Ll_transcript_504829

• Id Trinity: TRINITY_DN52531_c1_g1_i13
• Name Transcript: Ll_transcript_504829
• Sequence: TGTTGATGTTGCTTTTGTATTGGTGAAATGAATTGTACACCTTTTTCATTCTGACTTTCAATACCAGCAAAGTAAATAATAATAATAATAATAATGGAAT AAAAATATAATAATTTAATAATAACGCTATTTTTATTAGTCTCTTCTTTGTGTTCTCTTTCTATTCCTCTGTTACCCACACTTCGGTTTCAATCTGAGAT CGATCTCACTCTACCCTTCACTGCCATGTCATTCGAATCCAGATCTCTTTTTCTCTTCTTCTTCCTCTTCTTCACTTTGGTCTCTGCTTCCGAATCAGAT CATAAGTATCAACAAGATGACCCAGTTACCCTTTGGGTGAACAAAGTCGGTCCTTATAACAACCCGCAAGAAACTTACAACTATTACAGCCTCCCTTTTT GTCATCCATCTAGTAGTGCTGAGGCTGCACACAAATGGGGTGGTCTTGGTGAGGTGCTTGGTGGCAATGAACTCATTGATAGCCAAATTGAGATCAAGTT CCTTAGAAATGTGGATAAAACTGTCTTTTGCCAGGTAGCTCTCGATGAGGCAAAGGTGAAACAGTTCAAGGGTGCAATAGAGAATAATTATTGGTTTGAA TTCTTCGTGGGTATGTTTTTCATTGTTTCTGTTACTTGTTATTTTAAGAACTCATAGACCTATTGCACTTGCAATAAATGTTAAAAGGTTGCAGATTTTT GTTTTTGTTTATAGCATGTGTTGCTTGGCATCAGGTAGTCAACAGCTAATTGAAATCATGGACATTTTCCCCTACCTTCCTTTGCAACCAAGACTGATAA GCTTTATTAAAAATAGACATTTACATTACATGTTCTGGTTATTCATGTCAATTGTGAAAGAATTATTAGCAGTTTATTGTTATTTTCATTATGTTGGTGT GATTGTTGATGTATGCATGGTGACATTTATCATCTGTTTAGGCATTGTACTGCTTGAAAGGAGATGCTTCTGATCCTATAATTACTATGACCAGAGGATC CATTGGGCTGAGTATTCTGTGATATTTATAGTCAATAGTCACCGGAGCTTAAAGAAGTGTGACGTTTGGAATGAAGTTTTATGTGAAGTTGTTTTTTAAG CATTCTTGAATACCTTAATGAGTGCTAATTTACTATGTTATACACTTAAAATCTGTAGAACTGAAAGAAATCTGAAATTAAGAATTATGCTTGGTGTCAT TTCTTGAGCTTTTTTTTTGTATTTCTTAAGCATTTTCCAATAATTGAATGTTAGATGATCAAAATATTATTTTGTCCTGATTCAGTTTATTGTAATATGG TGTGACTGAGCGAATTTTCTGCAGATTGCTCTCAATTGTTTATATTTAATAATTAATAAGTCATGGTTATCCTTTCCTTCCTTTTGCTGAACAAACTAAC ATTCATTTGTTATTTGCTTGATTATTCTTTTTGGCTGTGATGCGCTAAACACAAGTTCAGATGATTTACCTTTGTGGGGATATGTTGGTGAGCTTCATCC TGATAAGAATAGTGACAGTGGCAAGCATGTCCTTTACACACACAAGAACATTATTGTTAAATACAATAAGGATCAGATCATTCATGTTAATCTCACTCAG GATATTCCAAAGCCTTTGGAAGCAGGAAAACATTTGGACTTGACGTATTCTGTCAAATGGATTCCTACTAATGTCACTTTCAGACACCGCTTTGATGTCT ACCTGGACTATCCTTTCTTTGAGCATCAGATCCATTGGTTCTCCATTTTTAACTCTTTCATGATGGTCATCTTCCTTACTGGATTGGTGTCAATGATATT AATGCGAACTCTGAGAAATGACTATGCAAAATATGCCCGGGAGGATGATGATTTGGAAAGTCTGGAGAGAGATGTTAGTGAAGAATCTGGTTGGAAACTT GTGCATGGTGATGTTTTTAGGCCTCCTCGCTATTTAGTTGTTCTTTCGGCTGTTGTTGGCACAGGTGCTCAGCTAGCATTGCTGGTTCTTCTTGTCATCT TGTTAGCTATTATTGGTATGCTGTATATCGGGAGAGGAGCAATTGTCACAACCTTCATTGTCTGTTATGCTCTTACATCATTCATTTCTGGTTACGTGAG TGGGGGAATGTATTCCCGCAATGGGGGTAAAAGCTGGATTAAATCCATGATCCTTACTGCTTCTCTGTTCCCATTCCTGTGCTTTGGAATTGGATTTTTC TTAAACACAATTGCTATATTCTACGGGTCTCTAGCAGCTATCCCATTTGGCACAATGGTAGTTGTTTTTGTCATTTGGGCTTTCATCTCTTTCCCTCTAG CACTTCTTGGAACAGTTGTTGGCAGAAACTGGAGTGGCGCTCCAAACAATCCCTGTCGCGTAAAGACCATTCCCCGTCCCATTCCTGAGAAGAAGTGGTA CCTCACACCCTCTGTGGTTTCTCTGATGGGAGGACTGCTACCCTTTGGCAGCATATTCATTGAAATGTATTTCGTATTCACTTCCTTCTGGAATTACAAG GTGTACTATGTGTATGGCTTCATGCTACTGGTTTTTCTGATTCTTATGATCGTTACTGTTTGTGTGACAATTGTGGGGACATACTTTTTGTTAAATGCTG AAAACTACCACTGGCAATGGACTTCTTTCTTTTCAGCTGCCTCAACAGCTGTTTATGTGTATTTGTACTCAATATACTACTACTACGTGAAGACGAAGAT GTCAGGCTTCTTCCAAACTAGCTTCTATTTTGGATACACATTAATGTTTTCTCTTGGACTAGGAATTCTATGTGGAGCTGTGGGTTTTCTTGGTTCAAGA TTGTTTGTGAGGAGGATCTACCGAAACATCAAATGCGACTAGGGCTGTTTAATGAGTGAGACCTGAGCACTTCCATGTGTGTGGGGGAACCTAAATGTTT ACAAGTTGAATCACAGGGTTTGGAGGATGAGGGTGTATGATTTTTCTATATTGGGGTAGCCCTGAAATTTTTTCCCCAGGCTGTAATTGATTGTCCTTAT AATTTAGATAGTTAAAATGTCTGAATCATGTGGTCACTGTTTCATCTCTTTATAAATAGGTGCACATTGAAGTACTAATGTCAAATTCCCCAACATGGCT TTAGCTATTCATTCTACTTAAGAGGGGATTAAGTCTCAGAAATGAATTTTGTTTGTCTGAATTTTGTATTAGGATTTGAATATCCTCACTCTCTGCTTCC TTGACACCTATTATTGCTTGCAATTACTTTTTTACTTTTTCTTTTGCCTCTAAATATTTCAATATCTCATCATTGAAGTACAGCCATTTTAGATGGAACC TGAGAAGTGAGAACACTTACTAGTGTTCTCCTTCACATATATTGTAGTTTTAGCAAACAATAAATTTAGCACCCAGTTGACTCCTCTAATTATCTTATC
• Tissue: pods
• Gene name: LI_gene_193488;
• Additional information: details;

Expression of Ll_transcript_504829

FPKM

• PAB: 11.8
• PNAB: 30.8
• PS1: 23.5
• PS2: 21.6
• PS3: 24.6
• PW1: 19.1
• PW2: 24.6
• PW3: 18.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_504829

• Blastp: Transmembrane 9 superfamily member 1 from Arabidopsis with 94.17% of identity
• Blastx: Transmembrane 9 superfamily member 1 from Arabidopsis with 93.04% of identity
• Eggnog: transmembrane 9 superfamily member(ENOG410XSVB)
• Kegg: Link to kegg annotations (AT1G10950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464005.1)
• Pfam: Endomembrane protein 70 (PF02990.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;