Ll_transcript_505306

• Id Trinity: TRINITY_DN52523_c0_g1_i22
• Name Transcript: Ll_transcript_505306
• Sequence: GCTGCCCATTCAATCAAACACGGAGCAGCTGTCCATTCAATCAGAAGTGGAGCAGCTGCCCATTCAATCAAACACGGAGCAGCTGTCCATTCAATCAGAA GTTGTTGATGTTCCTGATCCTGCTGCTGTTGCTCCACCTGCCAGCAAATCATCAATCAGGTTTCCTCTTCGTCCTGGAAAGGGCACCTTCGGCCATAAAT GTATTGTCAAGGCTAACCATTTCTTTGCTGAGCTGCCTAATAAAGATTTGCATCAATATGATGTCACAATTACCCCTGAAGTGACTTCAAGAGGAGTGAA CCGAGCTGTGATGGAACAACTTGTGAAGCTGTATCGTAATTCTCATCTTGGAAAAAGACTCCCTGCCTATGACGGCCGCAAGAGCCTGTATACTGCTGGC CCGCTTCCTTTTGTTTCAAAGGAGTTTCGTGTCTCTCTTATTGATGAAGATGATGGAACAGGAGCACAGAGGAGAGAAAGGGAGTTCAAAGTTGTGATAA AAATGGCTGCAAGGGCAGACCTTCATCATTTAGGACTCTTTCTTCAGGGGAAGCAAACTGATGCCCCTCAGGAAGCTCTGCAAGTTCTTGACATTGTCCT GCGTGAACTCCCTACTTCGAGGTACTGCCCTGTAGGAAGATCATTTTATTCCCCTGATCTTGGTAGAAGGCAACCATTAGGTGAGGGTTTGGAAAGCTGG CGTGGTTTTTATCAGAGTATCCGCCCCACTCAGATGGGACTGTCTCTTAACATTGACATGTCCTCCACTGCGTTTATTGAACCCTTGCCAGTAGTCGACT TCGTCTCTGAACTGCTGAACCGGGATGTCTGTCAGCGACCACTGTCTGATTCTGATCGTGTGAAGATAAAAAAAGCACTCCGTGGTATAAAAGTTGAAGT AACACATCGTGGAAACATGAGAAGAAAATATCGTATCTCTGGTCTTACCTCACAAGCGACAAGAGAGCTGACATTCCCTGTCGATGAGAGGGGAACGATG AAATCTGTTGTGTCGTATTTCCTTGAGACTTATGCTGTTGTTATAAAAAATACCCAGTGGCCTTGTTTGCAAGTAGGCAATACACAGAGACCAAACTATT TGCCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTACTCAAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTCAAAGTCACATGCCAGCGTCC TGTTGAGAGGGAGCGTGATATCATGCAGACTGTATATCACAATGCCTACCACGAGGACCCATATGCCAAAGAGTTTGGCATTAAAATTAGTGAAAAACTT GCTCAGGTTGAAGCCCGCATTCTCCCTCCTCCTCGGCTCAAATATCATGATACAGGCAGAGAAAAAGATTGCTTGCCTCAGGTTGGCCAATGGAATATGA TGAATAAGAAAATGGTCAATGGGGGAACAGTCAATCACTGGTTCTGCATAAATTTTGCAAGGAATGTTCAAGATAGTGTTGCCCGTGGCTTTTGTTTTGA ACTTGCCCAAATGTGTCAGATATCTGGCATGGCGTTCAATCTAGATCCAGTAGTTCCCGCACTCAGTGCTCGCCCTGACCAAGTGGAGAAGGTTCTGAAA AATAGGCATTCTGATGCGAAGAGTAGACTACATGGACAGGATCTTGATCTGCTCATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGATCTCA AACGTATATGTGAGACAGATCTTGGGGTTGTTTCCCAATGTTGTTTAACAAAGCATGTATTTAAAATGAGCAAGCAGTACCTTGCAAATGTTGCCTTGAA AATTAATGTAAAGGTTGGAGGAAGGAACACTGTGCTTGTTGATGCGCTTTCACGACGCATTCCCTTGGTTAGTGACAGGCCTACAATTATTTTTGGAGCT GATGTGACTCATCCACATCCTGGAGAGGATTCCAGTCCTTCTATTGCAGCTGTTGTTGCTTCTCAAGATTGGCCTGAAGTTACCAAGTATGCTGGTCTGG TTTGTGCCCAAGCTCATAGGCAAGAGCTTATTCAGGACCTATATAAGCAGTGGCAAGATCCTGTCAGAGGGACTGTGACTGGAGGAATGATTAAAGAGCT TCTCATATCTTTCCGGAGGGCTACGGGGCAGAAGCCAACACGAATCATATTTTACAGGGATGGTGTTAGTGAGGGACAGTTTTACCAAGTTTTATTGTTT GAGCTTGATGCTATTCGGAAGGCTTGTGCATCCCTTGAGCCTAACTATCAGCCGCCTGTGACGTTTGTGGTTGTTCAGAAGCGCCATCATACAAGGCTCT TCGCAAACAACCATAATGACAGGGGTTCTATAGATAGGAGCGGGAATATATTACCTGGAACCGTAGTTGACTCCAAAATCTGTCATCCCACTGAATTTGA CTTCTATCTTTGCAGTCATGCCGGAATACAGGGTACCAGCCGGCCTGCTCATTACCATGTTCTGTGGGATGAGAACAATTTTTCTGCTGATGGTTTGCAG ACTCTGACCAACAATCTGTGCTACACTTATGCAAGGTGTACACGGTCTGTTTCAATTGTGCCTCCTGCCTATTATGCTCATCTTGCTGCATTTCGAGCTC GGTTCTACATGGAACCCGAGACTTCCGACAGCGGGTCAATGGCAAGTGGCGCTTATGCTGCAAATCGTGGAATGGGTGGGAGTGCGACTCGTAGCACTCG CGCACCTGGTCTAAATGCTGCTGTGAGACCCCTTCCTGCATTGAGGGATAATGTGAAGAAGGTCATGTTTTACTGCTAAGATGTTAGCAGTGTTCATTCA AATAAGGAGTTTGCTTTGTTGCATACTTGTGTTGTTTTGTTTATGGTGCTTTTGAAAACATCTTTAGATTTTGCATGGTGTTATTCCAGTACTGTTTTTT ATTTTCCCGAAAACATGGTATTGTGAGTGGTACTTGTGTTATGGTTGAGAATGTTGTGGTTTTTAGTTGGGTTATCTTGTGACTTGTCTGATATTTTGAG ATGGAGGTGTTGTGCACCATTGCCCTCCAATTTCTATGCTGGGTAGTTATATCTATCATATATTATTATGGTCACAAGTATCTTTTTCCTAGTTAGTCTT CTTATCTTGAAAATAATGATTGTTCTTTCTAAATGTTGAGAATTTTCATGAATCACATTTCCCATTCCATAAGCAGTTTGTGGGGTTTGAGAAAGAAGAG AAATAAGTGGAAAAGAATGAAGAAGTGTCCTAAGGATTAAGAGTTAGAAAAATGACCGCAAGTTACCCGTTCATTTGCACGGGGGCAGTATTTTTTGTTA CATGATTAAGACTGTATATTATATATATATATT
• Tissue: pods
• Gene name: LI_gene_193431;
• Additional information: details;

Expression of Ll_transcript_505306

FPKM

• PAB: 2.8
• PNAB: 12.6
• PS1: 24
• PS2: 16.7
• PS3: 27.5
• PW1: 2.2
• PW2: 3.5
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505306

• Blastp: Protein argonaute 1 from Arabidopsis with 82.35% of identity
• Blastx: Protein argonaute 1B from Oryza sativa with 84.73% of identity
• Eggnog: eukaryotic translation initiation factor 2c(ENOG410XP07)
• Kegg: Link to kegg annotations (AT1G48410)
• CantataDB: Link to cantataDB annotations (CNT0002515)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431391.1)
• Pfam: N-terminal domain of argonaute (PF16486.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;