| Id Trinity | TRINITY_DN52535_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_505166 |
| Sequence | CGAAGTACTTGTAAATTTTGCAATTTAGACAAAGAAAATTGTTGTCTCATGTTTTAAGATTTTATTTTCTCTCTCTCTCCAAACATTTTTCTCACTCCAA GTTTCTCTCTCACTCTCAGATTTGGTAATATAGGGTATTGGAAGGGAGTGTAAATGCAGAGGAAAACAATGGACACAATAAGTAACAGTATGGGGAAAAG GTCACTGGAAGGTGGTGGAGAAGATGACCAGCCTGAAAGAAAAAGGCCTACTCTTGCCAATGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAA CTCTGCTCATCGTTAGAACCTATTCTTCGTCGAGTTGTAAGACATCTGGCTTCACACTGCTTCTACTATTTAGTTTTCTTTGCGATGTGCTATTTTGAAG AGAGAAGGTTATCATTTCTTCACTGCTTTATACTATTAGTTTTCAAATTCTTATTTTCAAGAGAAAACTATATCATTTCACACTGCAGGACATCTGTTAG GCAATTTGATGGTGTTGGAGTGTTATGGCTTGTGTGTGAATACCCCCTGCCTATTTGTAAAGAGTCGTATTGTTTAACCAATAAATTAAGCTGCATACTA ATTTTGCTTACCTATGCAAACCTAGTGTTCACAGTGGATTGAATGTCCATTTTTCGTTCAGTGTTCCATTTAACTCCATCCTTTTCTTTCCGTGTTCCAT TTAACTCCATCCTTTTCTTTCCGTGTCCAATGTTCCATATGTGATCAAGAGAAGAGATGATACCATATTCATAGAAATTATACTACTATAATATGTTGGG CAATTCTATATACACCCAAAAACCATTGCTTACACCCAAACGGATGGTCCATCCGTGTGGGTTTAAGCACTGATTTCTTGGGCGTTGATAGAATTTCCCT AATGTTTTTAGTTCTTTATGACTTCAAGTTCTGCTTTTGATCCTTTTTTCTGGGTACGCATTTCTGCATTTAGTTCTTAATTAGTTTTATGATACTGATG TGAACAGGTAAGTGAAGAAGTGGAGCGTGCTCTGGCAAAGTTAGGTCCTGCAAGACTTAGTGGAAGGTTTAAGAAAGTCTTCACGTTTCAATAAAATTAG TTCATGAATATTTATAGTTTAGTAACATTCCATATTATAACTATATGCTTTTTATGTATTGTCTGTAGACCTAGCAAATACAGAAATGGATCTGTTAAGG TAACAGATATTAGTTCACTGTCAACATTTGAGTTTCGAGCCCCCTTTTTAGTATAGTAGATTTCGTGGTGTAAATTATTAGGTGGTCTTGAAGTGCATGA CTTTATGGATCCTGGATGGAAAAAATATATACTCTCTGGAAGTTATCTTATGGTTTTTGTTCGTAGTTTCAAGGAATAGGATAATGAATAATATGCGGTG CAATAGGGATGACTGTGCATCTGATTAAACTATTCAAATTTAAAAAGCATTCATACTACTGGATGGTTTTTAAAGGATAATGAAGAATGCTTTATTTTTT GATGGGATAAAAGAATTCACTGTAAAGGAAGAGAGAATACAAAGATAGAGGATTACTAATCCTCACAATCCTCTTAAAAGAACCCAACTAACAATGAAGC GAAGAAAGTAATCATGGCAGGCAATATCTATTGCCAAATATTACAGCATTAAGCTCTAATCATTTGCACAATTGCACCTCACCCTTGCTTTATGAGTGCA TTTCCACAAGACCTTATATCTTTTTCTTTTATTCCAAAGCCATGAAACTGAACAAGAAAATTACATATTTTTGTTACAGAAATCATTTGAAATGCTTAGC TCCTTGGAGGATCTAATGGGATGATAGTGTAGTATGGTGGTAATGATTTCATTCAGTTTGTGATAATCCCCCTTGTATTTAGTTTTACTGTAGGCTATAT GTCTGACCGCAGTAAGCATTGGGTTTTAATAAGCATTTTGAAATGTTGAGGTACTTTATGTGATCCATCTTCATCTGAAACTTGTAAATGAAGTACGGTT ATTTTTTTTGTTCTGCTTCCTAGGTTCATTGAGGTGTCAGATAAAAATATTGTTAACTAGCTAAAGTATGTTCTTTCATAGATGTGTTACTTTGCATACT GTGTCTGTATGGGTTGTGGAGAATGGTTACCGTTCTGGTTCAGTCTTATTTTTTTGTCTTTGAGAAAGTTACATAGTAACATTTCCATTCACCTTTCTTC TAATATATTAGTCCATCGGTCCTTTCTATAGTTGAGACTGGTATTTCCTATATCTACATTATGTCACTAATCCCACTTTAATGGCACCATAATTTTCTTA TATTTATGTTATGCACCTCAAGTTGAGACTGGGATTTAATTCCATCAGTACAAAAATTTCAGGTCTTCCCCAAAAATGATTGAAGGTCCGGATGGTAGAA ACTTACGGCTGCATTTTAGGTCTAGACTGTCTCTTCCCCTATTCACTGGAGGGAAAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTTTTAGTTGA TGCCGATAATGAAAATGTTGTAATAACTGGACCTGAAGCCTCCGTGAAACTTGATGTTGTTGTCCTTGAAGGCGATTTTAATAATGAAGATGATGAAGAC TGGACTCAAGAAGAATTTGAAAGCCATGTGGTGAAAGAACGTGAAGGAAAGAGACCTTTATTAACTGGGGAGTTGCAAGTGACTCTCAAGGAAGGAATTG GAACATTAGGGGAACTAACTTTTACAGACAATTCAAGCTGGATAAGGAGCCGGAAATTCAGGCTTGGCTTGAAGGTTGCACCAGGTTTTTGCGAGTCCAT ACGCATTCGTGAAGCTAAGACAGATGCTTTCACTGTTAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCTCCTGCTTTGAGTGATGAAGTTTGG AGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATAATGCTGGAATATTCACAGTTCAAGAATTCCTTCGGCTTGTGGTTAAAGATT CACAAAAATTGCGGAATATCCTTGGGAATGGTATGTCAAACAAGATGTGGGAAGTGCTCCTAGATCATGCAAAGACCTGTGCCCTAACTGGGAAGCTTTA TGTTTATTATCCAGAAGATACGAGAATTGTTGGTGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATAACAGGAGAACAATTCTTTTCCGTTGAT TCGCTCACTGATAGCCAGAAGGTTTATGTAGATTCTTTGGTGAAGAAGGCATATGAAAATTGGGATCAGGTTATAGAGTATGAAGGTAAATCACTCGCAA GTCTTAGGGAAAATAATGTTATAGCTGACAGTGAATTTCGTATTGAGTCGATGGATTACTCTAGTGGTTTGGATCATCAATTGCGTCTGCCACTCCCCCC AGCACCTGTTCCTTCTGAACAGCAAATTAATTCAGGGATGTTAATTGGAGGTAAGCTATTTTAATAGATTCTCTTTTTTGCTCCTTCCCTGTCCTTTTCT TTTGGGCGGTTGATGTCACATTTTCAGTTACTCTGTCTCTCAAATATGATTTATGATGCTAATGAAGTAGTGAGATGCTTTCTATGATGTTAATAAACTA AAATTTTGATACAAATAAATATTTTTGATAATGAATTGTTTTCTTCTCACCTCCACCCCTTGGACAAAAAAAATATCTCTTACACGTATACATGAATGAA ATTTGCTCATTTGCAAAGCTCTATGCAATACAAATCCTTTTCAGGTTATAATGATCATATGGTAACAAGATATCCAAGCCAGTCACTGATAGAAAATCTC AACTCACGTAACCAGTTTGATAGCTCTCTATATCTATCTAATGACCAATTAATCAACAGTGCCCAGCAAACCAAAACCACTAGAAATGCTCATGGTGCAG GTCTTGGTCCTCCTCAATCATCATCTTCCTCTTCATCCTCATCATCACCAGGGTTTCATGTTGGCAGCACTTCTACGCAATCATCTACTGTAAATCCTTT TGACGATTGGTCACACAACATGGACAAGGGGGTCAATGAATTCTTTTCAGAGGATGAAATCCGCCTCAGAAGTCACGAGATGCTAGAAAATGAAGATATG CAGCACTTGCTTCGCCTCTTCAGCATGGGAGGTAATTCCTCCATGAATGCTGGGGACGGCTATTCAATCCCATCATTCATGCCATCACCTATGCCGAACT TCGATGGGGATCGCTCTCGTTCAGGCAGAGCTGTTGTGGGATGGCTAAAGATCAAGGCAGCAATGAGGTGGGGCTTTTTTATCAGGAAGATAGCAGCTGA GAAGCGGGCACAGATAGAGGAGTTAGATGAATAAGTCATTTGGACAAATGATTTCGGGGTGAATAGGTAGCCTTAAGATTTTACACACAAGTTCTGCAAA TTTAGTTTGTCTTCATCGGTGCAACCAAATTGTGCAGTCCGTGGGTGTTGACATTCATAGTGATGCATCTGTGTATCTGATTTTACTGCAAGTTTGTACA GTACAATATCCTGTACAGTACAATATCCTGTACAGTGTTTTGATGCTTAGGAAAAACCTGGATTGTTATTTGTTTTTCACCTTTGTGCTAATGCTCCTTT GTTATCACCTTTCCATTGGTTCTGGAGCACATGTCCTGTCAGATGATAACTTAGATTTGTCATCTCACTTGATTGATGTATATGAATTATGATCTACTTA AGTTTCTAGTTGTATTGTATGTTACTATCATCGTCGTTATCATCTTCATTTTTTAATTTCGGTATCTTAATGAGTTGACTCAGAACATGAACCTCTTAAC AATACTTCACCGCTCATGCATAACAGCTATGCAGATTTATCATTTTATGTATCAGTATCTGGTGTTGGGTTGTATTTATTGTGTTTCCCGTGTGAATGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_193520; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505166
| Blastp | Calmodulin-binding protein 60 B from Arabidopsis with 68.41% of identity |
|---|---|
| Blastx | Calmodulin-binding protein 60 B from Arabidopsis with 68.56% of identity |
| Eggnog | calmodulin binding protein(ENOG4111EYI) |
| Kegg | Link to kegg annotations (AT5G57580) |
| CantataDB | Link to cantataDB annotations (CNT0002295) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454106.1) |
| Pfam | Calmodulin binding protein-like (PF07887.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |