| Id Trinity | TRINITY_DN52523_c0_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_505303 |
| Sequence | GCTGCCCATTCAATCAAACACGGAGCAGCTGTCCATTCAATCAGAAGTGGAGCAGCTGCCCATTCAATCAAACACGGAGCAGCTGTCCATTCAATCAGAA GTTGTTGATGTTCCTGATCCTGCTGCTGTTGCTCCACCTGCCAGCAAATCATCAATCAGGTTTCCTCTTCGTCCTGGAAAGGGCACCTTCGGCCATAAAT GTATTGTCAAGGCTAACCATTTCTTTGCTGAGCTGCCTAATAAAGATTTGCATCAATATGATGTCACAATTACCCCTGAAGTGACTTCAAGAGGAGTGAA CCGAGCTGTGATGGAACAACTTGTGAAGCTGTATCGTAATTCTCATCTTGGAAAAAGACTCCCTGCCTATGACGGCCGCAAGAGCCTGTATACTGCTGGC CCGCTTCCTTTTGTTTCAAAGGAGTTTCGTGTCTCTCTTATTGATGAAGATGATGGAACAGGAGCACAGAGGAGAGAAAGGGAGTTCAAAGTTGTGATAA AAATGGCTGCAAGGGCAGACCTTCATCATTTAGGACTCTTTCTTCAGGGGAAGCAAACTGATGCCCCTCAGGAAGCTCTGCAAGTTCTTGACATTGTCCT GCGTGAACTCCCTACTTCGAGGTACTGCCCTGTAGGAAGATCATTTTATTCCCCTGATCTTGGTAGAAGGCAACCATTAGGTGAGGGTTTGGAAAGCTGG CGTGGTTTTTATCAGAGTATCCGCCCCACTCAGATGGGACTGTCTCTTAACATTGACATGTCCTCCACTGCGTTTATTGAACCCTTGCCAGTAGTCGACT TCGTCTCTGAACTGCTGAACCGGGATGTCTGTCAGCGACCACTGTCTGATTCTGATCGTGTGAAGATAAAAAAAGCACTCCGTGGTATAAAAGTTGAAGT AACACATCGTGGAAACATGAGAAGAAAATATCGTATCTCTGGTCTTACCTCACAAGCGACAAGAGAGCTGACATTCCCTGTCGATGAGAGGGGAACGATG AAATCTGTTGTGTCGTATTTCCTTGAGACTTATGCTGTTGTTATAAAAAATACCCAGTGGCCTTGTTTGCAAGTAGGCAATACACAGAGACCAAACTATT TGCCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTACTCAAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTCAAAGTCACATGCCAGCGTCC TGTTGAGCGGGAACGTGATATTATGCAGACTGTACGTCACAATGCCTACCATGAGGACCCATATGCCAAAGAGTTCGGAATTAAAATTAGCGACAAACTC GCCCAAGTTGAAGCTCGCATCCTCCCTCCACCTCGGCTCAAATATCATGATACAGGTAGAGAAAAGGATTGTTTGCCTCAGGTTGGCCAATGGAACATGA TGAATAAGAAAATGGTCAATGGGGGAACAGTCAATCACTGGTTCTGCATAAATTTTGCAAGGAATGTTCAAGATAGTGTTGCCCGTGGTTTTTGTTTTGA ACTTGCCCAGATGTGTCAAATATCTGGCATGGCATTCAATCCAGACCCAGTGGTTCCTGCACTCAGTGCTCGCCCTGACCAAGTTGAAAAAGTTCTGAAA AATAGGCATTCTGATGCTAAGAGCAGATTGAAGGGGCAGGATCTTGATCTGCTCATTGTTATTTTGCCTGATAACAATGGCTCTCTTTATGGTGACCTCA AACGTATATGTGAGACAGATCTTGGGGTTGTTTCCCAATGTTGTTTAACAAAGCATGTTTTTAAAATGAGCAAACAGTACCTTGCGAATGTTGCTTTAAA AATTAATGTCAAGGTTGGAGGAAGGAACACTGTGCTTGTTGATGCGCTTTCACGACGCATACCCTTGGTTAGTGACAGGCCGACAATTATTTTTGGAGCT GATGTCACTCATCCACATCCTGGAGAGGATTCTAGTCCTTCGATTGCAGCTGTTGTTGCTTCTCAAGACTGGCCTGAAATTACCAAGTATGCTGGTCTGG TTTGTGCCCAAGCACATAGGCAAGAGCTTATCCAGGATCTATTTAAGCAGTGGCAAGATCCTGTCAGAGGGACTGTTACTGGAGGAATGGTCAAGGAACT TCTCATATCTTTCCGTAGGGCTACAGGGCAAAAGCCGACCCGTATCATATTTTACAGGGATGGTGTTAGCGAGGGCCAGTTTTATCAGGTTTTACTGTTT GAGCTTGATGCTATTCGGAAGGCTTGTGCATCCCTTGAGCCTAACTATCAGCCGCCTGTGACGTTTGTGGTTGTTCAGAAGCGCCATCATACAAGGCTCT TCGCAAACAACCATAATGACAGGGGTTCTATAGATAGGAGCGGGAATATATTACCTGGTACTCATTCTATAGTTTATGGTTGGTTTTCTTTTACTACCTT TCTTCACTAGCCTGCTGCATTTGAAACTACTTGGAAACCTTGCAGGAACCGTAGTTGACTCCAAAATCTGTCATCCCACTGAATTTGACTTCTATCTTTG CAGTCATGCCGGAATACAGGTGAATTTTTTCGCCATCGTTATTGTCTTTTTTTTGCCAGAAAATAATAATAATTTAATTGATTATGTATCAAAATATTAC AGGGTACCAGCCGGCCTGCTCATTACCATGTTCTGTGGGATGAGAACAATTTTTCTGCTGATGGTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_193431; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505303
| Blastp | Protein argonaute 1B from Oryza sativa with 84.15% of identity |
|---|---|
| Blastx | Protein argonaute 1B from Oryza sativa with 84.18% of identity |
| Eggnog | eukaryotic translation initiation factor 2c(ENOG410XP07) |
| Kegg | Link to kegg annotations (9270411) |
| CantataDB | Link to cantataDB annotations (CNT0002515) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431391.1) |
| Pfam | N-terminal domain of argonaute (PF16486.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |