Ll_transcript_506677

Id TrinityTRINITY_DN52540_c0_g1_i5
Name TranscriptLl_transcript_506677
SequenceGAGATTCTTGCCCATCTCCTTTTCCCTAAAATCTCCAACCTTTTCCACCAAAACCCTACTCCTTCATTTCCCGCCCTACACAAATAAACCCTTGATGAAG CTTCCATCTTCTCCTTGAGCCAGCGCCCCACAACACCACACCACACCACACCAAACCCTTTTTCTCATTTCCCTCTCTCACATTGTTTCATCACTGCCAC GTGGCACCATGGTTTCTCCGAAGCAACTCCTCTCCACACTTGAATCAACGCTTCTCGGACCTTCGCCTCCAACCGCCGCGCAGCGCGTCGAACTCTTGCA CGCTATTCGCACTTCTTCACGTTCCTTCCAATCTCTTCTATCCTATTCGGACCCTAAGTCCTCTGATCTAAGTCAGGTTCAGTCTAAATCAGTTAGGCTT CCAGATTCTTCGCCTATCTCTCTCGATGACCAGGATGTCCAAATTGCACTCAAATTGAGTGATGATCTCCATGTCAATGAAGTAGATTGTGTTCGCTTGC TTGTATCAGCTAATCAAGAGTGGGGCTTAATGGGAAGGGGACCACTGGAAATTCTACGGCTTGCAGCGGGGCTCTGGTATACAGAGAGAAGAGATCTGAT AACATCCCTCCATTTGCTGTTAAGGGTACTTTCTTCCTGCCCAGGGCATCATTCAGGCTGTGGTGCTTGATCAGGGTCTTGAAGATGATATATTGGTTGA CATTCAGAAATATCTGGAACATCTTATCAATTCTGGACTAAGACAGCGGTTGATTTCTCTTATCAAGGAACTCAATAGAGAAGATTCTTCTGGTTTGGGT GGTCCCCAGTGTGAGCCTTACATTCTTGATTCAAGAGGTTCTCTTGTGGAGCGGCGGGCAGTGGTCTCTAGAGAAAGACTTATTATTGGACATTGCCTTG TCCTTTCAGTTTTGGTTGTTCGGACAAGTCCAAAGGATGTGAAGGATATTTTTTCTGTTTTAAAAGATTGTGCTTCCGAAGTCAGTGTGTGCAATACCAC GGTAAAACATCAGATTACCTTCAGTCTTCTTTTTGCTCTTGTGGTTGCATTTGTTTCAGATGGTTTGAGTACAGTGCCGGATAAAGCATCTATACTTTCT TCTGATGCTTCCTTCAGACGTGAATTTCATGAACTTGTAATGGCTACCGGAAATGATCCAGTTGTTGAAGGCTTCATTGGTGGCATTAGACTTGCTTGGG TGGTACATTTGATGTTAATACAAGATGGTGTTGCAGCAAGGGAGACTGTTTCAAGTGGTTCATCAAATGAAATGGGTTATCTCAGTCAATGCTTGGATGT CATTTTCTCAACTAACAGTTTTCAATTTTTATTGGACAAAGTTCTTCACACAGCTTCTTACCAGAATGAAGATGAAGATATGATCTACATGTATAATGCT TATCTTCACAAGCTGATCACCTGCTTCTTGTCTAATTCACTTGCGAGAGACAAGATAAAAGAATCCAAGGAGCGGACAATGAGTGTGCTTAGTCCATACC GAGTTGTTGGATCACATGATTTTGCACAGGACAGGAACTCAAGTTCTCAACATGGCTCTGACATGGGTGCTTTAACATTTAATTCAATATTGGACTTTGT GAGCGAAATTTATCAGAAAGAACCAGAGCTGTTGTCTGGAAATGATGTGTTGTGGACATTTGTAAATTTTGCCGGAGAAGACCATACAACCTTCCAAACA CTTGTGGCTTTCTTAAATATGCTGAGCACCTTGGCTTCTAGTCAAGAAGGTGCTTCTAAGGTTTATGAGTTGCTGCAAGGTAAAGCATTCCGCTCAATTG GGTGGAGCACTTTGTTTGAATGCTTAACAATTTATGATGATAAATTCAAACAGTCTCTTCAAACTGCTGGAGCGATGTTGCCTGACATTCAGGAGGGGGA TGCAAAAGCCCTCGTGGCATACTTAAATGTTCTGAAGAAGGTTGTAGAAAATGGGAACCCAATAGAAAGGAAAAACTGGTTTCCTGATATTGAACCATTG TTCAAGCTTCTTAGTTACGAAAATGTACCCCCATATCTTAAGGGTGCTCTACGGAATGCAATAGCCACATTTATTCATGTCTCTCCAGTGTTGAAGGATA GCATTTGGACCTATCTTGAACAATATGACCTGCCAGTAGTTGTTGGGACAAATGTCCAGAATACTCAACAACCCGTGGGTACTCAGGTTTATGATATGCA ATTTGAATTGAACGAAATCGAAGCAAGGAGAGAGCAATATCCTTCAACTATATCTTTTCTTAATTTGATAAATGCTCTTGTTGCAGAAGAAAGAGATTTG AGTGATAGAGGGCGAAGATTTATTGGCATATTTAGGTTCATATATGATCATGTTTTTGGGCCATTTCCTCAGAGAGCCTATGCAGATCCTTGTGAAAAGT GGCAGTTGGTTGGTGCTTGCCTTCAACATTTTCGCATGATATTAACCATGTATGATGTCAAGGATGAGGACTTTGAGGGTATAGTTGACCAGTCACGACT TTCAACAACGAAAGAATCATCACCACTTCAGACACAACTTCCTGTATTAGAATTGCTTAAAGATTTCATGAGTGGTAAGACTGCATTTCGGAACATTATG GGTATTCTTCTACCAGGAGTGAATTCCATCATTGCTGAACGCAGTAGTCAAATATATGGGCAGCTTTTGGAGAATGCAGTTCAGCTTTCTCTGGAAATTA TAATACTAGTGCTTGAAAAAGATTTACTTCTTTCTGATTATTGGCGTCCTCTATACCAGCCATTGGATATTATACTCTCCCATGATCACAGTCAAATAGT GGCTTTGTTGGAGTATGTCAGATATGATTTTCAGCCAAAAATTCAGCAGTCCTCTATCAAAATCATGAGTATTCTAAGCTCTCGGATGGTTGGGCTCGTT CAGCTATTGCTAAAATCTAATGCTGCAAACAGTTTGATAGAAGATTATGCAGCCTGCCTTGAGTTGCGGTCAGAAGAATCTCAGACAGTTGAAAATAACA CTGATGATCCAGGCATTCTTATTATGCAACTTTTAATTGACAACATCAGCAGGCCAGCTCCAAATATCACTCATTTACTACTTAAATTTGATCTAGACAT GCCTGTTGAGCGAACAGTTTTACAGCCTAAGTTTTATTACAGTTGCATGAAGGTTATTCTTGATATGCTGGAGAACCTTTTAAAGCCTGATGTGAATGCA TTGCTTCATGAATTTGGTTTTCAGCTACTTTATGAACTATGCATTGATCCACTAACATGTGAACCTACAATGGATTTGTTATCAAATAAAAAGTACCATT TCTTTATTAAGCACCTTGATACAATTTGTATTGCTCCACTTCCTAAACGGAATAGTAACCAGCCTCTTCGTATCAGTTCGCTTCATCAGAGAGCATGGCT TTTAAAACTTTTAGCTGTTGAACTACATGCTGGTGATGTTAGTAGCTCCACACATAGAGAAGCATGTCAAACAATCCTCTCTCACCTTTTTGGACAAGAT ATGCTTGAAATTGGTGGAGGGCAGGCTATGTCTCCATTTTCGCTTCAAGCTACTTATGAAAATGCTGCTATAAGAACTGTCAGTAAGAGTAAGGTATTAG AATTGCTAGAAATTATCCAGTTTAGATGTCCAGATGCTTCTAAGCTCTCAAATATTGTGGCTGGTATGAAGTATGACTTGCTGGCTGAAGACATACTTGG AAATCCTGGAAATTCTGGAAAGGGTGGTGTCTACTATTATTCGGAGAGAAATGATCGTCTAATTGACCTTGCTTCCTTCCATGACAAACTTTGGCAGGCA AGTAACCTAGGCAATGAAGTTGAGCTAAACGATGTACGAGAGACAATTCAACAGTTGCTGAGATGGGGGTGGAAATACAATAAAAATCTGGAGGAACAAG CTGCACAACTACATATGGTTACTGCCTGGTCTCAGATTGTTGAGGTGTCTGCGTCAAGAAGATTAGCAATGCTTGAAGATCGATCTGAAATTCTATTCCA GGTTCTTGATGCATCTCTTAGTGCTTGTGCGTCTCCCGATTGTTCATTGAAGATGGCATTCATATTATCACAGGTAGCGTTGACATGCATGGCTAAACTA CGAGATGAAAGGTTTTTGTTCCCTGGCAGCCTGAGTTCTGATAATATCACGTGCCTGGATCTCATTGTGGTGAAGCAATTATCCAATGGTGCTTGTCTGA CCATATTATTTAAGCTCATTATGGCAATTCTTAGAAATGAATCATCAGAAGCTCTTCGGAGACGTCAATATGCCTTGCTTCTTAGCTATTTCCAGTATTG TCAAAATGTGGTTGATCCAGATGTTCCAACCACAGTGCTTCAATTCTTGCTGCTCAGTGAACAAGATAATGAATACATTGATCTGCCAAAGATTGACAAA GAGCAGGCAGAATTGGCTCGTGCAAATTTTTCTACTTTAAGGAAAGAGGCTCAAAGCATCTTAGATTTGGTCATAAAAGATGCAACCCATGGCAGCGAAC CGGGAAAGACAATATCACTCTATGTTCTTGATGCATTGATTTGTATAGACCATGAGCGATATTTCCTGAACCAGCTTCAAAGTAGGGGCTTTTTAAGGTC ATGCTTTACAGCCATAAGCAGTGTTTCAAATCAGGATGGTGGTCTTTCACTGGACTCATTGCAGAGGGCATGTACCTTTGAGGCTGAACTTGCATTACTA CTAAGAATTAGTCACAAATATGAGAAATCAGGAGCACAGGTACTATTTTCTATGGGTATACTGGAGCATCTTTCTTCTGGAAGGGTAATCAGTTCACAGG GAGGTTTAAGGAGGGTTGAGACAAGACTTAGAAGAGATATGGCTAACGACATTGATCGACAACGAATGATTGTAACTCCCATTTTGAGATTAGTCTTTTC GTTAACTTCCTTGGTTGACACATCGGAGTTTTTGGAGATGAAGAATAAAATTGTTGGTGAAATAATTGATTTTGTCAAAGGGCATCAACCACTCTTCGAT CATATTCTCCGTGTTGACATTGCTGAAGCAGATGACTTGAGAATGGAGCAGATCAATCTAGTTGTTGGTATTCTTAGCAAGATTTGGCCCTATGAAGAAA GCAGCGAGTATGGTTTTGTTCAAGGGCTGTTTGGCATGATGCATGCTCTTTTCTCTCGTGACTTGAAGGTTCCTAGTTTTGCTCAATCAATATCACCTAA GAATCAGAGGAATTCAGAACTACAGATGTTTAAGTTATGCTTCAGCCTGAGTTCTTACTTATATTTTCTGGTCACAAAGAAATCATTGAGGTTGCAGTCT TCAGATGCCACCTCCAGTTACCCAACTTCCGTTGAACTTCAACAACCCACATTGAGCTTGCTTAATTCCCTTCTCACTTCTGTTACAACTGCACTTGAAA GGGCTGCTGAGGAAAAATCACTACTACTGAATAAGATACGAGACATAAATGAATTGTCAAGGCAAGAGGTGGATGAAATCATCAATATGTGTGTGCAGCA AGACTATGTTCCATCTTCAGACAACATACATAAAAGGAGATACATTGCAATGGTAGAAATGTGTCAAGTTGTTGCTAGTTGGGATCAACAAATCATTTTG TTACTCCCTCTCTCTGAACATGTGCTGAATATCATCCTCATTCATCTTCAAGAGAGCTGTGTTGCATCTGATTCTACTTTGACCACAAAAACAATTGCAT ACGGTGCGAAGTATGATCCGAAACAGGACGTCGCGTTTTTATGTGGAAAGTTAGTTCCAGACCTTGAACGACTCGAGTTACTGAGTGAGGACAAAATTGG GCGCAATCTCAAAGTATTCCACAGATTAGTAAGTTCTGCTAAAGATGTAGCAATTCAAAAGTTGGTTTTGTAGGTATATCAAATTATCCGCACACATCCA ATTTTTTCCTTTAATTAACTGCTTGTGTTGTAAAATGTATCAATCTGTAAGATGTGCTCTTTAATTAGTTCTCGAGCGAGACTTGTATGATGGGTGATGT TATATCCTGTTTAATCTTGGTATATTTAAGTAGAAGTTTATGCACAATATTATATTTTACATATATCGTTGCAAAGATATGAAAGTGGGGTTGCCATTAA GTGAAATTAGTATTATGGGAATTTAAACCTTTCCCTTTGCTGATGCCGGGTTTTACTAAACATTTAC BLAST
Tissuepods
Gene nameLI_gene_193565; 
Additional informationdetails; 

Expression of Ll_transcript_506677

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_506677
BlastpNuclear pore complex protein NUP205 from Arabidopsis with 65.87% of identity
BlastxNuclear pore complex protein NUP205 from Arabidopsis with 65.58% of identity
Eggnognuclear pore complex protein(ENOG410XSBR)
KeggLink to kegg annotations (AT5G51200)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019417065.1)
PfamNuclear pore complex scaffold, nucleoporins 186/192/205 (PF11894.7)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;