Id Trinity | TRINITY_DN52535_c0_g1_i24 |
---|---|
Name Transcript | Ll_transcript_505185 |
Sequence | CGAAGTACTTGTAAATTTTGCAATTTAGACAAAGAAAATTGTTGTCTCATGTTTTAAGATTTTATTTTCTCTCTCTCTCCAAACATTTTTCTCACTCCAA GTTTCTCTCTCACTCTCAGATTTGGTAATATAGGGTATTGGAAGGGAGTGTAAATGCAGAGGAAAACAATGGACACAATAAGTAACAGTATGGGGAAAAG GTCACTGGAAGGTGGTGGAGAAGATGACCAGCCTGAAAGAAAAAGGCCTACTCTTGCCAATGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAA CTCTGCTCATCGTTAGAACCTATTCTTCGTCGAGTTGTAAGACATCTGGCTTCACACTGCTTCTACTATTTAGTTTTCTTTGCGATGTGCTATTTTGAAG AGAGAAGGTTATCATTTCTTCACTGCTTTATACTATTAGTTTTCAAATTCTTATTTTCAAGAGAAAACTATATCATTTCACACTGCAGGACATCTGTTAG GCAATTTGATGGTGTTGGAGTGTTATGGCTTGTGTGTGAATACCCCCTGCCTATTTGTAAAGAGTCGTATTGTTTAACCAATAAATTAAGCTGCATACTA ATTTTGCTTACCTATGCAAACCTAGTGTTCACAGTGGATTGAATGTCCATTTTTCGTTCAGTGTTCCATTTAACTCCATCCTTTTCTTTCCGTGTTCCAT TTAACTCCATCCTTTTCTTTCCGTGTCCAATGTTCCATATGTGATCAAGAGAAGAGATGATACCATATTCATAGAAATTATACTACTATAATATGTTGGG CAATTCTATATACACCCAAAAACCATTGCTTACACCCAAACGGATGGTCCATCCGTGTGGGTTTAAGCACTGATTTCTTGGGCGTTGATAGAATTTCCCT AATGTTTTTAGTTCTTTATGACTTCAAGTTCTGCTTTTGATCCTTTTTTCTGGGTACGCATTTCTGCATTTAGTTCTTAATTAGTTTTATGATACTGATG TGAACAGGTAAGTGAAGAAGTGGAGCGTGCTCTGGCAAAGTTAGGTCCTGCAAGACTTAGTGGAAGGTTTAAGAAAGTCTTCACGTTTCAATAAAATTAG TTCATGAATATTTATAGTTTAGTAACATTCCATATTATAACTATATGCTTTTTATGTATTGTCTGTAGACCTAGCAAATACAGAAATGGATCTGTTAAGG TAACAGATATTAGTTCACTGTCAACATTTGAGTTTCGAGCCCCCTTTTTAGTATAGTAGATTTCGTGGTGTAAATTATTAGGTGGTCTTGAAGTGCATGA CTTTATGGATCCTGGATGGAAAAAATATATACTCTCTGGAAGTTATCTTATGGTTTTTGTTCGTAGTTTCAAGGAATAGGATAATGAATAATATGCGGTG CAATAGGGATGACTGTGCATCTGATTAAACTATTCAAATTTAAAAAGCATTCATACTACTGGATGGTTTTTAAAGGATAATGAAGAATGCTTTATTTTTT GATGGGATAAAAGAATTCACTGTAAAGGAAGAGAGAATACAAAGATAGAGGATTACTAATCCTCACAATCCTCTTAAAAGAACCCAACTAACAATGAAGC GAAGAAAGTAATCATGGCAGGCAATATCTATTGCCAAATATTACAGCATTAAGCTCTAATCATTTGCACAATTGCACCTCACCCTTGCTTTATGAGTGCA TTTCCACAAGACCTTATATCTTTTTCTTTTATTCCAAAGCCATGAAACTGAACAAGAAAATTACATATTTTTGTTACAGAAATCATTTGAAATGCTTAGC TCCTTGGAGGATCTAATGGGATGATAGTGTAGTATGGTGGTAATGATTTCATTCAGTTTGTGATAATCCCCCTTGTATTTAGTTTTACTGTAGGCTATAT GTCTGACCGCAGTAAGCATTGGGTTTTAATAAGCATTTTGAAATGTTGAGGTACTTTATGTGATCCATCTTCATCTGAAACTTGTAAATGAAGTACGGTT ATTTTTTTTGTTCTGCTTCCTAGGTTCATTGAGGTGTCAGATAAAAATATTGTTAACTAGCTAAAGTATGTTCTTTCATAGATGTGTTACTTTGCATACT GTGTCTGTATGGGTTGTGGAGAATGGTTACCGTTCTGGTTCAGTCTTATTTTTTTGTCTTTGAGAAAGTTACATAGTAACATTTCCATTCACCTTTCTTC TAATATATTAGTCCATCGGTCCTTTCTATAGTTGAGACTGGTATTTCCTATATCTACATTATGTCACTAATCCCACTTTAATGGCACCATAATTTTCTTA TATTTATGTTATGCACCTCAAGTTGAGACTGGGATTTAATTCCATCAGTACAAAAATTTCAGGTCTTCCCCAAAAATGATTGAAGGTCCGGATGGTAGAA ACTTACGGCTGCATTTTAGGTCTAGACTGTCTCTTCCCCTATTCACTGGAGGGAAAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTTTTAGTTGA TGCCGATAATGAAAATGTTGTAATAACTGGACCTGAAGCCTCCGTGAAACTTGATGTTGTTGTCCTTGAAGGCGATTTTAATAATGAAGATGATGAAGAC TGGACTCAAGAAGAATTTGAAAGCCATGTGGTGAAAGAACGTGAAGGAAAGAGACCTTTATTAACTGGGGAGTTGCAAGTGACTCTCAAGGAAGGAATTG GAACATTAGGGGAACTAACTTTTACAGACAATTCAAGCTGGATAAGGAGCCGGAAATTCAGGCTTGGCTTGAAGGTTGCACCAGGTTTTTGCGAGTCCAT ACGCATTCGTGAAGCTAAGACAGATGCTTTCACTGTTAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCTCCTGCTTTGAGTGATGAAGTTTGG AGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATAATGCTGGAATATTCACAGTTCAAGAATTCCTTCGGCTTGTGGTTAAAGATT CACAAAAATTGCGGAATATCCTTGGGAATGGTATGTCAAACAAGATGTGGGAAGTGCTCCTAGATCATGCAAAGACCTGTGCCCTAACTGGGAAGCTTTA TGTTTATTATCCAGAAGATACGAGAATTGTTGGTGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATAACAGGAGAACAATTCTTTTCCGTTGAT TCGCTCACTGATAGCCAGAAGGTTTATGTAGATTCTTTGGTGAAGAAGGCATATGAAAATTGGGATCAGGTTATAGAGTATGAAGGTAAATCACTCGCAA GTCTTAGGGAAAATAATGTTATAGCTGACAGTGAATTTCGTATTGAGTCGATGGATTACTCTAGTGGTTTGGATCATCAATTGCGTCTGCCACTCCCCCC AGCACCTGTTCCTTCTGAACAGCAAATTAATTCAGGGATGTTAATTGGAGGTTATAATGATCATATGGTAACAAGATATCCAAGCCAGTCACTGATAGAA AATCTCAACTCACGTAACCAGTTTGATAGCTCTCTATATCTATCTAATGACCAATTAATCAACAGTGCCCAGCAAACCAAAACCACTAGAAATGCTCATG GTGCAGGTCTTGGTCCTCCTCAATCATCATCTTCCTCTTCATCCTCATCATCACCAGGGTTTCATGTTGGCAGCACTTCTACGCAATCATCTACTGTAAA TCCTTTTGACGATTGGTCACACAACATGGACAAGGGGGTCAATGAATTCTTTTCAGAGGATGAAATCCGCCTCAGAAGTCACGAGATGCTAGAAAATGAA GATATGCAGCACTTGCTTCGCCTCTTCAGCATGGGAGGTAATTCCTCCATGAATGCTGGGGACGGCTATTCAATCCCATCATTCATGCCATCACCTATGC CGAACTTCGATGGGGATCGCTCTCGTTCAGGCAGAGCTGTTGTGGGATGGCTAAAGATCAAGGCAGCAATGAGGTGGGGCTTTTTTATCAGGAAGATAGC AGCTGAGAAGCGGGCACAGATAGAGGAGTTAGATGAATAAGTCATTTGGACAAATGATTTCGGGGTGAATAGGTAGCCTTAAGATTTTACACACAAGTTC TGCAAATTTAGTTTGTCTTCATCGGTGCAACCAAATTGTGCAGTCCGTGGGTGTTGACATTCATAGTGATGCATCTGTGTATCTGATTTTACTGCAAGTT TGTACAGTACAATATCCTGTACAGTACAATATCCTGTACAGTGTTTTGATGCTTAGGAAAAACCTGGATTGTTATTTGTTTTTCACCTTTGTGCTAATGC TCCTTTGTTATCACCTTTCCATTGGTTCTGGAGCACATGTCCTGTCAGATGATAACTTAGATTTGTCATCTCACTTGATTGATGTATATGAATTATGATC TACTTAAGTTTCTAGTTGTATTGTATGTTACTATCATCGTCGTTATCATCTTCATTTTTTAATTTCGGTATCTTAATGAGTTGACTCAGAACATGAACCT CTTAACAATACTTCACCGCTCATGCATAACAGCTATGCAGATTTATCATTTTATGTATCAGTATCTGGTGTTGGGTTGTATTTATTGTGTTTCCCGTGTG AATGAA BLAST |
Tissue | pods |
Gene name | LI_gene_193520; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505185
Blastp | Calmodulin-binding protein 60 B from Arabidopsis with 62.46% of identity |
---|---|
Blastx | Calmodulin-binding protein 60 B from Arabidopsis with 62.61% of identity |
Eggnog | calmodulin binding protein(ENOG4111EYI) |
Kegg | Link to kegg annotations (AT5G57580) |
CantataDB | Link to cantataDB annotations (CNT0002295) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454106.1) |
Pfam | Calmodulin binding protein-like (PF07887.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |