Id Trinity | TRINITY_DN52535_c0_g1_i9 |
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Name Transcript | Ll_transcript_505168 |
Sequence | TTGGTATTTTACCTTTTTAGCTGTGTCTGTTAGGGTTTCTTTTTTTATTACTTTATTATTGTTTTGTAGATTAGTTTATAATGGTGGTGACTTTGTTGTT TTGGAGTGGTTTCAGATTTGGTAATATAGGGTATTGGAAGGGAGTGTAAATGCAGAGGAAAACAATGGACACAATAAGTAACAGTATGGGGAAAAGGTCA CTGGAAGGTGGTGGAGAAGATGACCAGCCTGAAAGAAAAAGGCCTACTCTTGCCAATGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAACTCT GCTCATCGTTAGAACCTATTCTTCGTCGAGTTGTAAGACATCTGGCTTCACACTGCTTCTACTATTTAGTTTTCTTTGCGATGTGCTATTTTGAAGAGAG AAGGTTATCATTTCTTCACTGCTTTATACTATTAGTTTTCAAATTCTTATTTTCAAGAGAAAACTATATCATTTCACACTGCAGGACATCTGTTAGGCAA TTTGATGGTGTTGGAGTGTTATGGCTTGTGTGTGAATACCCCCTGCCTATTTGTAAAGAGTCGTATTGTTTAACCAATAAATTAAGCTGCATACTAATTT TGCTTACCTATGCAAACCTAGTGTTCACAGTGGATTGAATGTCCATTTTTCGTTCAGTGTTCCATTTAACTCCATCCTTTTCTTTCCGTGTTCCATTTAA CTCCATCCTTTTCTTTCCGTGTCCAATGTTCCATATGTGATCAAGAGAAGAGATGATACCATATTCATAGAAATTATACTACTATAATATGTTGGGCAAT TCTATATACACCCAAAAACCATTGCTTACACCCAAACGGATGGTCCATCCGTGTGGGTTTAAGCACTGATTTCTTGGGCGTTGATAGAATTTCCCTAATG TTTTTAGTTCTTTATGACTTCAAGTTCTGCTTTTGATCCTTTTTTCTGGGTACGCATTTCTGCATTTAGTTCTTAATTAGTTTTATGATACTGATGTGAA CAGGTAAGTGAAGAAGTGGAGCGTGCTCTGGCAAAGTTAGGTCCTGCAAGACTTAGTGGAAGGTTTAAGAAAGTCTTCACGTTTCAATAAAATTAGTTCA TGAATATTTATAGTTTAGTAACATTCCATATTATAACTATATGCTTTTTATGTATTGTCTGTAGACCTAGCAAATACAGAAATGGATCTGTTAAGGTAAC AGATATTAGTTCACTGTCAACATTTGAGTTTCGAGCCCCCTTTTTAGTATAGTAGATTTCGTGGTGTAAATTATTAGGTGGTCTTGAAGTGCATGACTTT ATGGATCCTGGATGGAAAAAATATATACTCTCTGGAAGTTATCTTATGGTTTTTGTTCGTAGTTTCAAGGAATAGGATAATGAATAATATGCGGTGCAAT AGGGATGACTGTGCATCTGATTAAACTATTCAAATTTAAAAAGCATTCATACTACTGGATGGTTTTTAAAGGATAATGAAGAATGCTTTATTTTTTGATG GGATAAAAGAATTCACTGTAAAGGAAGAGAGAATACAAAGATAGAGGATTACTAATCCTCACAATCCTCTTAAAAGAACCCAACTAACAATGAAGCGAAG AAAGTAATCATGGCAGGCAATATCTATTGCCAAATATTACAGCATTAAGCTCTAATCATTTGCACAATTGCACCTCACCCTTGCTTTATGAGTGCATTTC CACAAGACCTTATATCTTTTTCTTTTATTCCAAAGCCATGAAACTGAACAAGAAAATTACATATTTTTGTTACAGAAATCATTTGAAATGCTTAGCTCCT TGGAGGATCTAATGGGATGATAGTGTAGTATGGTGGTAATGATTTCATTCAGTTTGTGATAATCCCCCTTGTATTTAGTTTTACTGTAGGCTATATGTCT GACCGCAGTAAGCATTGGGTTTTAATAAGCATTTTGAAATGTTGAGGTACTTTATGTGATCCATCTTCATCTGAAACTTGTAAATGAAGTACGGTTATTT TTTTTGTTCTGCTTCCTAGGTTCATTGAGGTGTCAGATAAAAATATTGTTAACTAGCTAAAGTATGTTCTTTCATAGATGTGTTACTTTGCATACTGTGT CTGTATGGGTTGTGGAGAATGGTTACCGTTCTGGTTCAGTCTTATTTTTTTGTCTTTGAGAAAGTTACATAGTAACATTTCCATTCACCTTTCTTCTAAT ATATTAGTCCATCGGTCCTTTCTATAGTTGAGACTGGTATTTCCTATATCTACATTATGTCACTAATCCCACTTTAATGGCACCATAATTTTCTTATATT TATGTTATGCACCTCAAGTTGAGACTGGGATTTAATTCCATCAGTACAAAAATTTCAGGTCTTCCCCAAAAATGATTGAAGGTCCGGATGGTAGAAACTT ACGGCTGCATTTTAGGTCTAGACTGTCTCTTCCCCTATTCACTGGAGGGAAAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTTTTAGTTGATGCC GATAATGAAAATGTTGTAATAACTGGACCTGAAGCCTCCGTGAAACTTGATGTTGTTGTCCTTGAAGGCGATTTTAATAATGAAGATGATGAAGACTGGA CTCAAGAAGAATTTGAAAGCCATGTGGTGAAAGAACGCGAAGGAAAGAGACCTTTATTGACTGGGGAGTTGCAAGTGACTCTCAAGGAAGGAATTGGGAC ATTGGGAGAACTGACTTTTACAGATAATTCAAGCTGGATAAGGAGCCGAAAATTCAGGCTTGGGTTGAAGGTTGCATCAGGTTTTTCCGAGTCCATTCGT ATTCGTGAAGCTAAGACAGAGGCTTTCACCGTTAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCTCCTGCTTTGACCGATGAAGTTTGGAGAT TGGAGAAGATAGGCAAGGATGGGTCATTTCACAAAAAGCTGAATAATGCTAGAATATTCACAGTTGAACAATTCCTTCGGCTTGTGGTGAAAGATTCGCA GAAATTGCGGAATATCCTTGGCAGTGGTATGTCAAACAAGATGTGGGAAGCGCTCTTAGATCATGCAAAGACCTGTGTCCTAACCGGGAAGCTTTATGTT TATTACCCAGAAGATACAAGAAACGTTGGTGTTATTTTTAACAACATCTATGAGCTACGTGGCCTTATAGCAGGAGAACAATTCTTTTCTGCTGATTCTC TCACTGATAGCCAGAAGGTTTATGTAGATTCCTTGGTGAAGAAGGCATATGACAATTGGAACCAGGTTATAGAATATGATGGCAAAGTTTTTAACTCCAA AAAGGGTTCAAGATCTTTAGTAACACCTATGTTGCTTCAAAACAATGTCCAAGAGCAGCACTATACTTATCAAAAGAATAGGCTTCCATATGTCCCCTCT GAACCAAATCAACATTTGCAAATAACAAATAACTACTCATCTGGCCCCGAGATGTCTGATTATCCGTTCGGAAGATCTGATAATCAGATGGTAGGGACAT CGTCGAATAACTCTCAAATAGCATTGTCAGGCAGCATGAATTACATACCCGATGAACATCAGGAAGTTGAAGGTACATATTTTCAAGGAGACTGGTCTAA GCAGAGAAGTGGGCAAGGATTGGAAGACATTGTAGCCGAAGAACTCCGTGTTAGGAGTTCGGAGATGTTGGGGAGTGACGATATGCAACGGTTACTTAAG ACAATTAACTATGGCCATTCTAATGAGGCTTGTTATACCTATAGTCTTCAATATGAGCCTCAGATGTATGATTCTTTCAGTGAGGATCATAGTAAGTCTT CAGGAAAAGCTGTTGTTGGATGGCTTAAGCTAAAAGCTGCTTTGAGATGGGGCATATTTATAAGGAAAAAAGCTGCAGAAAGGAGAGCACAGCTTACTGA GTTGAATTGAGGTAAATGCTTGAAAGTGGGAAATTTTCACCTCATTTCAAGCTAGGAGCTTGCTTAAATTATGCTCGAACCGTCGTGTAACCGGTGTTCA ACTGACAGAAGAATTTAGAAAAAGTTGTAAAGAAATGCATTATAAAGTGGAAACTATGTATAATGTGGCAACAAATTCAAGACTACAACCTAGGACATGC TTAAATCGCAGACCACAGCTTTCACTGAGATTAAATATTAGACAGGACTGTGTTAAGCTCTCTCTCATTGTGGCATTTTTTGCATTATTATTGTGTAATT TAATTGTGATTCATATTTTTTGCTTTTACTGATCTGAAGTTTGTATCTAATGTGAATTGTTTTTAATTACATTATGACACTGTATCATGAAATATTTATG AGCTTATCCCACATGTAATAAAATAACTTGTAATGAAGAATTAGACAACTTTCATGTTCATGAGGCACACATGTGATTCATCTATGCCAAGTGAATGAAA ATAAATAATTTCCTTAAAGCTTAG BLAST |
Tissue | pods |
Gene name | LI_gene_193520; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505168
Blastp | Calmodulin-binding protein 60 B from Arabidopsis with 57.71% of identity |
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Blastx | Calmodulin-binding protein 60 B from Arabidopsis with 57.9% of identity |
Eggnog | calmodulin binding protein(ENOG4111EYI) |
Kegg | Link to kegg annotations (AT5G57580) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417146.1) |
Pfam | Calmodulin binding protein-like (PF07887.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |