| Id Trinity | TRINITY_DN52534_c3_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_507380 |
| Sequence | CTCACTGAGTCTGGGCAAATAACCCTATCTACCAACCTCTCCCTCTTCAAATTATTTCTTCTTTCAAATTTCACATAACGTACAATAATCTGCTTAATTG CATAAACTCTTTCAATTGGATCCACAACACCAACTAGTTAGAAAAAGATTTAGAAAGGAATCTTAATTTGTTGAAATGGCATCACGAAGATATGCTTTTG GAAGAGTAGATGAGGTTACTCACCCAGACTCAGTGAGAGCCACCATAGCTGAATTCATCTCTACTTTCATCTTTGTTTTTGCTGGAGAAGGCTCTATCCT TGCTCTTGGTCCCTAACCCTTAAAAAACTCTTCAATCACTCTAATAACTTATTTATTTTATACCTAACTTTATATCTTAATAATTTATCTTTGCTTTGCT TATTTTGTAGACAAAATATACAAGTTAAGAGGTTCATCAGCAAGTGAGTTAGTGGTAATTGCACTAGCACATGCATTTAGTCTCTTTGCTGCAATATCAG CTAGCATGCATGTATCAGGTGGGCATGTGAATCCTGCAGTGACATTTGGTGCTCTTCTTGGTGGAAGGATCTCAGTTCTTAGAGCTGTGTATTACTGGAT TGCTCAACTTCTGGGTTCTATTCTGGCTGCTCTCTTGTTGAGGCTTGGTACTAACAACATGGTAAACTAATAATCCCATCTTTCTCTTTCCTTCATAGCT ATTAGATACATAGATGGATACATAAATGATATCATTTAATTAACTTCAACAATTTTTTGAATAAAAGAACCCATATAGTATTATGGATGACAATATTATC CCAATAAAGAATGGAAAGTAATTGAAGTAGAAGTTTCAGATTCATGAAATCTATATTTCAGAGATCACTCTGAAACCTTTTATTTTTCATTGATTCCCAC CTAAACCCAACTATTATTTTTATTATTTTCTGTTCTTGATAATATATAATTTTATAATTATATAGAATATAAATAATAAATCTAAATATTATATATTCTA TTTTTAATAATGAGTGAGTTTTCAATGATTATAAGTTTATTCCATACAGCATCAAACTAGCTCCTTATGCGAAAACATATAGACAGTCATTTTATTTCAT TTAGGATAGGGGTAATTACCTATCTCTCATTATTTGATAAATAGTTGGATAAATAGTTGATTATCGTGTACATGATATTTTTTCTTTTAAGGAGAGATAA AGTCACCTTAGTAACGTACTTGGTGAACACAAAAAATAAACAAGTCTTCCATGAAAGAACTAATTAATTATAAAGTAATACTATAATTTCTGCCAAATAA ATTGTAATTTTACCATTCATTTTAATTTTCCTTTAGATAAACTAGATTCATCGGTCTATGTGATATAAATTAAAGATGGCACACTATCTAATTTTACTAA ATAGATGTCTTTTTTGGAAAATTCCTATGCTTATAGTGAAATGCAGCAAGGCCCACTTACCCTTTCTTTATAAAGTGGACAGAGAAAGTGTAAAAATACC ATTTTTTTTAGAATATGAAAGTGGTAGTCTTTATTTTTTCCTCTAGAGAACTGAAAAATTGAGGAACTAAAATTGAAGTAACCATGGATGGTTTTGTGGC TTGCCCATTGTAGAGACCAGAGTCATTCCATGTATCAGTGGGTGTTGGTGCTGCACATGGCCTTGTACTTGAGATTGCCATGACATTTGGTCTAATGTAC ATTGTCTATGCTACTGCAATTGATCCCAAAAGGGGCCCAATTGGGTCACTTGCACCTTTAGCCATTGGGCTCCTTGTTGGGGCAAATATCCTCCTTGGTG GACCATTTGATGGAGGATGCATGAACCCTGCTCGGGCTTTTGGGCCTGCTTTGGTGGGCTGGAGATGGAAGTACCATTGGGTCTTCTGGGTAGGCCCATT GATTGGGGCAGCCCTTGCAGCACTCATATATGAGTATGTTATGGTCCCAACTGAGCCTCCTCATAATCACCAACCTTTGGCTCCTGAAGATTACTAGTTT GGTTACTTGGTATATTTATATATATCATGGAAAAATATGCATATGTTTATTTTAATTCTCACTTTCCTAAGTTGTCTATGAGCTTATTATATTTGTATGC ATATCATGAGTGTGTAGCTTTTGTTCTATGTATTTGTTGAATAAAGTGGGAACCTTATCACTTCTATGTAAACAATCTTGGAGTCTTGTAAGAAAAGAAC AATGTTGGGAGGCCTTTCCTGATTAATAATCTTTATAATATGACAAAATATGTAAAAGGAATGGTAACAAACGTAAATATATGAATTGTATAATGAAGAA TTTTGCTGTCACTTTTTTTTTTATACTATTAAAAGTATCATTTCATATTTTAGCTAAGAAGCCAGCTCCTTTCGAGATTTGGGATTTGTGGTTGCTCTTC TTATCAATTTGAATATCTTTTTATTCCCAATATAATAAAAAATACATTTAAGAGGGGCTTTCTATCCACTGTTTTCATGAAACTATTAATTATGCAATAT TTTGCACCTAAAATATTGCGACTCAGGATAAATGAAGTTGAGAGGTTTTAAAGGGTTGATTTGTCATTACCTTTGTATGAACTTTTTTTTATGTACCAAA AAAAGGGTTGATACTTGGAAGGGTAATGACAAAGGGTAGGTTCCCTAAAAGCAAAATAAGAAATGGGTGAGGATAATATCATGTAATTTAATGGAGTACC AAACTACAAATATCAGCATGAACTTGTGTCCTCATCAAAAAGTCCTATTAATTGAACAAACCTTCGTTAGCAAGGAATATCCTAAATAATTGACCAAATT AGCTCAAGGAGAGCCTGAGTTTGTAACATTTTACCTATTGAAACCAATAATAACTACCCACATTGACTTGGATGCTTATCTACCACAAATATTTAGTTGC TCCCCTGAAATTGTTAGATTAGTAGTATTTCAACATGTGTTGTAAATCAAAGTTGTAATTCAAGTTAGTTGAACCTTTCCATGTATAGTAAGTTTAGATT TGAAAAGTAGTTGGTAGTTGAGTAGAGTTACTATATATAGAAAGGTAGTGTATTTTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_193517; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507380
| Blastp | Probable aquaporin TIP3-2 from Arabidopsis with 75.23% of identity |
|---|---|
| Blastx | Probable aquaporin TIP3-2 from Arabidopsis with 71.76% of identity |
| Eggnog | Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)(COG0580) |
| Kegg | Link to kegg annotations (AT1G17810) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429778.1) |
| Pfam | Major intrinsic protein (PF00230.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |