAAGCTTTGACGGTTTAAGGGATCAT ATGGAGAAGGCTATATTTCTTGACATATGTTGTTTTTTTATTGGCAAGAACAGAACCTATGTTAGGGAGATTCTAGATGGATGTGGACTTCGTGCTGAAA TTGGAATAACAGTCCTTCTGGAACGGAGCCTCATAAAAGTTGAAAAGAATAACAAACTTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATTGT TCGTGAAAGTTCACCAGAGGAGCCTGAGAAGCGGAAGCGACTGTGGTTTCATGAGGACGTACTAAAAGTATTGACAGAACATACTGGAACAAAAACTGTC GAGGGATTGACTTTGAAGTTGCAAAGATTCAGTAGAGATTGCTTCAATACCAAAGCTTTTGAGAAAATGACGAGGCTTAGACTTTTGCAGCTTGATCAAG TACAAGTTGATGGAGATTATGGGTATATTCCCAAACACCTGAGATGGGTTTACTGGAAAGGATTTCCTTTAAAGTGCACACCTGATAACTTTTACCTGGG AAATGTAGTTGCTTTGGACTTGCGACACAGTAATCTTAAACTGGTTTGGAAGGAACCTCGGGCTCTACAGATGCTAAAAATCCTCAATCTTAGTCATTCC AAGTACTTGACTAACACCCCTGATTTCTCAACACTCCAAAAACTTGAAAAGCTCATCCTCAAAGATTGTCCAAATTTGTCCGAGGTACACCCATCTATTG GAGATCTCAATAGTCTCGTTCTCATAAATTTAAAAGATTGTACATCCCTTAGAAATTTCCCAAGGACAATCTATAAGTTGCAATTTTTGGAAACTCTAAT CATTTCTGGTTGTTCAAAGATTGACAAGTTGGAAGAAGATATAGTGCAGATGAAATCCATGACAACTCTGATTGCGAAAAATACTGCTATAAGACATGTT CCTTACTCAATAGTAAGATTGAAAAGCATTGGATACATATCCTTATGTGGATATGAAGGATCATCATGTGATGTTTTTCCCTCTCTCATTTGGTCTTGGA TGTCACCAACATTGAATCTAGAACACTCTAGTAACCCATTTGGGGGTATATCATCACTATCTCTAGTTTCCGTTAATATGTATGGCAAGAATTTGGGTGA CCTATCATCAATGCTTAGCAGCCTTTCAAAACTTCGAAGTGTTTGGGTGCAATGTCGCTCTGAGTTTCAACTAAGGCAAGATTTTAGAAGAATTTTGGAT AGCCTATCTGATTTAAATGAATTAGAAACATCATATGCGTTGCAGATCTCAAAGCATTCTTTGAGATCTCTTTTGATTGGAATGGGAAGTTACCACCAAG TCTTTGATACTCTCAGCAGCAGCATATCACAGGGATTTACTGCTGGTGGGTCTAGTGATATTTTTCTCCCAGGTGACAATTATCCTTGTTGGTTTACCTA TACTAGTGAAGGACATTCTGTACTTTTTGAAGTTCCTCAGTTTAGTGATGGACATCTGAAAGGAATGATTTTGTGTGTTGTTTATTCATCCTCCCCCGGA AGCATGACCGATGAATGTCTTAGTGGTGTGTTGATTGTTAATTACACAAAGTGCTTCATCCAGCTTTACAAGCAAGACACAGTAAGTTACTTGAATGAGG ATGAGTGGCAGGGCATAGTGTCAAATTTAGCACCTCATGACAAAGTGGAGATTTGTGTAGTTTTTGGGAATAGATTGAATGTCAAAAAGACTGCACTGTA TCTTATATATGATGAACCAACAGACAGGGTGATGGAACCGTCATCGGAGCCAATGGCACTAGTCACAATGCCATCAAAGCTGGATCAGATGGAGCCAGTG ACACTAGACTAAATGTTGTCAAAGCCGGATCAGATGTAGCCAATGACGCCAATCAAAATGTTGCCGAAGCCGAATCAAACAGTGAACCAGAAAAACATAT GGTTTAGGTAACCTTTATATATATAACATGGGCTGTGGTTCAACCAAGTTCAATCAGAGAAGACTAACTAGTTACACATTCCTCTCCCCTCTCCTCTTCT CTGTATATAGTAACTGTCCACCTCTTATTAAACATTCTTTTCCTTTTCAAGAAAAAGAGGTGGAAAACGTTTTCTTTATCAAAGAAGTCTGCAAGAAAGC AAGTGTATGAGGAGTTTGCAGCTTGGCATGGGACCAGTAAGTCCAATCCAACTTTGCTGTATGTTCAAAAGAAATCACTGCTTGGTAGTAAGTTGAACCT GAGTGGTAGCTTCTTAAAATACCAGGATGATCAACTTGTGTAAATACCTTCTCTTCAAACTTGACATCCACTTCGTCTTTTTTATAAAAGAGAGATCGAG AGACGCCCTTATGCAAATTCAAGATACCAGTAAGATTTAAATTCCTACAATATCTGTGCTATCACTAGTTCTTTGCTATGCCCCCAAACTGTCATCCTGT ATATTTTTTCTGTACTCGCATAAGCATATGTAACTTGATCTATTTTGTAAGGACTGAGCATCCTATTAGTATTCTCAACTGGTTGCCATTGGTAATTGCA AATCTTATTGTTTCCATATTCCTAAAATGTCTTTTCAAGTGATGAGCACCAGTAGTTGTAATGGAGTAATGCTTATTTTTGTTAACACACATTAACTTGT ATATCTTCA
• Tissue: pods
• Gene name: LI_gene_193407;
• Additional information: details;

Expression of Ll_transcript_506813

FPKM

• PAB: 0.6
• PNAB: 1
• PS1: 0.5
• PS2: 0.2
• PS3: 0.8
• PW1: 1.2
• PW2: 1.6
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_506813

• Blastp: TMV resistance protein N from Nicotiana with 38.57% of identity
• Blastx: TMV resistance protein N from Nicotiana with 38.57% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425579.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;