Ll_transcript_506688

Id TrinityTRINITY_DN52540_c0_g1_i15
Name TranscriptLl_transcript_506688
SequenceGAGATTCTTGCCCATCTCCTTTTCCCTAAAATCTCCAACCTTTTCCACCAAAACCCTACTCCTTCATTTCCCGCCCTACACAAATAAACCCTTGATGAAG CTTCCATCTTCTCCTTGAGCCAGCGCCCCACAACACCACACCACACCACACCAAACCCTTTTTCTCATTTCCCTCTCTCACATTGTTTCATCACTGCCAC GTGGCACCATGGTTTCTCCGAAGCAACTCCTCTCCACACTTGAATCAACGCTTCTCGGACCTTCGCCTCCAACCGCCGCGCAGCGCGTCGAACTCTTGCA CGCTATTCGCACTTCTTCACGTTCCTTCCAATCTCTTCTATCCTATTCGGACCCTAAGTCCTCTGATCTAAGTCAGGTTCAGTCTAAATCAGTTAGGCTT CCAGATTCTTCGCCTATCTCTCTCGATGACCAGGATGTCCAAATTGCACTCAAATTGAGTGATGATCTCCATGTCAATGAAGTAGATTGTGTTCGCTTGC TTGTATCAGCTAATCAAGAGTGGGGCTTAATGGGAAGGGGACCACTGGAAATTCTACGGCTTGCAGCGGGGCTCTGGTATACAGAGAGAAGAGATCTGAT AACATCCCTCCATTTGCTGTTAAGGGCTGTGGTGCTTGATCAGGGTCTTGAAGATGATATATTGGTTGACATTCAGAAATATCTGGAACATCTTATCAAT TCTGGACTAAGACAGCGGTTGATTTCTCTTATCAAGGAACTCAATAGAGAAGATTCTTCTGGTTTGGGTGGTCCCCAGTGTGAGCCTTACATTCTTGATT CAAGAGGTTCTCTTGTGGAGCGGCGGGCAGTGGTCTCTAGAGAAAGACTTATTATTGGACATTGCCTTGTCCTTTCAGTTTTGGTTGTTCGGACAAGTCC AAAGGATGTGAAGGATATTTTTTCTGTTTTAAAAGATTGTGCTTCCGAAGTCAGTGTGTGCAATACCACGGTAAAACATCAGATTACCTTCAGTCTTCTT TTTGCTCTTGTGGTTGCATTTGTTTCAGATGGTTTGAGTACAGTGCCGGATAAAGCATCTATACTTTCTTCTGATGCTTCCTTCAGACGTGAATTTCATG AACTTGTAATGGCTACCGGAAATGATCCAGTTGTTGAAGGCTTCATTGGTGGCATTAGACTTGCTTGGGTGGTACATTTGATGTTAATACAAGATGGTGT TGCAGCAAGGGAGACTGTTTCAAGTGGTTCATCAAATGAAATGGGTTATCTCAGTCAATGCTTGGATGTCATTTTCTCAACTAACAGTTTTCAATTTTTA TTGGACAAAGTTCTTCACACAGCTTCTTACCAGAATGAAGATGAAGATATGATCTACATGTATAATGCTTATCTTCACAAGCTGATCACCTGCTTCTTGT CTAATTCACTTGCGAGAGACAAGATAAAAGAATCCAAGGAGCGGACAATGAGTGTGCTTAGTCCATACCGAGTTGTTGGATCACATGATTTTGCACAGGA CAGGAACTCAAGTTCTCAACATGGCTCTGACATGGGTGCTTTAACATTTAATTCAATATTGGACTTTGTGAGCGAAATTTATCAGAAAGAACCAGAGCTG TTGTCTGGAAATGATGTGTTGTGGACATTTGTAAATTTTGCCGGAGAAGACCATACAACCTTCCAAACACTTGTGGCTTTCTTAAATATGCTGAGCACCT TGGCTTCTAGTCAAGAAGGTGCTTCTAAGGTTTATGAGTTGCTGCAAGGTAAAGCATTCCGCTCAATTGGGTGGAGCACTTTGTTTGAATGCTTAACAAT TTATGATGATAAATTCAAACAGTCTCTTCAAACTGCTGGAGCGATGTTGCCTGACATTCAGGAGGGGGATGCAAAAGCCCTCGTGGCATACTTAAATGTT CTGAAGAAGGTTGTAGAAAATGGGAACCCAATAGAAAGGAAAAACTGGTTTCCTGATATTGAACCATTGTTCAAGCTTCTTAGTTACGAAAATGTACCCC CATATCTTAAGGGTGCTCTACGGAATGCAATAGCCACATTTATTCATGTCTCTCCAGTGTTGAAGGATAGCATTTGGACCTATCTTGAACAATATGACCT GCCAGTAGTTGTTGGGACAAATGTCCAGAATACTCAACAACCCGTGGGTACTCAGGTTTATGATATGCAATTTGAATTGAACGAAATCGAAGCAAGGAGA GAGCAATATCCTTCAACTATATCTTTTCTTAATTTGATAAATGCTCTTGTTGCAGAAGAAAGAGATTTGAGTGATAGAGGGCGAAGATTTATTGGCATAT TTAGGTTCATATATGATCATGTTTTTGGGCCATTTCCTCAGAGAGCCTATGCAGATCCTTGTGAAAAGTGGCAGTTGGTTGGTGCTTGCCTTCAACATTT TCGCATGATATTAACCATGTATGATGTCAAGGATGAGGACTTTGAGGGTATAGTTGACCAGTCACGACTTTCAACAACGAAAGAATCATCACCACTTCAG ACACAACTTCCTGTATTAGAATTGCTTAAAGATTTCATGAGTGGTAAGACTGCATTTCGGAACATTATGGGTATTCTTCTACCAGGAGTGAATTCCATCA TTGCTGAACGCAGTAGTCAAATATATGGGCAGCTTTTGGAGAATGCAGTTCAGCTTTCTCTGGAAATTATAATACTAGTGCTTGAAAAAGATTTACTTCT TTCTGATTATTGGCGTCCTCTATACCAGCCATTGGATATTATACTCTCCCATGATCACAGTCAAATAGTGGCTTTGTTGGAGTATGTCAGATATGATTTT CAGCCAAAAATTCAGCAGTCCTCTATCAAAATCATGAGTATTCTAAGCTCTCGGATGGTTGGGCTCGTTCAGCTATTGCTAAAATCTAATGCTGCAAACA GTTTGATAGAAGATTATGCAGCCTGCCTTGAGTTGCGGTCAGAAGAATCTCAGACAGTTGAAAATAACACTGATGATCCAGGCATTCTTATTATGCAACT TTTAATTGACAACATCAGCAGGCCAGCTCCAAATATCACTCATTTACTACTTAAATTTGATCTAGACATGCCTGTTGAGCGAACAGTTTTACAGCCTAAG TTTTATTACAGTTGCATGAAGGTTATTCTTGATATGCTGGAGAACCTTTTAAAGCCTGATGTGAATGCATTGCTTCATGAATTTGGTTTTCAGCTACTTT ATGAACTATGCATTGATCCACTAACATGTGAACCTACAATGGATTTGTTATCAAATAAAAAGTACCATTTCTTTATTAAGCACCTTGATACAATTTGTAT TGCTCCACTTCCTAAACGGAATAGTAACCAGCCTCTTCGTATCAGTTCGCTTCATCAGAGAGCATGGCTTTTAAAACTTTTAGCTGTTGAACTACATGCT GGTGATGTTAGTAGCTCCACACATAGAGAAGCATGTCAAACAATCCTCTCTCACCTTTTTGGACAAGATATGCTTGAAATTGGTGGAGGGCAGGCTATGT CTCCATTTTCGCTTCAAGCTACTTATGAAAATGCTGCTATAAGAACTGTCAGTAAGAGTAAGGTATTAGAATTGCTAGAAATTATCCAGTTTAGATGTCC AGATGCTTCTAAGCTCTCAAATATTGTGGCTGGTATGAAGTATGACTTGCTGGCTGAAGACATACTTGGAAATCCTGGAAATTCTGGAAAGGGTGGTGTC TACTATTATTCGGAGAGAAATGATCGTCTAATTGACCTTGCTTCCTTCCATGACAAACTTTGGCAGGCAAGTAACCTAGGCAATGAAGTTGAGCTAAACG ATGTACGAGAGACAATTCAACAGTTGCTGAGATGGGGGTGGAAATACAATAAAAATCTGGAGGAACAAGCTGCACAACTACATATGGTTACTGCCTGGTC TCAGATTGTTGAGGTGTCTGCGTCAAGAAGATTAGCAATGCTTGAAGATCGATCTGAAATTCTATTCCAGGTTCTTGATGCATCTCTTAGTGCTTGTGCG TCTCCCGATTGTTCATTGAAGATGGCATTCATATTATCACAGAAACCTGGAATTTCCATAGGTAGCGTTGACATGCATGGCTAAACTACGAGATGAAAGG TTTTTGTTCCCTGGCAGCCTGAGTTCTGATAATATCACGTGCCTGGATCTCATTGTGGTGAAGCAATTATCCAATGGTGCTTGTCTGACCATATTATTTA AGCTCATTATGGCAATTCTTAGAAATGAATCATCAGAAGCTCTTCGGAGACGTCAATATGCCTTGCTTCTTAGCTATTTCCAGTATTGTCAAAATGTGGT TGATCCAGATGTTCCAACCACAGTGCTTCAATTCTTGCTGCTCAGTGAACAAGATAATGAATACATTGATCTGCCAAAGATTGACAAAGAGCAGGCAGAA TTGGCTCGTGCAAATTTTTCTACTTTAAGGAAAGAGGCTCAAAGCATCTTAGATTTGGTCATAAAAGATGCAACCCATGGCAGCGAACCGGGAAAGACAA TATCACTCTATGTTCTTGATGCATTGATTTGTATAGACCATGAGCGATATTTCCTGAACCAGCTTCAAAGTAGGGGCTTTTTAAGGTCATGCTTTACAGC CATAAGCAGTGTTTCAAATCAGGATGGTGGTCTTTCACTGGACTCATTGCAGAGGGCATGTACCTTTGAGGCTGAACTTGCATTACTACTAAGAATTAGT CACAAATATGAGAAATCAGGAGCACAGGTACTATTTTCTATGGGTATACTGGAGCATCTTTCTTCTGGAAGGGTAATCAGTTCACAGGGAGGTTTAAGGA GGGTTGAGACAAGACTTAGAAGAGATATGGCTAACGACATTGATCGACAACGAATGATTGTAACTCCCATTTTGAGATTAGTCTTTTCGTTAACTTCCTT GGTTGACACATCGGAGTTTTTGGAGATGAAGAATAAAATTGTTGGTGAAATAATTGATTTTGTCAAAGGGCATCAACCACTCTTCGATCATATTCTCCGT GTTGACATTGCTGAAGCAGATGACTTGAGAATGGAGCAGATCAATCTAGTTGTTGGTATTCTTAGCAAGATTTGGCCCTATGAAGAAAGCAGCGAGTATG GTTTTGTTCAAGGGCTGTTTGGCATGATGCATGCTCTTTTCTCTCGTGACTTGAAGGTTCCTAGTTTTGCTCAATCAATATCACCTAAGAATCAGAGGAA TTCAGAACTACAGATGTTTAAGTTATGCTTCAGCCTGAGTTCTTACTTATATTTTCTGGTCACAAAGAAATCATTGAGGTTGCAGTCTTCAGATGCCACC TCCAGTTACCCAACTTCCGTTGAACTTCAACAACCCACATTGAGCTTGCTTAATTCCCTTCTCACTTCTGTTACAACTGCACTTGAAAGGGCTGCTGAGG AAAAATCACTACTACTGAATAAGATACGAGACATAAATGAATTGTCAAGGCAAGAGGTGGATGAAATCATCAATATGTGTGTGCAGCAAGACTATGTTCC ATCTTCAGACAACATACATAAAAGGAGATACATTGCAATGGTAGAAATGTGTCAAGTTGTTGCTAGTTGGGATCAACAAATCATTTTGTTACTCCCTCTC TCTGAACATGTGCTGAATATCATCCTCATTCATCTTCAAGAGAGCTGTGTTGCATCTGATTCTACTTTGACCACAAAAACAATTGCATACGGTGCGAAGT ATGATCCGAAACAGGACGTCGCGTTTTTATGTGGAAAGTTAGTTCCAGACCTTGAACGACTCGAGTTACTGAGTGAGGACAAAATTGGGCGCAATCTCAA AGTATTCCACAGATTAGTAAGTTCTGCTAAAGATGTAGCAATTCAAAAGTTGGTTTTGTAGGTATATCAAATTATCCGCACACATCCAATTTTTTCCTTT AATTAACTGCTTGTGTTGTAAAATGTATCAATCTGTAAGATGTGCTCTTTAATTAGTTCTCGAGCGAGACTTGTATGATGGGTGATGTTATATCCTGTTT AATCTTGGTATATTTAAGTAGAAGTTTATGCACAATATTATATTTTACATATATCGTTGCAAAGATATGAAAGTGGGGTTGCCATTAAGTGAAATTAGTA TTATGGGAATTTAAACCTTTCCCTTTGCTGATGCCGGGTTTTACTAAACATTTAC BLAST
Tissuepods
Gene nameLI_gene_193565; 
Additional informationdetails; 

Expression of Ll_transcript_506688

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_506688
BlastpNuclear pore complex protein NUP205 from Arabidopsis with 66.51% of identity
BlastxNuclear pore complex protein NUP205 from Arabidopsis with 66.05% of identity
Eggnognuclear pore complex protein(ENOG410XSBR)
KeggLink to kegg annotations (AT5G51200)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019417065.1)
PfamNuclear pore complex scaffold, nucleoporins 186/192/205 (PF11894.7)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;