Ll_transcript_507406

• Id Trinity: TRINITY_DN52536_c2_g1_i4
• Name Transcript: Ll_transcript_507406
• Sequence: GAGAGAGAAGAAAAATACGTGTTAGGATTAGCATAAACATAGAACACACCAAGTCCCACATTCACTTAACAAACATCACTTTCCTATGTTTGGTATTGTT CTATATTCAACCCTTTCTTTCATTCATCATTTTCTTCTTCTTCTTCTTCTTCATTCTTCGTTCTTCTTCTTCACTACTTTCTTTTCACTTCTTGGATCTT CACACCCCATTTCTTGTTATAATCTAAGGAGCTTCCAAACATACAACTTTTCTTGCTCCTTCTTCTTTTTCCTTACTCATAAGGTAGCAGAGGCACCATT TTTCCGAGTCCGATTTTGGTTTGTTGATTGGCAATGGGAGGTGTGTTAGGAAAGGGTGAATCACCCAAAAAGGTTTGGGCACCGGAAACCAAGCTTGAGG CTAAAATGGTTGAAGCAATGCAGCGAAGGGAATCTCAGGGAAGTTCCGTGAAATCATTCAACACCGTAATCTTGAAATTCCCAAAAATCGACGAGAGCTT GAGGAAATGCAAAGCCACATTTGAGCAGTTTGATGAGGATTCTAATGGAGCAATAGATCAAGAAGAGTTGAAAAAGTGTTTCACTAAGCTGGAAATTTCT TTTACTGAGGAAGAGATCAATGATCTTTTCGAAGCATGCGATATTAATGATGATTTAGGAATGAAGTTCAGTGAGTTTATCGTACTTCTCTGCCTTGTCT ACCTTCTCAAAGATGAGCCGAAAGCCCTCCACGCTGTATCCTAGCACACAACATTCGCGCCGTATTAATTTCATTACTATGTGATGCTATCTATATACAT AATACAGGGAAACATTCTTAAATCAATTTTCGAAGATAGACAAGTAACAATGCGATTTAAAGAACATGTCATGCCTTATGTGCTCTTCTTTCTAACCTCT AGTTGCTCTTTGACTTATTCGGAGAATTTAGTTTAGATTCTTCTGTATTTTTTGTAGATTATGTAGCCAAGTGTTTATTTAATTAACTAGACGGTTGATC TAATTCGATCAATTTGTCGAAGCAATGCGATATAGGAGGCAGATAAACACTTCGCATGCATGCCTTCCTGTTTGCTTTGATAATCGTAAGCCTCGAAAAT CCATGTTTTGCTGCCTTTTCAAATTGTTCTCCGTGACTTAACTTCTCTAGAAATCGAGAATTGGGATGCCAAATCTGGAGGCCACATTTGAGACTTTGGT TGATACATTTGTGTTCTTGGACAAGAATAAGGATGGTTATGTTAGCAAAAATGAGATGGTTGCAGCTATAAACGAGACTACGTCCGGGGAGCGTTCTTCC GGAAGAATAGCTATGAAAAGATTCGGTCAGTTCTCTCTCCCCCTACCATATGCAAATACACATACATGTATATGAACTTATGCTAGTATCATGCATTTTA TAATAATGTTTTGAAATATGCTATAACATGCTTGATCAAGAAAAATGAGTGCCTCTTAATTGATCACTAAAAATAAACTCCTATTGCATTTAGTCCTCAA ACTAGAACATAGGACATTCAATGACAACAACAGCGAAGCCTTTATCGAAACTCTATCCTATGGAGCATAGGACATTCCTACGAAAATATTAGAAAAGGCA GCATTTAAGAAACTCGTGGCGAGTTAGTAGACTGTATTCTTTCTATTGAAGAGGTTGTCTGTTTATCCATTGCATTCTTCTGTTTCTAGTCAACGACAAC AATCAAGCCTTTATCCTACCAGGTCGGGTTGGCTACATGGATCGAACGATGCCATAATATTGTATCATAAATCATGTTCATCGATAAAACATTCATCTCT AAGTCTTTCTTAACCATTTTGCCTATGTTTTTTCTTGGTCTCCCTCTGCCTCTAGGAATTATACTAGCCTCCATTGGATCGAACGATGTCATAATGTTGT ATCATAAATCATGTTCATCGACAAAGCATTGATCTTTAAGTCTTTCTTAACCATTTTGCCTATGGTTTTTCTTGGTCTCCCTCTGTCTCGAAGAATTATA CTAGCCTCCATTTAATTTACCGTCCTTACCAAGGCTTCTACCGGTCTCCTCCGCATTTGTCCAAACCACCTGAGACGCGATTCTATCATCTTTTCCACAA CAAGAGCTACTCCAACTATCTCCGTAATGCATTGTTTCTAATCCTATCTTGTCTAGAGTGTTCGCCGATCCAACGCAACGTTCTGTTTCTAATCATGTTA ATATTTGTCATGGCCATCATAAGTAAAATCCAAAGCTAGCCTCAAGTTTCTTCATTCACATGTAAAAATGGAACTTCAATTCTAATCTTGTCTTTGTTTT TTCTTCCAAGCAGTGTTATATTCATCTAATAAATATGTATTCCTTTTAAACTCTTGCAGAAGAAATGGATTGGG
• Tissue: pods
• Gene name: LI_gene_193527;
• Additional information: details;

Expression of Ll_transcript_507406

FPKM

• PAB: 2.8
• PNAB: 0.4
• PS1: 0.6
• PS2: 1.1
• PS3: 0.6
• PW1: 0.8
• PW2: 1.1
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507406

• Blastp: Probable calcium-binding protein CML21 from Arabidopsis with 66.92% of identity
• Blastx: Probable calcium-binding protein CML21 from Arabidopsis with 66.92% of identity
• Eggnog: Calcium-binding protein(COG5126)
• Kegg: Link to kegg annotations (AT4G26470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446978.1)
• Pfam: Secreted protein acidic and rich in cysteine Ca binding region (PF10591.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;