Id Trinity | TRINITY_DN52535_c0_g1_i15 |
---|---|
Name Transcript | Ll_transcript_505175 |
Sequence | CGAAGTACTTGTAAATTTTGCAATTTAGACAAAGAAAATTGTTGTCTCATGTTTTAAGATTTTATTTTCTCTCTCTCTCCAAACATTTTTCTCACTCCAA GTTTCTCTCTCACTCTCAGATTTGGTAATATAGGGTATTGGAAGGGAGTGTAAATGCAGAGGAAAACAATGGACACAATAAGTAACAGTATGGGGAAAAG GTCACTGGAAGGTGGTGGAGAAGATGACCAGCCTGAAAGAAAAAGGCCTACTCTTGCCAATGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAA CTCTGCTCATCGTTAGAACCTATTCTTCGTCGAGTTGTAAGACATCTGGCTTCACACTGCTTCTACTATTTAGTTTTCTTTGCGATGTGCTATTTTGAAG AGAGAAGGTTATCATTTCTTCACTGCTTTATACTATTAGTTTTCAAATTCTTATTTTCAAGAGAAAACTATATCATTTCACACTGCAGGACATCTGTTAG GCAATTTGATGGTGTTGGAGTGTTATGGCTTGTGTGTGAATACCCCCTGCCTATTTGTAAAGAGTCGTATTGTTTAACCAATAAATTAAGCTGCATACTA ATTTTGCTTACCTATGCAAACCTAGTGTTCACAGTGGATTGAATGTCCATTTTTCGTTCAGTGTTCCATTTAACTCCATCCTTTTCTTTCCGTGTTCCAT TTAACTCCATCCTTTTCTTTCCGTGTCCAATGTTCCATATGTGATCAAGAGAAGAGATGATACCATATTCATAGAAATTATACTACTATAATATGTTGGG CAATTCTATATACACCCAAAAACCATTGCTTACACCCAAACGGATGGTCCATCCGTGTGGGTTTAAGCACTGATTTCTTGGGCGTTGATAGAATTTCCCT AATGTTTTTAGTTCTTTATGACTTCAAGTTCTGCTTTTGATCCTTTTTTCTGGGTACGCATTTCTGCATTTAGTTCTTAATTAGTTTTATGATACTGATG TGAACAGGTAAGTGAAGAAGTGGAGCGTGCTCTGGCAAAGTTAGGTCCTGCAAGACTTAGTGGAAGGTTTAAGAAAGTCTTCACGTTTCAATAAAATTAG TTCATGAATATTTATAGTTTAGTAACATTCCATATTATAACTATATGCTTTTTATGTATTGTCTGTAGACCTAGCAAATACAGAAATGGATCTGTTAAGG TAACAGATATTAGTTCACTGTCAACATTTGAGTTTCGAGCCCCCTTTTTAGTATAGTAGATTTCGTGGTGTAAATTATTAGGTGGTCTTGAAGTGCATGA CTTTATGGATCCTGGATGGAAAAAATATATACTCTCTGGAAGTTATCTTATGGTTTTTGTTCGTAGTTTCAAGGAATAGGATAATGAATAATATGCGGTG CAATAGGGATGACTGTGCATCTGATTAAACTATTCAAATTTAAAAAGCATTCATACTACTGGATGGTTTTTAAAGGATAATGAAGAATGCTTTATTTTTT GATGGGATAAAAGAATTCACTGTAAAGGAAGAGAGAATACAAAGATAGAGGATTACTAATCCTCACAATCCTCTTAAAAGAACCCAACTAACAATGAAGC GAAGAAAGTAATCATGGCAGGCAATATCTATTGCCAAATATTACAGCATTAAGCTCTAATCATTTGCACAATTGCACCTCACCCTTGCTTTATGAGTGCA TTTCCACAAGACCTTATATCTTTTTCTTTTATTCCAAAGCCATGAAACTGAACAAGAAAATTACATATTTTTGTTACAGAAATCATTTGAAATGCTTAGC TCCTTGGAGGATCTAATGGGATGATAGTGTAGTATGGTGGTAATGATTTCATTCAGTTTGTGATAATCCCCCTTGTATTTAGTTTTACTGTAGGCTATAT GTCTGACCGCAGTAAGCATTGGGTTTTAATAAGCATTTTGAAATGTTGAGGTACTTTATGTGATCCATCTTCATCTGAAACTTGTAAATGAAGTACGGTT ATTTTTTTTGTTCTGCTTCCTAGGTTCATTGAGGTGTCAGATAAAAATATTGTTAACTAGCTAAAGTATGTTCTTTCATAGATGTGTTACTTTGCATACT GTGTCTGTATGGGTTGTGGAGAATGGTTACCGTTCTGGTTCAGTCTTATTTTTTTGTCTTTGAGAAAGTTACATAGTAACATTTCCATTCACCTTTCTTC TAATATATTAGTCCATCGGTCCTTTCTATAGTTGAGACTGGTATTTCCTATATCTACATTATGTCACTAATCCCACTTTAATGGCACCATAATTTTCTTA TATTTATGTTATGCACCTCAAGTTGAGACTGGGATTTAATTCCATCAGTACAAAAATTTCAGGTCTTCCCCAAAAATGATTGAAGGTCCGGATGGTAGAA ACTTACGGCTGCATTTTAGGTCTAGACTGTCTCTTCCCCTATTCACTGGAGGGAAAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTTTTAGTTGA TGCCGATAATGAAAATGTTGTAATAACTGGACCTGAAGCCTCCGTGAAACTTGATGTTGTTGTCCTTGAAGGCGATTTTAATAATGAAGATGATGAAGAC TGGACTCAAGAAGAATTTGAAAGCCATGTGGTGAAAGAACGTGAAGGAAAGAGACCTTTATTAACTGGGGAGTTGCAAGTGACTCTCAAGGAAGGAATTG GAACATTAGGGGAACTAACTTTTACAGACAATTCAAGCTGGATAAGGAGCCGGAAATTCAGGCTTGGCTTGAAGGTTGCACCAGGTTTTTGCGAGTCCAT ACGCATTCGTGAAGCTAAGACAGATGCTTTCACTGTTAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCTCCTGCTTTGAGTGATGAAGTTTGG AGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATAATGCTGGAATATTCACAGTTCAAGAATTCCTTCGGCTTGTGGTTAAAGATT CACAAAAATTGCGGAATATCCTTGGGAATGGTATGTCAAACAAGATGTGGGAAGTGCTCCTAGATCATGCAAAGACCTGTGCCCTAACTGGGAAGCTTTA TGTTTATTATCCAGAAGATACGAGAATTGTTGGTGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATAACAGGAGAACAATTCTTTTCCGTTGAT TCGCTCACTGATAGCCAGAAGGTTTATGTAGATTCTTTGGTGAAGAAGGCATATGAAAATTGGGATCAGGTTATAGAGTATGAAGGTAAATCACTCGCAA GTCTTAGGGAAAATAATGTTATAGCTGACAGTGAATTTCGTATTGAGTCGATGGATTACTCTAGTGGTTTGGATCATCAATTGCGTCTGCCACTCCCCCC AGCACCTGTTCCTTCTGAACAGCAAATTAATTCAGGGATGTTAATTGGAGGTTATAATGATCATATGGTAACAAGATATCCAAGCCAGTCACTGATAGAA AATCTCAACTCACGTAACCAGTTTGATAGCTCTCTATATCTATCTAATGACCAATTAATCAACAGTGCCCAGCAAACCAAAACCACTAGAAATGCTCATG GTGCAGGTCTTGGTCCTCCTCAATCATCATCTTCCTCTTCATCCTCATCATCACCAGGGTTTCATGTTGGCAGCACTTCTACGCAATCATCTACTGTAAA TCCTTTTGACGATTGGTCACACAACATGGACAAGGGGGTCAATGAATTCTTTTCAGAGGATGAAATCCGTGTCAGAAGTAATGAGATGCTAGAAAATGAA GATATGCAGCACTTCCTTCGCCTCCTCAGCATGGGAGCCAATTCGTCCGTGAATGCTGAGGATAGTTATTCATTCCCATCATTCATGCCATCACCTATGC CAAACTTTGATGAGGGTCACTCTCGTTCAGGCAGAGCTGTTGTGGGATGGCTAAAGATCAAGGCAGCAATGAGGTGGGGCTTTTTTATCCGGAAGATTGC AGCTGCAAAGCGGGCACAAATAGAGGAGTTAGACGAGTAAGTCATTTGGACAATCACTGCTGGCTTAATAGGTAGCCTTAAGATTTGACTTATGTGCTGC AAATTTAGTTGTCTTCACCAATTACAACCAGATTGTGCAGTCCATAGGTATTGACATTCTTAGTGATGCATCTGTGTATCTAATTTTGCTGCAAGTTTGT ACCCTACAGTATCCTGTACAGTGGTTTGATGCTTAGAAAAACTGTTATTGTTATTTGTTTTTCACTTTCCTCTTAATGCTCCGTTGTCATTCGATTGATG TACATGAATTGTGATCTACTTAATTTTTGAGTAGTATTGTGTTTTCATCTTCTGTGGATTGCTTTCTTATATCAGCATCTTAATGAGCTATTGAACATTG GGTGCTGGTTACTGTTAGTTGGACACAGTTGTTGTCTTTGCTAAATAAAGCGGTTGTAATTTTTATTTTGGAAATGAATGTCACTAAAGTTTAGAGTTAA A BLAST |
Tissue | pods |
Gene name | LI_gene_193520; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505175
Blastp | Calmodulin-binding protein 60 B from Arabidopsis with 61.74% of identity |
---|---|
Blastx | Calmodulin-binding protein 60 B from Arabidopsis with 61.66% of identity |
Eggnog | calmodulin binding protein(ENOG4111EYI) |
Kegg | Link to kegg annotations (AT5G57580) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454106.1) |
Pfam | Calmodulin binding protein-like (PF07887.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |