Ll_transcript_505313

• Id Trinity: TRINITY_DN52523_c0_g1_i29
• Name Transcript: Ll_transcript_505313
• Sequence: GCTGCCCATTCAATCAAACACGGAGCAGCTGTCCATTCAATCAGAAGTGGAGCAGCTGCCCATTCAATCAAACACGGAGCAGCTGTCCATTCAATCAGAA GTTGTTGATGTTCCTGATCCTGCTGCTGTTGCTCCACCTGCCAGCAAATCATCAATCAGGTTTCCTCTTCGTCCTGGAAAGGGCACCTTCGGCCATAAAT GTATTGTCAAGGCTAACCATTTCTTTGCTGAGCTGCCTAATAAAGATTTGCATCAATATGATGTCACAATTACCCCTGAAGTGACTTCAAGAGGAGTGAA CCGAGCTGTGATGGAACAACTTGTGAAGCTGTATCGTAATTCTCATCTTGGAAAAAGACTCCCTGCCTATGACGGCCGCAAGAGCCTGTATACTGCTGGC CCGCTTCCTTTTGTTTCAAAGGAGTTTCGTGTCTCTCTTATTGATGAAGATGATGGAACAGGAGCACAGAGGAGAGAAAGGGAGTTCAAAGTTGTGATAA AAATGGCTGCAAGGGCAGACCTTCATCATTTAGGACTCTTTCTGCAGGGGAGGCAAACTGATGCCCCTCAAGAAGCTCTGCAAGTTCTTGACATTGTCCT GCGTGAACTCCCTACGAGCAGGTATTGTCCAGTAGGAAGATCATTTTATTCCCCTGATCTTGGTAGAAGGCAGCCGTTAGGTGAGGGTTTGGAAAGTTGG CGTGGTTTCTATCAAAGTATCCGTCCCACTCAGATGGGGCTCTCTCTGAACATTGATATGTCCTCCACTGCATTTATTGAGCCATTGACTGTAATCGACT TTGTAACTCAACTGCTGAACAGGGATGTCTCTCAGCGACCACTGTCTGATTCTGATCGTGTGAAGATAAAAAAGGCACTCCGGGGCATAAGAGTTGAAGT AACACACCGTGGAAACATGAGAAGAAAATATCGTATCTCGGGTCTTACCTCACAGGCTACAAGAGAGCTGACGTTCCCCGTGGATGAGATGGGAACAATG AAATCTGTTGTGGAATATTTCTTTGAGACTTATGGTTTTATCATAAAGCATACCCAGTGGCCTTGTTTGCAAGTAGGCAATACACAGAGACCAAACTATT TGCCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTACTCAAAGAGGCTGAATGAGCGGCAGATTACTGCATTGCTCAAAGTCACATGCCAGCGTCC CATTGAGAGGGAGCGTGATATTATGCAGACTGTACATCATAATGCCTACCATGAGGACCCATATGCCAAAGAGTTCGGAATTAAAATTAGCGACAAACTC GCCCAAGTTGAAGCTCGCATCCTCCCTCCACCTCGGCTCAAATATCATGATACAGGTAGAGAAAAGGATTGTTTGCCTCAGGTTGGCCAATGGAACATGA TGAATAAGGTGATTTTTTACTGTTTGATTTACATGGTGACTATTCTTGGCAAAGACAATAAATAATATTGTTCATTTTATACTCTTGCCCTTGTCCGAGT ATTCAGTTGCATACAGTATTTGTATAATGTTTTGTATTATATTTTTAGATTTAATTTTATTTCACCTGAGCTTTTTTGGGTTGGTGAATTTGGTGTGTTT TTTAGACCTATTAGCTGACATGGTGTATCAGAATTCAGAAAGGGAAGTGTTTAGTTTTTCTGACATGGCTTTTTTATCCTGAAAAGTTGTGAGTTACATT CGAATGCTGATTTTATTTTATTATTCTCTAAATAAATAAAATGTTAGTTGTTGTAGTGTGTTAGTTAGTTATTTAGTTTAGTAAAAATATAAAGTATTAG AAAAGGTTGTGAGCATTTACACACAACACATACATGAGACGTCCATGTCTTGAAAGAGTATAGTGGGTATTGCACTGAAGATATATTGTTGATTATAATA CTGACTATGATTGTTACATTATCAATTTGTGATATGTTGAAGGTTAACTTTTGTCATACGTGCTGAGTAAATATGAAAAAATCTTTTGCTGTTCATGACT TATTCAGAAAATGGTCAATGGGGGAACAGTCAATCACTGGTTCTGCATAAATTTTGCAAGGAATGTTCAAGATAGTGTTGCCCGTGG
• Tissue: pods
• Gene name: LI_gene_193431;
• Additional information: details;

Expression of Ll_transcript_505313

FPKM

• PAB: 0.6
• PNAB: 1.2
• PS1: 0.7
• PS2: 1.6
• PS3: 0.8
• PW1: 0.6
• PW2: 0.6
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505313

• Blastp: Protein argonaute 1B from Oryza sativa with 83.06% of identity
• Blastx: Protein argonaute 1B from Oryza sativa with 83.1% of identity
• Eggnog: eukaryotic translation initiation factor 2c(ENOG410XP07)
• Kegg: Link to kegg annotations (9270411)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431391.1)
• Pfam: N-terminal domain of argonaute (PF16486.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;