| Id Trinity | TRINITY_DN52531_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_504820 |
| Sequence | AGAAATTAAACTGTAGAAGAAATATAAATTATTGCACTTTTTATATATTATATTATCTCATTTTCTTCTGTTCTTCACTCTTGTATCTCCATTTTCTCTC TTTCACACACTTCAATTTCAATTTGAGATCGATCTCACTCTACCCTTCACAGCGATGTCATTCGAATCTCGATCCCTTTTCTTCTTCTTCCTCTTCCTCA CTTTATCATTTGCTTCCGAATCTGATCACAAGTATCAACAAGACGACCCCGTTACTCTTTGGGTGAACAAAGTTGGTCCTTATAACAACCCGCAAGAAAC ATACAACTACTATAGCCTTCCATTTTGTCATCCATCTAGTAGTGCTGAGGCTGCACACAAATGGGGTGGTCTTGGTGAGGTGCTTGGTGGCAATGAACTC ATTGATAGCCAAATTGACATCAAGTTCCTAAGAAATGTGGATAAAACTGTATTTTGCCAGATAAGTCTCGACGAGGCAAAGGTGAAACAGTTCAAGGGTG CAATAGAGAATAATTATTGGTTTGAACTCTTCGTGGGTATGTTTTGCTTTTGTATCTTTTACTCACTATTCTGAGAATTCACAAAATGACTTTATGTGCG ATAAATGTTAAAAGGTTGCATATTTTTGTGTTTTTGTTTTTGTTTATGGCACATGTTTCTTGGCATCAGATAGTCAATGACTAATTCAAATGATGTGCAT TGTCTCCCTATGTCCCTTTGCAACCAAGAGTCCAAGACTGATCAACATTATTGAAAATAGACATTTATATAATTATATTACATGTTCGGATTATGCAACG ATAAAGTTGCTTGCCTTGTGACTTGGAGTTCATGAGTTCAAATCCCGGGAAACAAGCCCTTCACTTGTGAGGGTAAGGGTGTGTACATCTCCCCTTCCCA GACCCCCTAGGTGGGACCCTTGTGCATTTGGTCGCCCTTTCATTGTTATTTCATTACATGTTTATGATTTTTGATGTATGCATGATGAAATTTATCATTT CTTTTGACATTGAAAGGAGATGCATTTTGATCCTATAACTACTACTATGATGACCAGAGGATCCATTGGGCTGGGTATTTTGTGATATTTATAGTCAATG GTCACAGAAGCTGGAAGAATTATGATGTTAGAAATGAAGTCTTTATATGAAGTTTTTTATAAGCATTAATGAATACCTTAATGAATGTTAGTGTAGTGTT TTATACTTATAATCTGTAGAACTGAAAGAAGTATGAAATTAAGAATTCTTTGTGACGTGATTTCTTAAGCAATTTTCAGTAACTGAATTTTAGATGATCA ATATTATTTTGTTTTGATTTAGTTGATTATTATATGGTGTGACTGATTGTTTTTCTGCAGGTTGCTCTTAATTGTTTTTATTTAGTAATTAATCATTAAT AATAATTCATGGTATTCTTTCCTTTATTTTGCTGAACAAACTAACGTTGATTTGTTGTTTGCTTGGTTATTTCTTTTGGTTGTGATGTGCTAAACGCAAG TTCAGATGATCTACCTTTGTGGGGATATGTTGGTGAGCTACATCCTGATAAGAATAGTGATAGTGGCAAGCATGTCCTTTACACACACAAGAACATTATT GTTAAATACAATAAAGATCAGATTATTCATGTTAATCTCACTCAGGATATCCCAAAGCCTCTGGAAGCCGGAAAACATTTGGACTTGACATATTCTGTCA AATGGATTCCTACTAATGTCACTTTCAGACACCGCTTTGATGTCTACCTGGACTATCCTTTCTTTGAGCATCAGATCCATTGGTTCTCCATTTTTAACTC TTTCATGATGGTTATCTTTCTTACTGGATTGGTGTCGATGATATTAATGCGAACTCTGAGAAATGACTATGCAAAATATGCTCGGGAGGATGATGATTTG GAAACTCTGGAGAGAGATGTTAGTGAAGAATCTGGTTGGAAACTTGTGCATGGTGATGTTTTTAGGCCTCCTCGCTATTTAGTTGTTCTTTCGGCTGTTG TTGGCACAGGTGCTCAGCTAGCATTGCTGGTTCTTCTTGTCATCTTGTTAGCTATTATTGGTATGCTGTATATCGGGAGAGGAGCAATTGTCACAACCTT CATTGTCTGTTATGCTCTTACATCATTCATTTCTGGTTACGTGAGTGGGGGAATGTATTCCCGCAATGGGGGTAAAAGCTGGATTAAATCCATGATCCTT ACTGCTTCTCTGTTCCCATTCCTGTGCTTTGGAATTGGATTTTTCTTAAACACAATTGCTATATTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_193488; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_504820
| Blastp | Transmembrane 9 superfamily member 1 from Arabidopsis with 90.26% of identity |
|---|---|
| Blastx | Transmembrane 9 superfamily member 1 from Arabidopsis with 89.76% of identity |
| Eggnog | transmembrane 9 superfamily member(ENOG410XSVB) |
| Kegg | Link to kegg annotations (AT1G10950) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464006.1) |
| Pfam | Endomembrane protein 70 (PF02990.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |