| Id Trinity | TRINITY_DN52534_c3_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_507381 |
| Sequence | CTCACTGAGTCTGGGCAAATAACCCTATCTACCAACCTCTCCCTCTTCAAATTATTTCTTCTTTCAAATTTCACATAACGTACAATAATCTGCTTAATTG CATAAACTCTTTCAATTGGATCCACAACACCAACTAGTTAGAAAAAGATTTAGAAAGGAATCTTAATTTGTTGAAATGGCATCACGAAGATATGCTTTTG GAAGAGTAGATGAGGTTACTCACCCAGACTCAGTGAGAGCCACCATAGCTGAATTCATCTCTACTTTCATCTTTGTTTTTGCTGGAGAAGGCTCTATCCT TGCTCTTGACAAAATATACAAGTTAAGAGGTTCATCAGCAAGTGAGTTAGTGGTAATTGCACTAGCACATGCATTTAGTCTCTTTGCTGCAATATCAGCT AGCATGCATGTATCAGGTGGGCATGTGAATCCTGCAGTGACATTTGGTGCTCTTCTTGGTGGAAGGATCTCAGTTCTTAGAGCTGTGTATTACTGGATTG CTCAACTTCTGGGTTCTATTCTGGCTGCTCTCTTGTTGAGGCTTGGTACTAACAACATGGTAAACTAATAATCCCATCTTTCTCTTTCCTTCATAGCTAT TAGATACATAGATGGATACATAAATGATATCATTTAATTAACTTCAACAATTTTTTGAATAAAAGAACCCATATAGTATTATGGATGACAATATTATCCC AATAAAGAATGGAAAGTAATTGAAGTAGAAGTTTCAGATTCATGAAATCTATATTTCAGAGATCACTCTGAAACCTTTTATTTTTCATTGATTCCCACCT AAACCCAACTATTATTTTTATTATTTTCTGTTCTTGATAATATATAATTTTATAATTATATAGAATATAAATAATAAATCTAAATATTATATATTCTATT TTTAATAATGAGTGAGTTTTCAATGATTATAAGTTTATTCCATACAGCATCAAACTAGCTCCTTATGCGAAAACATATAGACAGTCATTTTATTTCATTT AGGATAGGGGTAATTACCTATCTCTCATTATTTGATAAATAGTTGGATAAATAGTTGATTATCGTGTACATGATATTTTTTCTTTTAAGGAGAGATAAAG TCACCTTAGTAACGTACTTGGTGAACACAAAAAATAAACAAGTCTTCCATGAAAGAACTAATTAATTATAAAGTAATACTATAATTTCTGCCAAATAAAT TGTAATTTTACCATTCATTTTAATTTTCCTTTAGATAAACTAGATTCATCGGTCTATGTGATATAAATTAAAGATGGCACACTATCTAATTTTACTAAAT AGATGTCTTTTTTGGAAAATTCCTATGCTTATAGTGAAATGCAGCAAGGCCCACTTACCCTTTCTTTATAAAGTGGACAGAGAAAGTGTAAAAATACCAT TTTTTTTAGAATATGAAAGTGGTAGTCTTTATTTTTTCCTCTAGAGAACTGAAAAATTGAGGAACTAAAATTGAAGTAACCATGGATGGTTTTGTGGCTT GCCCATTGTAGAGACCAGAGTCATTCCATGTATCAGTGGGTGTTGGTGCTGCACATGGCCTTGTACTTGAGATTGCCATGACATTTGGTCTAATGTACAT TGTCTATGCTACTGCAATTGATCCCAAAAGGGGCCCAATTGGGTCACTTGCACCTTTAGCCATTGGGCTCCTTGTTGGGGCAAATATCCTCCTTGGTGGA CCATTTGATGGAGGATGCATGAACCCTGCTCGGGCTTTTGGGCCTGCTTTGGTGGGCTGGAGATGGAAGTACCATTGGGTCTTCTGGGTAGGCCCATTGA TTGGGGCAGCCCTTGCAGCACTCATATATGAGTATGTTATGGTCCCAACTGAGCCTCCTCATAATCACCAACCTTTGGCTCCTGAAGATTACTAGTTTGG TTACTTGGTATATTTATATATATCATGGAAAAATATGCATATGTTTATTTTAATTCTCACTTTCCTAAGTTGTCTATGAGCTTATTATATTTGTATGCAT ATCATGAGTGTGTAGCTTTTGTTCTATGTATTTGTTGAATAAAGTGGGAACCTTATCACTTCTATGTAAACAATCTTGGAGTCTTGTAAGAAAAGAACAA TGTTGGGAGGCCTTTCCTGATTAATAATCTTTATAATATGACAAAATATGTAAAAGGAATGGTAACAAACGTAAATATATGAATTGTATAATGAAGAATT TTGCTGTCACTTTTTTTTTTATACTATTAAAAGTATCATTTCATATTTTAGCTAAGAAGCCAGCTCCTTTCGAGATTTGGGATTTGTGGTTGCTCTTCTT ATCAATTTGAATATCTTTTTATTCCCAATATAATAAAAAATACATTTAAGAGGGGCTTTCTATCCACTGTTTTCATGAAACTATTAATTATGCAATATTT TGCACCTAAAATATTGCGACTCAGGATAAATGAAGTTGAGAGGTTTTAAAGGGTTGATTTGTCATTACCTTTGTATGAACTTTTTTTTATGTACCAAAAA AAGGGTTGATACTTGGAAGGGTAATGACAAAGGGTAGGTTCCCTAAAAGCAAAATAAGAAATGGGTGAGGATAATATCATGTAATTTAATGGAGTACCAA ACTACAAATATCAGCATGAACTTGTGTCCTCATCAAAAAGTCCTATTAATTGAACAAACCTTCGTTAGCAAGGAATATCCTAAATAATTGACCAAATTAG CTCAAGGAGAGCCTGAGTTTGTAACATTTTACCTATTGAAACCAATAATAACTACCCACATTGACTTGGATGCTTATCTACCACAAATATTTAGTTGCTC CCCTGAAATTGTTAGATTAGTAGTATTTCAACATGTGTTGTAAATCAAAGTTGTAATTCAAGTTAGTTGAACCTTTCCATGTATAGTAAGTTTAGATTTG AAAAGTAGTTGGTAGTTGAGTAGAGTTACTATATATAGAAAGGTAGTGTATTTTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_193517; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507381
| Blastp | Probable aquaporin TIP-type alpha from Phaseolus with 78.91% of identity |
|---|---|
| Blastx | Probable aquaporin TIP3-2 from Arabidopsis with 71.76% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429778.1) |
| Pfam | Major intrinsic protein (PF00230.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |