Id Trinity | TRINITY_DN52537_c2_g5_i4 |
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Name Transcript | Ll_transcript_506063 |
Sequence | TGACGATTGGCGCAGGTCTTGTAATTCTGAGAGTTCTATACATGAGGCAGTTCTCCATTGCAAAAGATCCATTGGCCCAATACAATTGCTAGATGATTGG ACTCCTTAAGCATGGTGATGGTGTCAAGGATTTGATTCAAGTCATGCATATGAAAAAGGCTTTGTTGGTAGAAATTTTCCAAAAGGGGTCAGTATTAATA ACTTGATATAGACGCATAGTCACTGGAAAAGCTAGAACTCCTTCCTCACTTGTCCAACTAATGAAGGTTACTTCTGCTCATAATTTTCTCACTCATTTGA AGGAGGGTGTAATAGTTACAATAGCTTCTAAATTATGTTTATCGGAGTTAGCAAACTTCAAGTAATTTTTGATCTCTTTGGCATGTCCATGTCTTAGATG AAACCACTTCTTATTTGGTTTTTGCTTTCTATTACTTATGGCAATGGCGAGGTCATTGGGGAAGAGGTCTTGGAGGACAAAGGCATGCATTATAGTTGAG AAAAGGAGTGCTGTCACTATGAGTGAGGAAATGAGGCTTAACATTGTAGACAAAGCCTTTGTCATAACATTTGTGACTTGATTTGAGTAGTTTATGGTTG CAATTGCTGCACCAGTCATTGGAAAAGTGTAGGCCCACCATGAAAGTGAGAATCTGCATAATCACATTCACATCATATATGTGTCAGAAAAATCAAAGTA ACCAAACTAATAGATATGTGGGTGAGGAAGTAACATACTTGAATCCTCTGAAAAAATTGACCCGGACAGCCTGCAAAAGCATATATGAAACTAATAAATA ACTTGCATAATAAAGATAAATTACTGATATATGCATTTGAGATATAGTTAGTTACAAGTTGTTTATTTCTCAATGTACACAAGCAACATAAATGGCTTGA TGTAATACTTTCTCATTGAACTGATTTCAGATTTAAGTTTTCTTCTTCTCAATTGCTATACCATGTTTGAGAAAATTGTGGAAAATGAAAGGTTTGGAAC CACAGTGGTTATGCATATTTGTAGTACTAGTGTGACAGTTTAACATACCAGTGAGAAATAAAGGAACATGGCAATAAAATAGGCAATCCGTGATCTATAA TCAAAAGAACCCTGAATTCTAGCCCATGCCACAGAAGCAACACTAGGTGCTGCCACAAACAGAAAGAATACTGGATGGAGATCTTTTGGTAGGGTCTCAT TTGTTGGAAGTCTCTGATAGAGAGTTACAAACAAGACTATGTAGTGAGCCAAACCAACAGCAAAGAAGAACATAGGCCCTTCTTTAAGACCCATAGATGC ACCTAGTAATGCTCCTACAAAGTTTCCAACAATTGAAAGATGATTTGATGGATTTGCCACCTTTGAAAGCCTCCTTTCTCCCCCAGACATCCACTGTCCG TAAATTTTGAGCTCAAGACAGACTAGTGGAGCCATTAGAATGTACCAAAGTGCAGGAGGCAAGTTTTTGGCAATTGATGGGGGAACACCAAGAGCTAAGA ACAAGAGTGCTATCCAAGGGGAAAAGAAGAAGTTAACACGGATTGGATGATAGTACTCGCGACGAACAGCTTCGAAGTAGAGAATGATTTTGAGAAGATA TATGGTGAAAATAGTAGCGGTAAGAGCGATGGAGATGAACCATAAGATGAAATTTATTTTCAAGCTTATGTGAAGAAATGCAGTGGAAGGAGACATGGCC AGTGCTTTCCAAAGAATTGCTTGACTGCTAACTCCAAGACAAATACCAAAAGTTGATACTGGAAACCGAAGAGGAAAGGGCCACTGGTTGTCCGAAGGAA GCACTATCTCTTCTGAAGCCTGTTGATGGAGGAAATCAAAATAAAATGTGTTACAATCTTCAATAAGAGTTTTTAATAAAATGTGTTGTATTGTTTATAA TCTAGGATGTTGATTCTTTTTAATATAAAATTAGTATAACTGTACTTAAATTGGTAGAAGGTAATTACATACCCTAAGAGTTTCTAACTCAGGACCTTCC AATGCATCGAAGTAGCGACTAACAGGTAAAGGCCTATCGGTGTTCCTTATGCCGCTGTCCTCTTCTACAGTTAGTGCAGGTGACCTTCCACTTAGAATTG AAAACTGTTTCTCAAGTTTGCCTGACCATGTTTTGAAATAGTCAAATCTGCTATCCTTCAAGCTTTTGATGCTTTGATGATTGGCAAAGTTAACACCACT AATTGCCTCTAGTTGCTCACTGCTTTTTGATGGCAATGGATGCTTGGAGTCTTCAGTATTTATTTGAGAAGAGGATATGGGAATACCATCTCTCAAATCA GTTTCACCACTACAGAGAACTTTAATGCTGTTCTGTGGCTGAACCTCTTCACAACAGAGTGGCATGTTGATAGATACCAAATGCTTCTTTTGATGATTGA TGGTCACAGGTTCATCCACTTGTCCTTCTGCTGAGACTGTTTCACTTTTCTGTTACAAGCATTAAAAGAGTTTGATTTTACATATCTCCTAAATTATAAT CATCAAAATGGATGATCAATGGTACTAAAAATTTCAAGTTGTTCCATCAAATGAATTCAATTCTAGAAATCTATTTTCGACCTCTTCTTCAATTTTGCAG GCATGTTATTGAAATTTAAAAAGAGACTTACTATTGAAGATAGGCTGGGATATTGAAGGTCACTAGCATAAAAGGCAGCTACTTCATTTGATGATATATA CTCAATTAGTGATGGAACTTCAGACAAGCCATATTCTTCTACTTGACAGTTTTCCATTATTGACCTGAAAGGATATGGTACACGTTGCAATCCAATATAT ATTATGCCCTAAAGATGGAGGGAGAGTGAAAAACCTAAAACCCACTTGTTGAAGTTGAAAAGATGTCATCAAAAATAGGTTTTTGTCTCCTAAGGTTGGT GCAAGTTTCACAGCAGTGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAACAACAACTCACTTATTTCCTTTAGATAGTGAGGAAGTTGGTTTTA TTGTATAGTTGTCAGCATTCATCTTGAGACTATTGAACTCAAACAATGTGTAGATCATCATGCATCTATGTTAGTCATGTTTTAGAAATGCAGTGTAGTT TTAGCATTTTTTAATAATATATACAAAACCACAGGTCACAGGTGCATCATTAAATATGGACAACAATCTCAGACACTAGAACTTTGTATATTTATGAATT ATGATTGTGTTGCTGTAATGCTTATAAAGTTTGTTTCAAATAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_193540; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_506063
Blastp | S-type anion channel SLAH3 from Arabidopsis with 50.62% of identity |
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Blastx | S-type anion channel SLAH3 from Arabidopsis with 61.79% of identity |
Eggnog | C4-dicarboxylate transporter malic acid transport protein(ENOG4111I0D) |
Kegg | Link to kegg annotations (AT5G24030) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427718.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |