Ll_transcript_506675

Id TrinityTRINITY_DN52540_c0_g1_i3
Name TranscriptLl_transcript_506675
SequenceGAGATTCTTGCCCATCTCCTTTTCCCTAAAATCTCCAACCTTTTCCACCAAAACCCTACTCCTTCATTTCCCGCCCTACACAAATAAACCCTTGATGAAG CTTCCATCTTCTCCTTGAGCCAGCGCCCCACAACACCACACCACACCACACCAAACCCTTTTTCTCATTTCCCTCTCTCACATTGTTTCATCACTGCCAC GTGGCACCATGGTTTCTCCGAAGCAACTCCTCTCCACACTTGAATCAACGCTTCTCGGACCTTCGCCTCCAACCGCCGCGCAGCGCGTCGAACTCTTGCA CGCTATTCGCACTTCTTCACGTTCCTTCCAATCTCTTCTATCCTATTCGGACCCTAAGTCCTCTGATCTAAGTCAGGTTCAGTCTAAATCAGTTAGGCTT CCAGATTCTTCGCCTATCTCTCTCGATGACCAGGATGTCCAAATTGCACTCAAATTGAGTGATGATCTCCATGTCAATGAAGTAGATTGTGTTCGCTTGC TTGTATCAGCTAATCAAGAGTGGGGCTTAATGGGAAGGGGACCACTGGAAATTCTACGGCTTGCAGCGGGGCTCTGGTATACAGAGAGAAGAGATCTGAT AACATCCCTCCATTTGCTGTTAAGGGCTGTGGTGCTTGATCAGGGTCTAGAAGATGAAATATTAGTTGACATTCAGAAATATCTGGAACATCTTATCAAT TCTGGACTAAGACAGCGGTTGATTTCTCTTATCAAGGAACTAAATAGAGAAGAGCCTTCTGGTTTGGGTGGTCCTCAATGTGAGCATTATGTTATTGATT CAAGAGGTTCTCTTGTGGAGCGGCAGGCAGTGGTCTCTAGAGAACGACTTATTATAGGACATTGCCTTGTGCTTTCAGTCCTGGTTGTTCGGACAAGTCC AAAGGATGTGAAGGATATTTTTTCTGTTTTAAAAGATTGTGCTTCCGAAGTTAGCCAGAGCAATACCACTGTAAAACATCAGATTACCTTCAGTATTCTT TTCGCTCTTGTGGTTGCTTTTGTTTCAGATGGTTTGAGTACAGTGCCAGATAAAGCATCTGTCCTTTCTTCTAATGCTTCATTCAGACGTGAATTTCATG AACTTGTAATGGCCACTGCTAATGATCCAATTGTTGAAGGCTTTATTGGCAGCATCAGGCTTGCTTGGGTGGTACATTTGATGTTAATACAAGATGGTGT TGCATCAAGGGAAATTGTTTCAAGTGGTTCATCAAATGAAATGGGTTATCTTAGTCAATGCCTGGAAGTCATTTTCTCAACTAATGTTTTTCAGTTTTTA CTTGACAAAATTCTTCGTACTGCTGCCTACCAGAATGAAGACGAAGATATGATCTATATGTATAATGCTTATCTGCACAAGCTGATTACATGCTTCTTGT CTAATTCACTTGCGAGAGACAAGATCAAAGAATCGAAGGAGCGGACAATGAGTGTGCTTAGTCCATACCGAGTTGTTGGATCACAGGACATTAACTCAAG TTCTCAACATTGTTCTGAAATTGATGCTTTAACTTTTAATTCAGTCTTGGACTTTGTGAGCGAAATTTATCAGAAAGAACCAGAGCTCTTATCTGGAAAT GATGTGATATGGACATTTGTAAATTTTGCTGGAGAAGACCATACAAATTTCCAAACGCTTGTGGCTTTCTTAAATATGCTGAGCACCTTGGCTTCTAGTC AAGAAGGTGCTTCTAAGGTTTATGATTTATTGCATGGTAAAGCATTCCGCTCAATTGGGTGGAGCACTTTGTTTGAATGCTTAGCAATTTATGATGAGAA ATTCAAACAGTCTCTTCAAACTGCTGGAGCGATGTTGCCTGAAATTCAGGAGGGGGATGCAAAAGCACTTGTGGCATACTTAAACGTTCTAAAGAAGGTT GTGGAAAATGGGAATCCAATAGAAAGGAAAAACTGGTTTCCTGATATTGAAGCATTGTTCAAGCTTCTTAGTTATGAAAACGTACCCCCATATCTTAAGG GTGCTCTAAGGAGTGCAATAGCCACATTCATTCCTGTCTCTCCAGTATTGAAGGATAGCATTTGGACCTATCTTGAACAATATGATCTGCCAGTTGTTGG GCCTGATGTCCAGAACAGTCAACAGCCCATGGCTACTCAGGTTTATGATATGCAATTTGAACTAAACGAAATTGAAGCAAGGAGAGAGCAATATCCTTCA ACTATATCTTTCCTTAATTTGATAAATGCTCTTATTGCAGAAGAAAGAGATTTGAGTGATAGAGGGAGAAGATTTATTGGCATCTTTAGGTTCATCTATG ATCATGTTTTTGGGCCATTTCCTCAGAGAGCTTATGCAGATCCCTGTGAAAAGTGGCAGTTAGTTGGTGCTTGCCTTCAACATTTTCACATGATGCTAAA CATGTATGATGTCAAGAATGAGGACTTTGAGGATGTAGGTGATCAGTCAAGACTTTCAACAACTAAGGAATCATCACCATTTCAGACGCAACTTCCTGTT TTAGAATTGCTTAAAGATTTCATGAGTGGTAAGACTGCCTTTCGGAACATAATGGGTATTCTTCTGCCAGGAGTTAATTCCATCATTGCTGAACGCAATA GTCAAATATATGGGCCGCTTCTGGAGAATGCAGTTCAGCTTTCTCTGGAAATTATAATACTAGTGCTTGAAAAGGATTTGCTTCTTTCTGATTATTGGCG TCCTCTATACCAGCCATTGGATATTATACTCTCCCATGATCACAGTCAAATAGTGGCTTTGTTGGAGTATGTCAGATATGATTTTCAGCCTAAAGTTCAG CAGTCCTCTATCAAAATCATGAGTATTTTAAGCTCTCGCATGGTTGGGCTCGTTCAGCTATTGCTAAAATCTGGTGCTGCAAATAGCTTGATAGAAGATT ATGCAGCATGCCTTGAGTTGCGGTCAGGAGAGTGTCAGACTGTTGAAAATAATACTGATGATCCAGGCATTCTTATCATTCAACTTTTAATCGACAACAT CAGCAGGCCAGCTCCAAATATCACCCATTTACTACTTAAATTTGATCTTGACATGCCTGTTGAACGGACAGTTTTACAGCCTAAGTTTTATTACAGTTGC ATGAAGGTTATTCTTGATATGCTGGAGAACCTTTTAAAGCCTGATGTAAATGCATTACTTCATGAATTTGGTTTTCAGCTCCTTTATGAGTTATGCGTAG ATCCACTAACATGTGAGCCAACAATGGATCTGTTGTCAAATAAAAAGTACCATTTCTTTATTAAGCACCTTGATGCAATTGGTATTGCTCCGCTTCCCAA ACGGAATAGTAACCAGCCACTCCGTATCAGTTCCCTCCATCAGAGAGCTTGGCTCCTAAAACTTTTAGCCGTTGAACTACATGCTGGTGATGTTAGTAGC TCCACACATAGAGAAGCATGTCAAACAATCCTTTCTCATCTTTTTGGGCAAGATGTCCTTAAAATTGATGGTGGTCAGGCCATGTCTCCATTTTCGCTTC AAGCTACATATGAAAATGCTGGTATAAGAACTGTCAGTAAGAGTAAGGTATTAGAATTGCTTGAAATCATTCAGTTTAGATGTCCAAATACCTCTACTAA GCTCTCAAATATTGTGGCTGGTATGAAGTATGACTTGCTGGCTGAAGACATACTTGGAAATCCTGGAAATTCTGGAAAGGGCGGTGTCTACTATTTTTCT GAGAGAAATGACCGTCTAATTGACCTTGCTTCCTTCCATGACAAACTTTGGCAGAAATATAATTCTGCATATATCCAGGTGAGTAACCTGGGCAGTGAAG TTGAGCTAAATGACGTACGGGAGACAATTCAACAGTTGCTGAGATGGGCTTGGAAATACAATAAAAATCTGGAGGAACAAGCAGCACAGCTACATATGGT TACTGCCTGGTCTCAGATTGTTGAGGTTTCTGCTTCTAGAAGATTAACCATGCTTGAAGGTCGATCTGAAATTCTATTTCAGGTCCTTGATGCATCTCTT AGTTCTTGTGCATCTCCAGACTGTTCATTGAGGATGGCGTTCATACTATCACAGGTCGCATTGACATGCATGGCTAAACTACGAGATGAAAGGTTTTTAT TCCCGGGCAGTCTGAATTCTGATAATATCACGTGCCTTGATCTCATTGTGGTGAAGCAATTACCGAATGGTGCTTGTCTAACCATATTGTTTAAGCTTAT TATGGCAATACTAAGAAACGAGTCATCAGAAGCTCTTCGGAGACGTCAATATGCCTTGCTTCTTAGCTATTTCCAGTATTGTCAAAATGTGGTAGATCCA GATGTTCCAACCACAGTTCTTCAATTCTTGCTGCACATTGAACAAGATAATGAGTATATTGATCTACCAAAGATTGACAAAGATCAAGCAGAACTGGCTC GTGCAAATTTTTATACTTTAAGGAAAGAGGCTCAGAGCGTCTTGGATTTGGTCATAAAAGATGCAACCCATGGCAGCGAACCGGGAAAGACAATATCACT CTATGTTCTTGATGCATTGATTTGTATAGATCATGAGCGGTATTTCTTGAACCAGCTTCAAAGCAGGGGCTTTTTAAGGTCTTGCTTTACAGCCATAAGC AGTGTTTTGAATCAGGATGGTGGTCTTTCACTGGACTCATTGCAGAGGGCTTGTACCTTTGAGGCTGAACTTGGTTTACTACTAAGAATAAGTCACAAAT ATGGGAAATCAGGAGCACAAGTACTACTTTCTATGGGTATACTGGAGCATCTTTCTTCTGGAAGGGTAATCAATTTACAGGGTGGTTTAAGGAGGGTTGA GACGAGACTTAGAAGAGATATGGCTGTCGATGTTGATAGACAGCGAATGATTGTAACTCCTATTTTGAGATTGGTCTATTCATTAACTTCCTTGGTTGAT ACCTCAGAGTTTCTTGAGGTGAAGAATAAAATTGTCCGTGAGGTAATTGATTTTGTCAAAGGACATCAACCACTCTTTGATCATGTTCTCCGTGTAGACG TTGTGGAAGCAGATGAGTTAAGCATGGAACAGATCAATATAGTTGTTGGTATCCTCAGCAAGATTTGGCCATATGAAGGAAGCGATGAGTATGGTTTTGT TCAAGGGCTTTTTGGCATGATGCGTGCTCTTTTCTCTCGTGACTTGAAGGTTCCTAGTTTTGCTCAATCAATATCACCTGACAATCAGAGGAATTCAGAA CTACAGATCTTTAAGTTATGCTTCAGCCTGAGCTCTTACTTATATTTTTTAGTCACAAAGAAATCTCTGAGATTGCAGCATTCAGATGCCTCCTCCAGCT ACTCTACTTCCATTGAACTCCAACAACCGACATTGACCGTGCTTATTTCTCTTCTTGCTTCGGTTACAACTGCACTTGAAAGGGCTGCTGAGGAGAAATC ATTACTACTGAATAAGATTCGAGACATAAATGAATTGTCAAGGCAAGAGGTGGATGAAATCATCAATATGTGTGTGCAGCAAGACTCTGTTCCATCTTCG GACAACATACATAAAAGGCGATACATTGCAATGGTAGAAATGTGTCGAGTTGTTGCTAGTAGGGATCAGCTAATCATTTTGTTGCTCCCACTCTCCGAAC ATGTGCTGAATATTGTCCTCATCCATCTTGAAGAAAGCTCTGTTGCATCTGATTCTACCTTGACCACAAAAACAATTACATATGGTCCAAAGTATGACCA TAAGCAGGATATTGCATCGTTATGTGGGAAGTTAATTCCAACTCTTGAACGACTCGAGTTACTGAGTGAGGAGAAAGTTGGGCACAATCTCAAAGTATTC CACAGATTAGCAACTTCCGCTAAAGAGATAGCAATTCAAAAGTACGCTTTGTAGATATATTAAAGTATCTGTAACATTACATTTTTTCCTTTATTTAACT GCATGTGTATTGTAAAATGTATCAAGTATATTTAGATTTGTAGCATTATTGACTTCAATTTGTAAGAAGATATAAGAACTTTTGTACATCTAGTAATTAT GAGAAGTTTTAACCTTTCAAATTGTGGATTAGGAATGACAATGAGGTGGATAGAGTTGGATTTGTGCTTACCTAATCCTGAAATTTAAAATCTGAACAAC TTGAATTAAAAGCTAC BLAST
Tissuepods
Gene nameLI_gene_193565; 
Additional informationdetails; 

Expression of Ll_transcript_506675

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_506675
BlastpNuclear pore complex protein NUP205 from Arabidopsis with 65.31% of identity
BlastxNuclear pore complex protein NUP205 from Arabidopsis with 65.25% of identity
Eggnognuclear pore complex protein(ENOG410XSBR)
KeggLink to kegg annotations (AT5G51200)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419243.1)
PfamNuclear pore complex scaffold, nucleoporins 186/192/205 (PF11894.7)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;