Ll_transcript_505193

• Id Trinity: TRINITY_DN52535_c0_g1_i30
• Name Transcript: Ll_transcript_505193
• Sequence: CGAAGTACTTGTAAATTTTGCAATTTAGACAAAGAAAATTGTTGTCTCATGTTTTAAGATTTTATTTTCTCTCTCTCTCCAAACATTTTTCTCACTCCAA GTTTCTCTCTCACTCTCAGATTTGGTAATATAGGGTATTGGAAGGGAGTGTAAATGCAGAGGAAAACAATGGACACAATAAGTAACAGTATGGGGAAAAG GTCACTGGAAGGTGGTGGAGAAGATGACCAGCCTGAAAGAAAAAGGCCTACTCTTGCCAATGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAA CTCTGCTCATCGTTAGAACCTATTCTTCGTCGAGTTGTAAGACATCTGGCTTCACACTGCTTCTACTATTTAGTTTTCTTTGCGATGTGCTATTTTGAAG AGAGAAGGTTATCATTTCTTCACTGCTTTATACTATTAGTTTTCAAATTCTTATTTTCAAGAGAAAACTATATCATTTCACACTGCAGGACATCTGTTAG GCAATTTGATGGTGTTGGAGTGTTATGGCTTGTGTGTGAATACCCCCTGCCTATTTGTAAAGAGTCGTATTGTTTAACCAATAAATTAAGCTGCATACTA ATTTTGCTTACCTATGCAAACCTAGTGTTCACAGTGGATTGAATGTCCATTTTTCGTTCAGTGTTCCATTTAACTCCATCCTTTTCTTTCCGTGTTCCAT TTAACTCCATCCTTTTCTTTCCGTGTCCAATGTTCCATATGTGATCAAGAGAAGAGATGATACCATATTCATAGAAATTATACTACTATAATATGTTGGG CAATTCTATATACACCCAAAAACCATTGCTTACACCCAAACGGATGGTCCATCCGTGTGGGTTTAAGCACTGATTTCTTGGGCGTTGATAGAATTTCCCT AATGTTTTTAGTTCTTTATGACTTCAAGTTCTGCTTTTGATCCTTTTTTCTGGGTACGCATTTCTGCATTTAGTTCTTAATTAGTTTTATGATACTGATG TGAACAGGTAAGTGAAGAAGTGGAGCGTGCTCTGGCAAAGTTAGGTCCTGCAAGACTTAGTGGAAGGTTTAAGAAAGTCTTCACGTTTCAATAAAATTAG TTCATGAATATTTATAGTTTAGTAACATTCCATATTATAACTATATGCTTTTTATGTATTGTCTGTAGACCTAGCAAATACAGAAATGGATCTGTTAAGG TAACAGATATTAGTTCACTGTCAACATTTGAGTTTCGAGCCCCCTTTTTAGTATAGTAGATTTCGTGGTGTAAATTATTAGGTGGTCTTGAAGTGCATGA CTTTATGGATCCTGGATGGAAAAAATATATACTCTCTGGAAGTTATCTTATGGTTTTTGTTCGTAGTTTCAAGGAATAGGATAATGAATAATATGCGGTG CAATAGGGATGACTGTGCATCTGATTAAACTATTCAAATTTAAAAAGCATTCATACTACTGGATGGTTTTTAAAGGATAATGAAGAATGCTTTATTTTTT GATGGGATAAAAGAATTCACTGTAAAGGAAGAGAGAATACAAAGATAGAGGATTACTAATCCTCACAATCCTCTTAAAAGAACCCAACTAACAATGAAGC GAAGAAAGTAATCATGGCAGGCAATATCTATTGCCAAATATTACAGCATTAAGCTCTAATCATTTGCACAATTGCACCTCACCCTTGCTTTATGAGTGCA TTTCCACAAGACCTTATATCTTTTTCTTTTATTCCAAAGCCATGAAACTGAACAAGAAAATTACATATTTTTGTTACAGAAATCATTTGAAATGCTTAGC TCCTTGGAGGATCTAATGGGATGATAGTGTAGTATGGTGGTAATGATTTCATTCAGTTTGTGATAATCCCCCTTGTATTTAGTTTTACTGTAGGCTATAT GTCTGACCGCAGTAAGCATTGGGTTTTAATAAGCATTTTGAAATGTTGAGGTACTTTATGTGATCCATCTTCATCTGAAACTTGTAAATGAAGTACGGTT ATTTTTTTTGTTCTGCTTCCTAGGTTCATTGAGGTGTCAGATAAAAATATTGTTAACTAGCTAAAGTATGTTCTTTCATAGATGTGTTACTTTGCATACT GTGTCTGTATGGGTTGTGGAGAATGGTTACCGTTCTGGTTCAGTCTTATTTTTTTGTCTTTGAGAAAGTTACATAGTAACATTTCCATTCACCTTTCTTC TAATATATTAGTCCATCGGTCCTTTCTATAGTTGAGACTGGTATTTCCTATATCTACATTATGTCACTAATCCCACTTTAATGGCACCATAATTTTCTTA TATTTATGTTATGCACCTCAAGTTGAGACTGGGATTTAATTCCATCAGTACAAAAATTTCAGGTCTTCCCCAAAAATGATTGAAGGTCCGGATGGTAGAA ACTTACGGCTGCATTTTAGGTCTAGACTGTCTCTTCCCCTATTCACTGGAGGGAAAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTTTTAGTTGA TGCCGATAATGAAAATGTTGTAATAACTGGACCTGAAGCCTCCGTGAAACTTGATGTTGTTGTCCTTGAAGGCGATTTTAATAATGAAGATGATGAAGAC TGGACTCAAGAAGAATTTGAAAGCCATGTGGTGAAAGAACGTGAAGGAAAGAGACCTTTATTAACTGGGGAGTTGCAAGTGACTCTCAAGGAAGGAATTG GAACATTAGGGGAACTAACTTTTACAGACAATTCAAGCTGGATAAGGAGTCGGAAATTCAGGCTTGGCCTGAAGGTTGCATCAGGTTTTTGTGAGTCCAT ACGCATCCGTGAAGCTAAGACAGAGGCTTTCACTGTTAAAGATCATAGAGGAGAATGTAGGGTTATGTTTTTGTATTTTCTGCCTTTTCTCTAGCACCAG CGATCTTCCTGCTTCCACATTACAATACCATCTTTAAACTGTTATTTTCTGTTCTTTGCAGTATATAAGAAGCATTATCCTCCTGCTTTGACTGATGAAG TTTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATAATGCTGGAATATGCACAGTTGAACAATTCCTTCGGCTTGTGGTGAA AGATTCGCAGAAATTGCGGAATATCCTTGGGAGTGGTATGTCAAACAAGATGTGGGAAGCTCTCTTGGATCATGCAAAGACCTGTGTCTTAACCGGGAAG CTTTATGTTTATTACCCAGAAGATACAAGAAACGTTGGTGTTATTTTTAACAACAT
• Tissue: pods
• Gene name: LI_gene_193520;
• Additional information: details;

Expression of Ll_transcript_505193

FPKM

• PAB: 4.4
• PNAB: 2.7
• PS1: 4.2
• PS2: 2
• PS3: 3.8
• PW1: 2.8
• PW2: 3.3
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505193

• Blastp: Calmodulin-binding protein 60 D from Arabidopsis with 82.39% of identity
• Blastx: Calmodulin-binding protein 60 D from Arabidopsis with 70.61% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT4G25800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463484.1)
• Pfam: Calmodulin binding protein-like (PF07887.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;